Cow genome map

Conread name: Ss1.1-Utr1-UTR010004F02.5

Conread position: 1-83
Cow position: chr1:37309646-37309728 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr1:52488098-52488183 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-88
Cow position: chr1:78794871-78794958 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr1:52052839-52052932 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr1:84786639-84786542 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr1:98577342-98577248 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr1:78030617-78030712 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 90

Conread position: 1-97
Cow position: chr1:31348576-31348672 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr1:38418944-38418844 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-97
Cow position: chr1:73584538-73584633 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-97
Cow position: chr1:75744725-75744629 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr1:3923930-3924026 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 1-98
Cow position: chr1:10778436-10778342 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-98
Cow position: chr1:19545234-19545331 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 91

Conread position: 1-98
Cow position: chr1:22728916-22728815 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr1:25281811-25281908 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr1:29451741-29451642 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr1:32631330-32631234 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-98
Cow position: chr1:43389183-43389280 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr1:52753301-52753398 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr1:57264126-57264218 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-98
Cow position: chr1:62996359-62996263 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr1:80988211-80988114 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr1:81563601-81563501 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 65

Conread position: 1-98
Cow position: chr1:87216326-87216231 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-98
Cow position: chr1:90864431-90864532 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-98
Cow position: chr1:93528559-93528458 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position: chr1:95071850-95071754 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr1:3035128-3035226 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:4374474-4374571 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr1:11914013-11914110 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr1:20002371-20002469 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:20204892-20204793 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr1:21954353-21954451 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:22467795-22467697 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:22827032-22826936 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr1:30504339-30504238 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 94

Conread position: 1-99
Cow position: chr1:31499491-31499394 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position: chr1:33717090-33716988 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr1:33719982-33719881 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 94

Conread position: 1-99
Cow position: chr1:36874879-36874782 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1-99
Cow position: chr1:37886918-37887020 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr1:38278181-38278278 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 1-99
Cow position: chr1:44506832-44506735 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 1-99
Cow position: chr1:46939994-46940095 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position: chr1:49839372-49839273 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 92
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr1:51445744-51445646 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:51628633-51628735 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position: chr1:52994892-52994791 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr1:57305697-57305599 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:57637237-57637139 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:57639652-57639753 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr1:61564661-61564558 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr1:67821345-67821443 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:75967296-75967203 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr1:78783411-78783313 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:79002091-79002187 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-99
Cow position: chr1:79844331-79844236 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr1:81180111-81180213 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr1:91816905-91817007 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr1:92963263-92963165 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:95056920-95056822 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:95215317-95215419 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr1:96712949-96713047 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr1:98397351-98397448 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr1:100400337-100400434 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr1:100512460-100512363 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr1:40531249-40531344 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-101
Cow position: chr1:53374296-53374200 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-102
Cow position: chr1:6941330-6941230 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr1:6958743-6958643 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr1:53520772-53520670 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 1-102
Cow position: chr1:63905606-63905710 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 49

Conread position: 1-102
Cow position: chr1:69678457-69678562 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-102
Cow position: chr1:85596808-85596707 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 37

Conread position: 1-103
Cow position: chr1:98023529-98023633 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-107
Cow position: chr1:4027730-4027620 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-107
Cow position: chr1:86113546-86113653 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 43

Conread position: 1-108
Cow position: chr1:68817934-68818038 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-108
Cow position: chr1:94404077-94403972 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 100, 14

Conread position: 1-109
Cow position: chr1:79663797-79663908 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 106

Conread position: 1-109
Cow position: chr1:81515108-81514995 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-109
Cow position: chr1:94378897-94378790 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 41

Conread position: 1-110
Cow position: chr1:55229849-55229740 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chr1:73960570-73960455 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1-112
Cow position: chr1:76222826-76222936 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 1-116
Cow position: chr1:64804239-64804360 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-120
Cow position: chr1:84240760-84240647 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-131
Cow position: chr1:45289007-45289137 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 81

Conread position: 1-133
Cow position: chr1:54484936-54484801 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position: chr1:1053453-1053321 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 1-134
Cow position: chr1:1956463-1956597 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 103

Conread position: 1-134
Cow position: chr1:3752077-3752210 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 103

Conread position: 1-134
Cow position: chr1:35162272-35162137 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 94

Conread position: 1-134
Cow position: chr1:42053460-42053592 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 1-134
Cow position: chr1:43380163-43380296 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 103

Conread position: 1-134
Cow position: chr1:43822242-43822110 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 91

Conread position: 1-134
Cow position: chr1:52039501-52039370 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr1:52496646-52496509 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 107

Conread position: 1-134
Cow position: chr1:53207828-53207962 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 104

Conread position: 1-134
Cow position: chr1:55163790-55163655 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 103

Conread position: 1-134
Cow position: chr1:57956993-57957125 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr1:71748142-71748274 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr1:72813276-72813148 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-134
Cow position: chr1:79590969-79590833 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position: chr1:81913283-81913419 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 106

Conread position: 1-134
Cow position: chr1:82504831-82504700 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr1:96964185-96964052 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-135
Cow position: chr1:42874082-42874215 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-152
Cow position: chr1:24597521-24597369 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 127

Conread position: 1-155
Cow position: chr1:71045619-71045470 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-156
Cow position: chr1:57900874-57901036 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 2-88
Cow position: chr1:55194601-55194686 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 2-89
Cow position: chr1:71952951-71952864 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-91
Cow position: chr1:68845622-68845711 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-96
Cow position: chr1:57396063-57396158 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 2-97
Cow position: chr1:72286190-72286280 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 2-98
Cow position: chr1:34159698-34159600 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 92

Conread position: 2-99
Cow position: chr1:15547332-15547236 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr1:52510379-52510476 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr1:76938134-76938230 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 2-100
Cow position: chr1:97611789-97611887 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-101
Cow position: chr1:98708306-98708207 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-117
Cow position: chr1:102784827-102784711 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 5

Conread position: 2-133
Cow position: chr1:24655825-24655697 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 82

Conread position: 2-134
Cow position: chr1:41004504-41004634 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 5

Conread position: 2-134
Cow position: chr1:48105570-48105700 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 3-93
Cow position: chr1:31414096-31414186 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position: chr1:88618460-88618364 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 3-97
Cow position: chr1:33081161-33081255 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr1:42360134-42360035 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 3-97
Cow position: chr1:99136568-99136661 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 3-98
Cow position: chr1:95050237-95050332 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr1:19998173-19998268 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr1:20384757-20384854 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 3-99
Cow position: chr1:57635328-57635234 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-101
Cow position: chr1:81355841-81355938 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 3-102
Cow position: chr1:55357423-55357522 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr1:39418259-39418371 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 3-134
Cow position: chr1:41138490-41138621 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 90

Conread position: 3-134
Cow position: chr1:69264683-69264555 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 4-97
Cow position: chr1:68827044-68827136 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 87
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 5-89
Cow position: chr1:87072565-87072481 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-95
Cow position: chr1:11873497-11873586 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 83
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-97
Cow position: chr1:78809743-78809652 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr1:21460727-21460635 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr1:635051-634958 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr1:10942232-10942325 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr1:10964154-10964061 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr1:15311732-15311635 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 6-99
Cow position: chr1:56229114-56229021 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr1:94226688-94226781 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-102
Cow position: chr1:39702689-39702594 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 6-107
Cow position: chr1:4293922-4293823 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-108
Cow position: chr1:27980808-27980909 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 6-127
Cow position: chr1:44836370-44836492 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 85

Conread position: 6-134
Cow position: chr1:68217499-68217627 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 98

Conread position: 7-98
Cow position: chr1:16767226-16767317 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr1:3776755-3776847 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-109
Cow position: chr1:94212092-94211992 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 7-134
Cow position: chr1:53595184-53595058 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 8-99
Cow position: chr1:67916894-67916803 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 79

Conread position: 8-134
Cow position: chr1:1981249-1981379 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 110

Conread position: 9-99
Cow position: chr1:42887408-42887496 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 9-99
Cow position: chr1:71253696-71253788 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 9-101
Cow position: chr1:4619014-4619104 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 9-102
Cow position: chr1:13637816-13637907 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 10-99
Cow position: chr1:20799729-20799639 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 11-99
Cow position: chr1:98741536-98741448 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-95
Cow position: chr1:1991572-1991654 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr1:26934688-26934773 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:29671671-29671757 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:36920780-36920866 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:42968465-42968551 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:46693804-46693889 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 13-99
Cow position: chr1:55146654-55146568 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 81
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:56748442-56748357 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 80
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position: chr1:71818609-71818695 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:81579615-81579530 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 13-99
Cow position: chr1:82861627-82861540 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 13-99
Cow position: chr1:84239254-84239340 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr1:84812084-84812170 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr1:72035077-72035164 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 13-102
Cow position: chr1:98551565-98551477 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 13-134
Cow position: chr1:61176036-61175916 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 15-99
Cow position: chr1:30034396-30034313 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 77
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 15-132
Cow position: chr1:56225326-56225210 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 15-133
Cow position: chr1:39427131-39427246 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 17-105
Cow position: chr1:5289312-5289224 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr10:41737140-41737053 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr10:29252000-29251908 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-90
Cow position: chr10:33194856-33194766 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-92
Cow position: chr10:50183214-50183304 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-93
Cow position: chr10:29589006-29589100 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-95
Cow position: chr10:6173194-6173100 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr10:16740223-16740316 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-95
Cow position: chr10:36896239-36896145 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr10:37822889-37822987 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-97
Cow position: chr10:11317865-11317769 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr10:28670986-28671085 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position: chr10:35862392-35862492 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position: chr10:59141262-59141166 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr10:61305115-61305020 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-98
Cow position: chr10:77224-77127 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr10:805033-804932 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr10:3998743-3998642 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr10:15817958-15818059 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr10:18042019-18041922 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 91
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr10:28176555-28176656 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr10:29628114-29628213 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-98
Cow position: chr10:37444382-37444479 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr10:37529431-37529532 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-98
Cow position: chr10:43438704-43438607 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:889455-889557 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:2304544-2304640 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-99
Cow position: chr10:5264534-5264437 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr10:6719736-6719638 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:8923773-8923671 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:10699676-10699774 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:10752143-10752244 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr10:15293109-15293008 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 67

Conread position: 1-99
Cow position: chr10:19895233-19895136 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr10:20132694-20132791 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-99
Cow position: chr10:20446929-20446836 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position: chr10:23936319-23936220 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 92

Conread position: 1-99
Cow position: chr10:24548092-24547995 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr10:26608050-26608152 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:29360742-29360644 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:30460483-30460381 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:31401060-31401162 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:32503282-32503187 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr10:34300341-34300244 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr10:34554254-34554352 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:35026313-35026216 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 14

Conread position: 1-99
Cow position: chr10:35715874-35715974 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:35767248-35767342 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr10:37287339-37287441 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr10:39646270-39646368 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:42230495-42230401 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:42745750-42745649 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 89

Conread position: 1-99
Cow position: chr10:43451081-43451183 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr10:51289092-51288991 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr10:51306164-51306063 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 94

Conread position: 1-99
Cow position: chr10:53674662-53674559 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr10:54936278-54936376 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:56828483-56828584 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr10:57457170-57457068 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:57736326-57736428 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr10:58259681-58259779 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr10:60032740-60032839 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 80

Conread position: 1-99
Cow position: chr10:61588428-61588525 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-100
Cow position: chr10:26967850-26967950 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-100
Cow position: chr10:32093637-32093538 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr10:13586548-13586448 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr10:44681351-44681251 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 5

Conread position: 1-102
Cow position: chr10:1978825-1978930 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-102
Cow position: chr10:6516348-6516453 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr10:28105243-28105339 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-102
Cow position: chr10:35857220-35857321 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 72

Conread position: 1-102
Cow position: chr10:42312746-42312641 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-102
Cow position: chr10:44771490-44771389 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr10:48369770-48369875 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr10:49569039-49568937 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr10:52296335-52296231 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 94

Conread position: 1-102
Cow position: chr10:56835115-56835012 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-107
Cow position: chr10:24153164-24153270 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position: chr10:65132793-65132687 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-108
Cow position: chr10:16598521-16598416 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-112
Cow position: chr10:49169219-49169332 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 94

Conread position: 1-112
Cow position: chr10:64182285-64182175 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 12

Conread position: 1-113
Cow position: chr10:22049090-22048975 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 106

Conread position: 1-113
Cow position: chr10:58718491-58718373 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-114
Cow position: chr10:35802534-35802647 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 103

Conread position: 1-131
Cow position: chr10:30456018-30456150 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 67

Conread position: 1-133
Cow position: chr10:14817327-14817460 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 82

Conread position: 1-133
Cow position: chr10:24870999-24870868 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 1-133
Cow position: chr10:35753122-35753256 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 106

Conread position: 1-134
Cow position: chr10:19094481-19094350 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-134
Cow position: chr10:19503639-19503771 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 63

Conread position: 1-134
Cow position: chr10:25509534-25509401 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 103

Conread position: 1-134
Cow position: chr10:29188527-29188658 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr10:30914331-30914199 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr10:31362373-31362507 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 53

Conread position: 1-134
Cow position: chr10:31466582-31466446 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position: chr10:41397314-41397183 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr10:47158941-47158808 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 103

Conread position: 1-134
Cow position: chr10:52569426-52569297 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-134
Cow position: chr10:56080336-56080470 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position: chr10:58235102-58234972 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-135
Cow position: chr10:37528771-37528906 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 29

Conread position: 1-167
Cow position: chr10:17983017-17982850 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 90

Conread position: 2-93
Cow position: chr10:9526241-9526332 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-94
Cow position: chr10:9445180-9445272 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-95
Cow position: chr10:17584192-17584289 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-96
Cow position: chr10:2449186-2449092 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-97
Cow position: chr10:28721623-28721529 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 2-98
Cow position: chr10:33891254-33891350 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr10:13765331-13765427 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 2-120
Cow position: chr10:9798364-9798477 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 2-127
Cow position: chr10:1416064-1415942 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 2-134
Cow position: chr10:34906544-34906411 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 103

Conread position: 3-98
Cow position: chr10:9576203-9576302 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr10:4311020-4310924 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr10:23912664-23912760 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr10:43288037-43288133 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 91
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr10:59152031-59152127 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 29

Conread position: 3-99
Cow position: chr10:69934945-69935041 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-101
Cow position: chr10:49846608-49846510 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr10:38725492-38725376 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 3-134
Cow position: chr10:13368180-13368053 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-134
Cow position: chr10:52152355-52152225 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 4-96
Cow position: chr10:59588336-59588428 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 85
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chr10:19402766-19402672 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 4-99
Cow position: chr10:34673726-34673635 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 4-106
Cow position: chr10:63628045-63627943 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 100

Conread position: 5-99
Cow position: chr10:26209430-26209525 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 5-102
Cow position: chr10:12392769-12392870 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 6-97
Cow position: chr10:36489848-36489758 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-98
Cow position: chr10:41408116-41408024 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr10:41803067-41803159 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr10:20735537-20735443 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position: chr10:56475298-56475205 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr10:61600388-61600480 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 7-99
Cow position: chr10:49456248-49456340 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-113
Cow position: chr10:48377818-48377924 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 11

Conread position: 7-134
Cow position: chr10:47976718-47976590 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 98

Conread position: 7-136
Cow position: chr10:24497074-24497203 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 84

Conread position: 8-101
Cow position: chr10:65803257-65803352 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 8-102
Cow position: chr10:31266501-31266594 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 9-98
Cow position: chr10:58066310-58066397 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 9-134
Cow position: chr10:5543423-5543548 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 95

Conread position: 11-93
Cow position: chr10:60237291-60237373 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 79
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-117
Cow position: chr10:29974306-29974411 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 13-99
Cow position: chr10:11059618-11059533 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 13-100
Cow position: chr10:37818738-37818824 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr10:23376641-23376729 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-107
Cow position: chr10:39123879-39123972 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 13-131
Cow position: chr10:34607380-34607261 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 13-138
Cow position: chr10:6505183-6505058 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 117

Conread position: 16-120
Cow position: chr10:35026145-35026042 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 17-99
Cow position: chr10:32834448-32834366 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 77
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-103
Cow position: chr10:1488666-1488581 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 17-107
Cow position: chr10:20294848-20294938 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-102
Cow position: chr10:22520350-22520432 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 1-92
Cow position: chr11:5416740-5416649 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 64

Conread position: 1-92
Cow position: chr11:41315475-41315566 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr11:3726126-3726033 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-94
Cow position: chr11:2050419-2050326 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr11:48659532-48659438 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-95
Cow position: chr11:75748274-75748180 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr11:377805-377904 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-96
Cow position: chr11:1071252-1071347 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr11:50152975-50153074 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-97
Cow position: chr11:71309687-71309785 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-98
Cow position: chr11:8105622-8105525 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr11:15896853-15896946 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-98
Cow position: chr11:23128701-23128797 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-98
Cow position: chr11:29947087-29947184 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr11:34616108-34616011 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr11:45872479-45872576 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr11:77207888-77207791 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:866143-866040 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:1362637-1362739 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:1485517-1485619 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:8988387-8988488 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:9234468-9234369 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr11:11125503-11125404 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr11:17860314-17860412 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:19787981-19787887 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr11:27907392-27907294 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:31227830-31227736 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr11:32378027-32377929 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:34829939-34830038 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-99
Cow position: chr11:35363338-35363237 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr11:36986805-36986703 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr11:37068464-37068561 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 1-99
Cow position: chr11:39034290-39034196 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-99
Cow position: chr11:41986204-41986302 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:47125405-47125307 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:50197601-50197703 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr11:53130651-53130554 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr11:53147705-53147798 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr11:53778455-53778354 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 6

Conread position: 1-99
Cow position: chr11:54334175-54334076 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position: chr11:55333752-55333650 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:56728790-56728688 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr11:58990350-58990252 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:60302118-60302216 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:63065497-63065395 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:63166319-63166418 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr11:63482586-63482684 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:65430901-65430806 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 1-99
Cow position: chr11:68570833-68570930 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 1-99
Cow position: chr11:73924719-73924817 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr11:74929623-74929522 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 94

Conread position: 1-99
Cow position: chr11:79728829-79728932 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr11:80788072-80788169 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr11:81174730-81174632 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 92
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 91

Conread position: 1-99
Cow position: chr11:84890909-84891010 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 94

Conread position: 1-99
Cow position: chr11:85723540-85723443 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 1-100
Cow position: chr11:35881751-35881652 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr11:8339565-8339665 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr11:27462546-27462645 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 1-102
Cow position: chr11:36647204-36647099 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-102
Cow position: chr11:70205884-70205786 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1-102
Cow position: chr11:70303921-70303821 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1-103
Cow position: chr11:46746474-46746372 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-105
Cow position: chr11:171857-171961 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-105
Cow position: chr11:40818799-40818903 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-109
Cow position: chr11:44642446-44642553 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 1-110
Cow position: chr11:65857697-65857588 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 98

Conread position: 1-112
Cow position: chr11:48474543-48474438 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-120
Cow position: chr11:23138221-23138339 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 91

Conread position: 1-121
Cow position: chr11:19247355-19247475 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 103

Conread position: 1-127
Cow position: chr11:4436171-4436047 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 1-127
Cow position: chr11:30192013-30191884 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 106

Conread position: 1-127
Cow position: chr11:41983607-41983732 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1-130
Cow position: chr11:83196339-83196211 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 91

Conread position: 1-131
Cow position: chr11:17968736-17968867 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 102

Conread position: 1-131
Cow position: chr11:18086499-18086629 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 31

Conread position: 1-131
Cow position: chr11:48272038-48271904 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 1-131
Cow position: chr11:55117316-55117181 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr11:7315287-7315419 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr11:15285774-15285910 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 106

Conread position: 1-134
Cow position: chr11:17278825-17278953 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-134
Cow position: chr11:27939326-27939194 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 1-134
Cow position: chr11:33414077-33413941 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position: chr11:35238672-35238536 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position: chr11:37118328-37118192 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 67

Conread position: 1-134
Cow position: chr11:61454691-61454827 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position: chr11:71846505-71846641 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-137
Cow position: chr11:75510390-75510525 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 83

Conread position: 2-98
Cow position: chr11:36182527-36182431 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr11:34962900-34962804 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr11:35276143-35276042 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 2-99
Cow position: chr11:69119142-69119041 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position: chr11:76114494-76114396 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 2-101
Cow position: chr11:10992120-10992019 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 2-102
Cow position: chr11:17321500-17321396 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 2-103
Cow position: chr11:48697286-48697185 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-109
Cow position: chr11:69075146-69075037 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 2-123
Cow position: chr11:39057475-39057354 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 99, 15

Conread position: 2-134
Cow position: chr11:1486028-1486161 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 103

Conread position: 3-98
Cow position: chr11:40458958-40458863 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr11:33341307-33341404 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 56

Conread position: 3-99
Cow position: chr11:44575897-44575995 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 3-99
Cow position: chr11:52381033-52381129 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr11:68910010-68910106 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr11:83925081-83924982 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 3-107
Cow position: chr11:85764785-85764685 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 4-95
Cow position: chr11:40792857-40792948 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chr11:45631924-45632023 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 4-99
Cow position: chr11:48932747-48932841 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 87
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 4-134
Cow position: chr11:40467283-40467416 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 103

Conread position: 5-99
Cow position: chr11:3797245-3797151 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr11:51144552-51144460 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr11:30708337-30708245 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 86
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 6-102
Cow position: chr11:30934259-30934164 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 6-107
Cow position: chr11:2281455-2281553 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 6-136
Cow position: chr11:49105892-49105766 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 6-137
Cow position: chr11:56654381-56654254 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 7-97
Cow position: chr11:7924756-7924845 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 7-97
Cow position: chr11:48901244-48901334 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr11:6633224-6633130 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 7-102
Cow position: chr11:30354900-30354806 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 7-131
Cow position: chr11:23232676-23232804 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 7-134
Cow position: chr11:7683663-7683539 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 8-99
Cow position: chr11:59702317-59702226 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 84

Conread position: 8-102
Cow position: chr11:81300780-81300874 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-97
Cow position: chr11:16342410-16342497 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 80
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 9-99
Cow position: chr11:6234047-6234137 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position: chr11:40608890-40608979 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 9-99
Cow position: chr11:67600599-67600509 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr11:35580084-35579968 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 10-102
Cow position: chr11:38193982-38193890 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-113
Cow position: chr11:59959149-59959252 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 81

Conread position: 11-99
Cow position: chr11:30764309-30764221 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-95
Cow position: chr11:58588172-58588090 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 75
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position: chr11:16251421-16251504 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 77
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr11:17831400-17831485 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr11:4323194-4323108 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr11:70273128-70273043 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-134
Cow position: chr11:3303664-3303544 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 14-101
Cow position: chr11:39115320-39115233 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 14-112
Cow position: chr11:83357217-83357122 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 14-116
Cow position: chr11:59673010-59673111 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 15-99
Cow position: chr11:49148874-49148791 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 77
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 17-99
Cow position: chr11:38577993-38578075 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-99
Cow position: chr11:21549317-21549237 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 73
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-134
Cow position: chr11:39499198-39499084 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 1-88
Cow position: chr12:31228394-31228307 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr12:48415693-48415780 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr12:39486253-39486156 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-95
Cow position: chr12:18572461-18572367 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr12:3055961-3055862 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-96
Cow position: chr12:44517916-44518010 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-97
Cow position: chr12:12017698-12017600 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position: chr12:16359694-16359598 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr12:17031435-17031345 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-97
Cow position: chr12:30662129-30662226 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-97
Cow position: chr12:31959718-31959617 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-98
Cow position: chr12:5714448-5714352 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr12:7109008-7108911 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 92
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr12:9413949-9414045 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-98
Cow position: chr12:19866062-19865965 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 85

Conread position: 1-98
Cow position: chr12:25561192-25561093 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-98
Cow position: chr12:28572526-28572425 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr12:30170491-30170390 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr12:2242065-2242163 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:3076799-3076901 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr12:3600076-3600174 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:5905877-5905779 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:6210337-6210435 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:14131920-14132022 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr12:17008021-17007919 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr12:17486317-17486415 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:17495372-17495470 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:18123506-18123409 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr12:18388462-18388560 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:18421103-18421204 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 94

Conread position: 1-99
Cow position: chr12:18937211-18937109 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr12:22285281-22285378 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr12:24755205-24755302 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-99
Cow position: chr12:25320747-25320645 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 1-99
Cow position: chr12:25455938-25455836 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr12:28011079-28011177 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:29119719-29119621 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:34385694-34385792 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 14

Conread position: 1-99
Cow position: chr12:36954555-36954653 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr12:42966820-42966723 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr12:37123332-37123233 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 92
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 1-102
Cow position: chr12:17716900-17716802 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-107
Cow position: chr12:2711312-2711206 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr12:6241133-6241011 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 106

Conread position: 1-127
Cow position: chr12:18577669-18577545 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-131
Cow position: chr12:31925470-31925343 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position: chr12:36118794-36118660 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 1-134
Cow position: chr12:30605332-30605468 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 106

Conread position: 2-92
Cow position: chr12:8710650-8710560 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-93
Cow position: chr12:4866633-4866542 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-95
Cow position: chr12:47929034-47928941 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr12:23154645-23154744 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 92

Conread position: 2-99
Cow position: chr12:32391664-32391567 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-103
Cow position: chr12:11109588-11109487 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr12:25805292-25805387 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr12:46143639-46143543 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr12:22124830-22124732 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 3-102
Cow position: chr12:22132160-22132258 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 3-134
Cow position: chr12:45065653-45065522 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 101

Conread position: 4-99
Cow position: chr12:26777337-26777430 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 4-112
Cow position: chr12:25529851-25529740 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 103

Conread position: 5-95
Cow position: chr12:20283726-20283636 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 84
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr12:9914605-9914511 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 21

Conread position: 6-114
Cow position: chr12:40110203-40110098 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 6-124
Cow position: chr12:1284643-1284760 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 97

Conread position: 9-93
Cow position: chr12:40158428-40158512 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-98
Cow position: chr12:6410916-6411005 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position: chr12:4341908-4341998 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr12:3160875-3160753 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 82

Conread position: 10-103
Cow position: chr12:21922246-21922153 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr12:12178729-12178643 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr12:38775057-38774969 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr12:30590584-30590496 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-134
Cow position: chr12:26782689-26782569 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 14-141
Cow position: chr12:30728432-30728559 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 16-98
Cow position: chr12:20316702-20316783 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 77
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 1-94
Cow position: chr13:9884891-9884988 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr13:20041835-20041740 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-95
Cow position: chr13:21988979-21988885 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr13:34728710-34728616 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr13:2339557-2339652 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-97
Cow position: chr13:19555879-19555975 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr13:21235560-21235462 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr13:22732251-22732154 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr13:25531661-25531564 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 90
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr13:40652060-40652157 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr13:54237473-54237570 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:1011455-1011557 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr13:1042834-1042731 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr13:2463100-2463006 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr13:3315551-3315448 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr13:4038007-4038105 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:6079292-6079194 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:12989971-12990072 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr13:15869248-15869344 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr13:16292672-16292771 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr13:17613473-17613571 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:20605992-20605894 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:20820714-20820616 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 91

Conread position: 1-99
Cow position: chr13:20879704-20879610 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr13:21241966-21241867 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr13:25261685-25261582 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr13:25926919-25927017 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:27525138-27525037 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr13:30651302-30651400 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 42

Conread position: 1-99
Cow position: chr13:32017399-32017298 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 93

Conread position: 1-99
Cow position: chr13:33517797-33517699 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:36264091-36264189 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr13:37985627-37985526 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 94

Conread position: 1-99
Cow position: chr13:51528318-51528221 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 18

Conread position: 1-99
Cow position: chr13:51901740-51901837 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 1-99
Cow position: chr13:54093871-54093965 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr13:55947753-55947657 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position: chr13:58043756-58043853 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr13:60508992-60508891 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-100
Cow position: chr13:20531014-20530917 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 78

Conread position: 1-100
Cow position: chr13:25453293-25453396 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr13:57494056-57493957 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr13:61166331-61166230 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 47

Conread position: 1-102
Cow position: chr13:14927362-14927467 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 94
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr13:20378211-20378109 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-102
Cow position: chr13:34035489-34035596 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-102
Cow position: chr13:54286637-54286536 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-104
Cow position: chr13:17800199-17800302 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-105
Cow position: chr13:1779960-1780064 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-108
Cow position: chr13:12207170-12207276 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-110
Cow position: chr13:29671312-29671205 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1-110
Cow position: chr13:31808639-31808748 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 102

Conread position: 1-110
Cow position: chr13:37069476-37069584 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position: chr13:35659877-35659990 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 105

Conread position: 1-112
Cow position: chr13:61170592-61170479 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 94

Conread position: 1-120
Cow position: chr13:21275982-21276100 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 1-131
Cow position: chr13:20271087-20270960 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-133
Cow position: chr13:60599816-60599685 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 103

Conread position: 1-134
Cow position: chr13:21287963-21287831 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr13:24754008-24754143 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 105

Conread position: 1-134
Cow position: chr13:32949880-32949744 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position: chr13:33256623-33256755 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 1-134
Cow position: chr13:33875791-33875921 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-134
Cow position: chr13:34508000-34508135 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 105

Conread position: 1-134
Cow position: chr13:38484960-38485089 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 27

Conread position: 1-134
Cow position: chr13:40722582-40722451 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 1-134
Cow position: chr13:42114148-42114280 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr13:45353173-45353301 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 1-134
Cow position: chr13:60436756-60436624 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 2-97
Cow position: chr13:12202493-12202587 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 2-98
Cow position: chr13:9974944-9974844 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-98
Cow position: chr13:28683487-28683582 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr13:37517008-37516911 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 90
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr13:43480185-43480286 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-102
Cow position: chr13:34052473-34052374 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 91
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 2-107
Cow position: chr13:5910587-5910484 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 3-97
Cow position: chr13:6975661-6975567 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr13:19643529-19643435 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr13:21039469-21039375 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr13:18551576-18551673 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 3-99
Cow position: chr13:24376615-24376715 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr13:34261361-34261457 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr13:48037750-48037845 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 3-102
Cow position: chr13:51821763-51821664 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-109
Cow position: chr13:23270084-23269979 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 3-134
Cow position: chr13:13344085-13344213 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 3-134
Cow position: chr13:38278008-38277878 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 4-99
Cow position: chr13:8779521-8779619 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 91

Conread position: 6-99
Cow position: chr13:22115836-22115928 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position: chr13:24155673-24155765 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position: chr13:44323034-44323128 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-101
Cow position: chr13:48251860-48251765 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-102
Cow position: chr13:42229460-42229555 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 6-110
Cow position: chr13:15041340-15041236 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 97

Conread position: 6-127
Cow position: chr13:12614392-12614512 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 6-134
Cow position: chr13:18166862-18166989 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 7-95
Cow position: chr13:9107710-9107798 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 83
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr13:23166963-23166872 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 7-99
Cow position: chr13:26261661-26261569 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr13:54381801-54381710 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 7-101
Cow position: chr13:7076388-7076483 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 9-95
Cow position: chr13:54344911-54344997 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-127
Cow position: chr13:38012497-38012613 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 11-134
Cow position: chr13:17622422-17622543 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 13-97
Cow position: chr13:7059614-7059698 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr13:15172268-15172182 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr13:16155578-16155493 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr13:26697964-26697877 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 82
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 13-129
Cow position: chr13:38283845-38283726 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 13-134
Cow position: chr13:37484131-37484011 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 18-99
Cow position: chr13:9900446-9900528 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 1-95
Cow position: chr14:10858616-10858710 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr14:25695567-25695659 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-95
Cow position: chr14:32452437-32452535 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-95
Cow position: chr14:41211037-41211135 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-96
Cow position: chr14:19513192-19513097 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr14:23591448-23591541 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-96
Cow position: chr14:23712871-23712966 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr14:6234082-6233982 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position: chr14:23080338-23080240 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-98
Cow position: chr14:28795857-28795958 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-98
Cow position: chr14:35018571-35018474 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr14:37156053-37156150 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr14:7270832-7270733 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 11

Conread position: 1-99
Cow position: chr14:11981838-11981936 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr14:16342259-16342158 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr14:16834519-16834613 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr14:18811938-18811836 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr14:18941119-18941021 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr14:19957726-19957628 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr14:19996503-19996601 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr14:22989216-22989317 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr14:24893941-24894043 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr14:27848382-27848483 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr14:33247249-33247155 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr14:33326208-33326112 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-99
Cow position: chr14:33538741-33538642 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 91
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 1-99
Cow position: chr14:34199660-34199559 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr14:35651021-35650923 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 73

Conread position: 1-99
Cow position: chr14:36585774-36585676 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr14:38143928-38143831 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 92
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr14:38296095-38295993 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr14:40034157-40034253 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr14:41479476-41479376 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 1-99
Cow position: chr14:46965743-46965841 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 92
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 91

Conread position: 1-100
Cow position: chr14:24786119-24786216 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-100
Cow position: chr14:35544334-35544231 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr14:3878637-3878737 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr14:14466294-14466195 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-101
Cow position: chr14:15032940-15033041 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 1-101
Cow position: chr14:19624275-19624375 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 94
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr14:27312610-27312709 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-102
Cow position: chr14:9901355-9901456 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 94
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr14:17755742-17755845 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-102
Cow position: chr14:22381370-22381269 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr14:25779275-25779380 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position: chr14:36554971-36554865 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-107
Cow position: chr14:10912788-10912682 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-109
Cow position: chr14:12856781-12856887 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-110
Cow position: chr14:39926379-39926484 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-112
Cow position: chr14:37883734-37883624 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position: chr14:41756445-41756553 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 1-117
Cow position: chr14:4649831-4649716 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position: chr14:36437303-36437168 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 1-134
Cow position: chr14:6490519-6490385 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 102

Conread position: 1-134
Cow position: chr14:7317017-7317153 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 106

Conread position: 1-134
Cow position: chr14:20600563-20600698 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 105

Conread position: 1-134
Cow position: chr14:24992002-24992129 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-134
Cow position: chr14:35381774-35381905 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr14:45068902-45068771 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-135
Cow position: chr14:7558247-7558114 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 69

Conread position: 2-99
Cow position: chr14:49021713-49021621 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 2-100
Cow position: chr14:41190690-41190596 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 2-102
Cow position: chr14:21964306-21964406 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position: chr14:8754512-8754640 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 27

Conread position: 2-131
Cow position: chr14:29300179-29300049 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 3-99
Cow position: chr14:11641386-11641292 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 3-99
Cow position: chr14:14187520-14187616 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr14:39774868-39774772 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr14:8964726-8964829 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 3-120
Cow position: chr14:43036066-43036181 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 3-135
Cow position: chr14:21357739-21357870 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 4-99
Cow position: chr14:11819936-11819841 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chr14:18309122-18309028 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 6-96
Cow position: chr14:19129697-19129791 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 6-98
Cow position: chr14:10697336-10697244 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr14:19593950-19593857 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr14:33209169-33209076 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-103
Cow position: chr14:34096405-34096308 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-107
Cow position: chr14:39778943-39779043 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 6-139
Cow position: chr14:22966939-22967075 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 88

Conread position: 7-117
Cow position: chr14:25231458-25231349 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 8-131
Cow position: chr14:25403752-25403628 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 9-98
Cow position: chr14:40284095-40284184 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-102
Cow position: chr14:18904415-18904322 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-99
Cow position: chr14:13723405-13723316 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position: chr14:16237309-16237224 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 13-99
Cow position: chr14:18485044-18484958 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr14:24581121-24581206 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr14:106378-106290 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-103
Cow position: chr14:28324835-28324925 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-125
Cow position: chr14:39770033-39769921 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 78

Conread position: 13-134
Cow position: chr14:11508046-11507926 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 110

Conread position: 14-99
Cow position: chr14:43249783-43249868 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-134
Cow position: chr14:13634508-13634388 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 87, 99

Conread position: 17-102
Cow position: chr14:21534839-21534754 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr15:47843027-47842935 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr15:5234773-5234680 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr15:18206281-18206187 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr15:6905768-6905867 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-96
Cow position: chr15:22168289-22168384 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr15:20459069-20458973 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr15:22751682-22751778 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr15:38394651-38394747 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr15:4501210-4501308 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-98
Cow position: chr15:6462271-6462174 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr15:9267832-9267736 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr15:11658338-11658237 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr15:12259561-12259657 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr15:20534219-20534121 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-98
Cow position: chr15:26896484-26896384 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 94

Conread position: 1-98
Cow position: chr15:36787535-36787636 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr15:38935930-38936026 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr15:40009419-40009322 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr15:41583141-41583238 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr15:41619956-41619858 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 1-99
Cow position: chr15:1297968-1298065 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 1-99
Cow position: chr15:7430208-7430310 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr15:9062367-9062265 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr15:10245780-10245680 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 93

Conread position: 1-99
Cow position: chr15:12316155-12316253 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr15:14870973-14871076 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr15:16583480-16583383 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr15:19403212-19403306 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-99
Cow position: chr15:21421174-21421270 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position: chr15:22532468-22532570 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr15:23703000-23703102 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr15:24128880-24128978 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr15:24797582-24797485 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 46

Conread position: 1-99
Cow position: chr15:27972984-27972886 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr15:32287526-32287429 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr15:36354742-36354845 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr15:39599667-39599769 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr15:39621570-39621667 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 5

Conread position: 1-99
Cow position: chr15:47042410-47042308 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr15:241074-241179 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr15:23768032-23767934 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1-101
Cow position: chr15:35642251-35642351 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr15:47274604-47274704 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr15:6046081-6045982 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-102
Cow position: chr15:23332650-23332550 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr15:26922750-26922648 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 92

Conread position: 1-102
Cow position: chr15:36782102-36782000 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-105
Cow position: chr15:5930809-5930911 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-113
Cow position: chr15:37381858-37381972 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 106

Conread position: 1-127
Cow position: chr15:26158386-26158256 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1-132
Cow position: chr15:12837088-12836958 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 63

Conread position: 1-133
Cow position: chr15:8665351-8665218 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 102

Conread position: 1-133
Cow position: chr15:51427592-51427460 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 102

Conread position: 1-134
Cow position: chr15:33605153-33605284 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 0

Conread position: 2-95
Cow position: chr15:50322827-50322920 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-98
Cow position: chr15:2952897-2952802 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 2-98
Cow position: chr15:20486981-20486889 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 2-98
Cow position: chr15:50302415-50302514 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 2-99
Cow position: chr15:6082410-6082313 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr15:22136914-22137012 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 2-99
Cow position: chr15:29810341-29810438 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr15:45479238-45479336 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-98
Cow position: chr15:29542229-29542325 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 89

Conread position: 3-99
Cow position: chr15:10283927-10284023 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr15:16616431-16616523 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-99
Cow position: chr15:21894014-21894111 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 3-99
Cow position: chr15:29792679-29792583 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr15:38883385-38883485 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 3-99
Cow position: chr15:41418588-41418488 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr15:49738814-49738718 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-101
Cow position: chr15:21803426-21803326 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 3-102
Cow position: chr15:10450673-10450569 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-120
Cow position: chr15:13669670-13669555 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 0

Conread position: 4-98
Cow position: chr15:27281102-27281192 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 5-99
Cow position: chr15:12063565-12063659 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-99
Cow position: chr15:33285116-33285211 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 6-98
Cow position: chr15:22939097-22939005 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr15:13846341-13846248 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr15:4535144-4535236 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr15:9177976-9177883 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 8-108
Cow position: chr15:25208527-25208426 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 8-125
Cow position: chr15:22938539-22938422 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-94
Cow position: chr15:143992-143907 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 9-94
Cow position: chr15:21832185-21832100 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-98
Cow position: chr15:23567886-23567799 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 9-99
Cow position: chr15:34104507-34104595 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 11-105
Cow position: chr15:13387324-13387419 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 90, 0

Conread position: 13-98
Cow position: chr15:33662737-33662822 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr15:31857835-31857921 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr15:32979791-32979705 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr15:39405978-39406063 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position: chr15:45323027-45323112 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 13-99
Cow position: chr15:47105280-47105365 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 80
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr15:25584846-25584758 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chr15:20472302-20472183 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 15-98
Cow position: chr15:13554586-13554669 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 19-134
Cow position: chr15:12199777-12199661 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 21-99
Cow position: chr15:10607802-10607724 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 72
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr16:56797016-56797106 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-89
Cow position: chr16:12106522-12106434 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 84
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-90
Cow position: chr16:48191143-48191233 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1-93
Cow position: chr16:5896277-5896185 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr16:14106504-14106413 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-94
Cow position: chr16:5845528-5845436 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 1-94
Cow position: chr16:20476394-20476301 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr16:4626533-4626631 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position: chr16:13791375-13791277 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr16:23472605-23472515 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-95
Cow position: chr16:33458142-33458240 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position: chr16:5293522-5293425 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 92

Conread position: 1-97
Cow position: chr16:43804355-43804259 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr16:4910673-4910770 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr16:9973640-9973741 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-98
Cow position: chr16:24148016-24147916 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-98
Cow position: chr16:29067026-29066929 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr16:32327510-32327413 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr16:45603537-45603440 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr16:48006629-48006730 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr16:56082502-56082599 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr16:8325593-8325690 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr16:8706692-8706791 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-99
Cow position: chr16:8807233-8807330 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr16:16932854-16932757 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 18

Conread position: 1-99
Cow position: chr16:24228492-24228590 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr16:24672499-24672599 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 70

Conread position: 1-99
Cow position: chr16:26501018-26500921 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-99
Cow position: chr16:30311252-30311349 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr16:33405899-33405997 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr16:33752057-33751958 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 1-99
Cow position: chr16:41037545-41037444 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr16:42092520-42092616 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr16:44973353-44973256 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-99
Cow position: chr16:47852762-47852859 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr16:52889550-52889650 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-100
Cow position: chr16:11008203-11008102 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 56

Conread position: 1-101
Cow position: chr16:4712763-4712659 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr16:11619608-11619512 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-101
Cow position: chr16:11775192-11775293 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-101
Cow position: chr16:29608380-29608276 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-101
Cow position: chr16:40562089-40561984 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position: chr16:4144922-4144823 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-102
Cow position: chr16:17142794-17142691 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 85

Conread position: 1-102
Cow position: chr16:17745693-17745591 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 97
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-102
Cow position: chr16:18354094-18354194 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr16:18679055-18678954 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr16:45813843-45813939 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-112
Cow position: chr16:2223545-2223659 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 1-114
Cow position: chr16:7152315-7152429 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-119
Cow position: chr16:52802502-52802381 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 106

Conread position: 1-120
Cow position: chr16:46452901-46453018 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-127
Cow position: chr16:23871790-23871917 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 93

Conread position: 1-133
Cow position: chr16:14754464-14754594 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-133
Cow position: chr16:47662575-47662439 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chr16:8621102-8620976 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-134
Cow position: chr16:8796369-8796503 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 100

Conread position: 1-134
Cow position: chr16:11099939-11100069 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 1-134
Cow position: chr16:30939591-30939460 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 1-134
Cow position: chr16:32132383-32132255 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-134
Cow position: chr16:39385261-39385127 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 104

Conread position: 1-134
Cow position: chr16:49126327-49126457 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1-134
Cow position: chr16:49141701-49141832 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 1-134
Cow position: chr16:51578558-51578693 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 1-169
Cow position: chr16:7619339-7619507 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 28

Conread position: 1-173
Cow position: chr16:45046486-45046315 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 98

Conread position: 1-188
Cow position: chr16:34168453-34168267 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 148

Conread position: 2-88
Cow position: chr16:16177675-16177589 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-98
Cow position: chr16:9933016-9932917 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 26

Conread position: 2-99
Cow position: chr16:47336587-47336490 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr16:47510109-47510208 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-103
Cow position: chr16:15370536-15370435 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-107
Cow position: chr16:16096593-16096492 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 2-107
Cow position: chr16:30143357-30143459 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 2-120
Cow position: chr16:51598748-51598862 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 2-134
Cow position: chr16:33198609-33198738 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 3-86
Cow position: chr16:4103302-4103384 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 3-89
Cow position: chr16:26342132-26342047 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 3-95
Cow position: chr16:29655185-29655090 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 73

Conread position: 3-95
Cow position: chr16:45535038-45534947 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-95
Cow position: chr16:51710272-51710363 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 3-98
Cow position: chr16:14568625-14568723 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 92

Conread position: 3-99
Cow position: chr16:22052298-22052206 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-99
Cow position: chr16:22868319-22868414 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr16:35188110-35188015 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 3-99
Cow position: chr16:41752717-41752813 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr16:43275878-43275782 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr16:54579023-54578927 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr16:51399890-51400021 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 4-99
Cow position: chr16:18205826-18205731 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chr16:22842194-22842293 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-99
Cow position: chr16:33777673-33777579 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 5-98
Cow position: chr16:30096276-30096369 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-97
Cow position: chr16:820104-820013 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 86
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr16:47820425-47820332 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 6-99
Cow position: chr16:14721890-14721982 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 6-99
Cow position: chr16:26373098-26373191 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr16:38905373-38905466 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-112
Cow position: chr16:18141481-18141581 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 7-99
Cow position: chr16:9729057-9728964 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 7-99
Cow position: chr16:37401173-37401082 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 7-107
Cow position: chr16:29557779-29557878 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 7-134
Cow position: chr16:24128553-24128427 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 7-134
Cow position: chr16:29380106-29379980 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 8-99
Cow position: chr16:30909080-30909171 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position: chr16:53613149-53613059 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 9-97
Cow position: chr16:18496318-18496406 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position: chr16:11790863-11790773 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-102
Cow position: chr16:11082791-11082697 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 68

Conread position: 9-135
Cow position: chr16:30715342-30715217 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 11-101
Cow position: chr16:13578995-13579085 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-93
Cow position: chr16:39695631-39695711 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 73
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-97
Cow position: chr16:5292817-5292734 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-98
Cow position: chr16:45785585-45785499 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 13-99
Cow position: chr16:15320624-15320709 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 13-99
Cow position: chr16:28191913-28191827 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr16:42970085-42970171 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr16:47620226-47620138 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr16:40333479-40333568 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-103
Cow position: chr16:26610480-26610389 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 13-134
Cow position: chr16:25170236-25170117 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-85
Cow position: chr17:20269501-20269417 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 77
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr17:908645-908558 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr17:40331664-40331577 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr17:24773583-24773494 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-94
Cow position: chr17:1026180-1026085 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position: chr17:4436332-4436426 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr17:21207232-21207330 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr17:29292468-29292562 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr17:30539352-30539442 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-96
Cow position: chr17:24824151-24824056 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 89
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr17:30718520-30718615 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr17:35311325-35311225 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 1-97
Cow position: chr17:6936765-6936859 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-97
Cow position: chr17:9117546-9117446 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-97
Cow position: chr17:15299971-15300067 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr17:15333808-15333908 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-97
Cow position: chr17:21003929-21004028 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-97
Cow position: chr17:21312906-21313001 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr17:966840-966937 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr17:7648119-7648022 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr17:13143791-13143888 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr17:21628381-21628284 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr17:23517269-23517365 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr17:29715287-29715384 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr17:34595843-34595742 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr17:1295672-1295770 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr17:3258392-3258298 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr17:3471319-3471222 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1-99
Cow position: chr17:11156590-11156692 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr17:11171698-11171597 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 91

Conread position: 1-99
Cow position: chr17:11281208-11281306 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 64

Conread position: 1-99
Cow position: chr17:11381819-11381919 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr17:12216174-12216276 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr17:12289516-12289614 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr17:14848628-14848722 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr17:15376221-15376124 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr17:18860820-18860919 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-99
Cow position: chr17:20874217-20874122 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr17:26230842-26230741 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr17:27162551-27162453 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr17:30665172-30665074 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 91

Conread position: 1-99
Cow position: chr17:32651515-32651417 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr17:40741550-40741448 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr17:15664567-15664468 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-101
Cow position: chr17:20993141-20993240 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 1-102
Cow position: chr17:5246794-5246694 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr17:20835496-20835391 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-102
Cow position: chr17:21363306-21363206 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr17:24077301-24077202 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 62

Conread position: 1-103
Cow position: chr17:22057274-22057377 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position: chr17:24787118-24787225 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-104
Cow position: chr17:4213659-4213552 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-104
Cow position: chr17:27306061-27305955 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 91

Conread position: 1-107
Cow position: chr17:5896011-5896117 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 92

Conread position: 1-109
Cow position: chr17:3182685-3182792 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 91

Conread position: 1-109
Cow position: chr17:33052758-33052654 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 27

Conread position: 1-110
Cow position: chr17:18592343-18592230 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 107

Conread position: 1-112
Cow position: chr17:11618483-11618369 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 1-112
Cow position: chr17:20090722-20090832 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position: chr17:30999677-30999565 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 5

Conread position: 1-112
Cow position: chr17:33793077-33792971 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-116
Cow position: chr17:26224420-26224304 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 94

Conread position: 1-127
Cow position: chr17:7697956-7697830 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 82

Conread position: 1-128
Cow position: chr17:7041046-7041174 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 1-132
Cow position: chr17:2275174-2275043 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr17:2729898-2730031 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr17:11386413-11386283 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-134
Cow position: chr17:21335795-21335931 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 106

Conread position: 1-134
Cow position: chr17:23063611-23063478 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 103

Conread position: 1-134
Cow position: chr17:34079201-34079331 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-137
Cow position: chr17:21017697-21017559 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 106

Conread position: 1-146
Cow position: chr17:32419215-32419364 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 106

Conread position: 1-156
Cow position: chr17:7132552-7132711 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 133

Conread position: 1-237
Cow position: chr17:9746417-9746177 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 175

Conread position: 2-88
Cow position: chr17:43717416-43717501 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 2-95
Cow position: chr17:3781943-3781850 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr17:5423171-5423270 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 62

Conread position: 2-99
Cow position: chr17:17406040-17405939 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position: chr17:21738982-21739083 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 2-101
Cow position: chr17:6624156-6624057 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-101
Cow position: chr17:11912802-11912901 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position: chr17:41029850-41029758 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr17:3498766-3498863 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 3-99
Cow position: chr17:10432302-10432394 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr17:12054616-12054521 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr17:23680881-23680785 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-100
Cow position: chr17:15684403-15684305 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-101
Cow position: chr17:21973236-21973332 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 3-105
Cow position: chr17:9911662-9911560 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 98

Conread position: 3-120
Cow position: chr17:7760565-7760682 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 101

Conread position: 4-98
Cow position: chr17:3306763-3306670 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 4-126
Cow position: chr17:11101894-11102019 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 103

Conread position: 6-99
Cow position: chr17:7890285-7890378 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-102
Cow position: chr17:12059197-12059292 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 7-94
Cow position: chr17:7850954-7851041 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr17:18884454-18884546 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 85

Conread position: 7-99
Cow position: chr17:21806909-21807004 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 7-118
Cow position: chr17:1275411-1275302 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 12

Conread position: 8-98
Cow position: chr17:32279015-32279105 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position: chr17:11832247-11832335 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 8-99
Cow position: chr17:26818561-26818651 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 9-134
Cow position: chr17:38832933-38832809 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 10-99
Cow position: chr17:21874427-21874515 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 13-98
Cow position: chr17:1256617-1256702 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr17:16117541-16117628 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position: chr17:27679357-27679443 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr17:32977088-32977173 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-100
Cow position: chr17:21412360-21412447 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-100
Cow position: chr17:21434842-21434929 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr17:21243900-21243987 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 14-102
Cow position: chr17:3153886-3153974 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr18:50082419-50082513 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr18:18957965-18958060 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr18:14815507-14815605 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 1-97
Cow position: chr18:23447256-23447352 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr18:3180246-3180149 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr18:4490044-4490145 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr18:9974498-9974596 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 91

Conread position: 1-98
Cow position: chr18:22121055-22121153 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chr18:33606454-33606361 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr18:48407619-48407518 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr18:2270674-2270775 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr18:3115285-3115188 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr18:5711842-5711940 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 13

Conread position: 1-99
Cow position: chr18:7076594-7076491 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr18:11166805-11166707 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr18:13359890-13359790 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 65

Conread position: 1-99
Cow position: chr18:15025504-15025407 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr18:15172858-15172761 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-99
Cow position: chr18:18976914-18976812 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-99
Cow position: chr18:19193526-19193621 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-99
Cow position: chr18:20174304-20174402 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr18:21195512-21195611 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 1-99
Cow position: chr18:22790245-22790346 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr18:25647426-25647521 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr18:35076211-35076115 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr18:38985517-38985415 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr18:40759041-40758944 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr18:48290612-48290710 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr18:49161626-49161728 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr18:51212012-51211910 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 95

Conread position: 1-99
Cow position: chr18:56163413-56163315 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr18:14048540-14048439 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 45

Conread position: 1-102
Cow position: chr18:2569631-2569525 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr18:30794260-30794159 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr18:46048587-46048486 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr18:36098027-36097924 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 1-106
Cow position: chr18:24342449-24342345 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 18

Conread position: 1-118
Cow position: chr18:50974752-50974868 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 5

Conread position: 1-120
Cow position: chr18:55589653-55589767 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-131
Cow position: chr18:9007974-9007844 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 63

Conread position: 1-131
Cow position: chr18:16417867-16418001 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position: chr18:35636520-35636656 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 106

Conread position: 1-134
Cow position: chr18:36445264-36445126 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 108

Conread position: 1-137
Cow position: chr18:1144364-1144505 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 79

Conread position: 2-88
Cow position: chr18:43283933-43284019 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr18:15881032-15881129 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr18:56191379-56191476 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr18:12058840-12058747 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 3-98
Cow position: chr18:34527278-34527373 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr18:50382082-50381986 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 3-99
Cow position: chr18:10656269-10656174 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr18:19831121-19831025 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr18:33157645-33157549 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr18:19433535-19433630 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 4-99
Cow position: chr18:2592354-2592445 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 4-99
Cow position: chr18:45395828-45395729 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 5-99
Cow position: chr18:25282731-25282827 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 6-92
Cow position: chr18:24022201-24022115 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr18:36458755-36458662 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr18:45880189-45880282 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr18:49655535-49655443 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 6-125
Cow position: chr18:49543299-49543181 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 6-131
Cow position: chr18:4556563-4556690 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 6-134
Cow position: chr18:39709712-39709584 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 98

Conread position: 7-99
Cow position: chr18:20127283-20127374 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 7-99
Cow position: chr18:24048068-24047976 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-127
Cow position: chr18:21752123-21752006 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 8-103
Cow position: chr18:21768446-21768352 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 9-99
Cow position: chr18:51691650-51691740 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-119
Cow position: chr18:48453507-48453401 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chr18:47314480-47314604 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-84
Cow position: chr19:24956595-24956678 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-84
Cow position: chr19:29625753-29625668 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-88
Cow position: chr19:6531738-6531651 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr19:20622505-20622418 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr19:21335765-21335856 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-88
Cow position: chr19:27104593-27104506 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr19:41817748-41817841 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 23

Conread position: 1-95
Cow position: chr19:41584822-41584728 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr19:55247473-55247379 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr19:5433715-5433810 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-97
Cow position: chr19:6688154-6688254 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position: chr19:11817083-11817178 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 89
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr19:7473545-7473449 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-98
Cow position: chr19:21042967-21042867 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr19:22765468-22765367 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr19:32450929-32450828 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr19:38637953-38638051 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 1-98
Cow position: chr19:42694837-42694738 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr19:43178428-43178527 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-99
Cow position: chr19:2138258-2138356 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr19:2207925-2208026 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr19:2577424-2577325 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 62

Conread position: 1-99
Cow position: chr19:9294116-9294019 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-99
Cow position: chr19:10080916-10080818 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr19:20310783-20310881 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr19:20671050-20671152 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr19:21115154-21115056 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr19:23786040-23785937 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr19:27612321-27612418 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr19:28451253-28451154 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr19:32457491-32457391 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 92
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr19:33468871-33468773 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr19:33932296-33932392 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position: chr19:36845094-36844998 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr19:43431475-43431572 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-99
Cow position: chr19:46454701-46454600 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 75

Conread position: 1-99
Cow position: chr19:46822285-46822188 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr19:46918693-46918590 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr19:52214935-52214837 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr19:52381377-52381281 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 1-99
Cow position: chr19:53372049-53372147 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr19:419721-419624 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-101
Cow position: chr19:10171848-10171747 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-101
Cow position: chr19:33882313-33882410 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1-102
Cow position: chr19:23832722-23832822 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-102
Cow position: chr19:39751332-39751227 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-103
Cow position: chr19:1968457-1968560 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position: chr19:9583162-9583059 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position: chr19:25727031-25727133 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 63

Conread position: 1-103
Cow position: chr19:31846694-31846798 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 60

Conread position: 1-103
Cow position: chr19:36059783-36059676 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 1-111
Cow position: chr19:46159904-46159794 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 102

Conread position: 1-116
Cow position: chr19:44125493-44125381 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-122
Cow position: chr19:51185274-51185155 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 103

Conread position: 1-128
Cow position: chr19:29627532-29627653 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 22

Conread position: 1-134
Cow position: chr19:2154224-2154360 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chr19:35742009-35741872 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 107

Conread position: 1-134
Cow position: chr19:42240444-42240576 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr19:48722876-48722737 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-204
Cow position: chr19:4537570-4537764 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 196, 27

Conread position: 2-95
Cow position: chr19:14347858-14347765 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-95
Cow position: chr19:43058382-43058288 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 2-95
Cow position: chr19:46180968-46181061 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr19:20693343-20693248 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 2-99
Cow position: chr19:24144867-24144767 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 93

Conread position: 2-99
Cow position: chr19:36176595-36176495 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 93

Conread position: 2-99
Cow position: chr19:43418264-43418170 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 2-102
Cow position: chr19:11376559-11376659 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-109
Cow position: chr19:16694198-16694307 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 93

Conread position: 2-111
Cow position: chr19:13390762-13390656 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 23

Conread position: 2-134
Cow position: chr19:31595145-31595014 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 3-93
Cow position: chr19:990564-990656 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 3-99
Cow position: chr19:25041482-25041578 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr19:33306945-33306846 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 92

Conread position: 3-99
Cow position: chr19:47118650-47118749 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 92

Conread position: 3-131
Cow position: chr19:30925473-30925599 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 3-134
Cow position: chr19:23304651-23304779 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 4-101
Cow position: chr19:19173963-19173865 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 4-101
Cow position: chr19:43441011-43440910 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 5-99
Cow position: chr19:4445777-4445871 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr19:386986-386895 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 6-99
Cow position: chr19:5913108-5913201 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr19:35540148-35540053 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 7-99
Cow position: chr19:15863197-15863289 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr19:27348421-27348512 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 7-101
Cow position: chr19:33235910-33236004 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-134
Cow position: chr19:6516101-6515976 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 8-95
Cow position: chr19:47187212-47187299 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 8-134
Cow position: chr19:12036664-12036789 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 95

Conread position: 9-99
Cow position: chr19:10213509-10213420 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 9-99
Cow position: chr19:15437948-15437858 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-107
Cow position: chr19:37633513-37633610 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 11-99
Cow position: chr19:53800116-53800204 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position: chr19:8212002-8212085 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 80
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr19:1355448-1355362 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr19:33912798-33912884 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr19:39661709-39661795 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr19:20432943-20433031 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 82
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr19:39254664-39254752 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chr19:4340072-4340192 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 15-103
Cow position: chr19:25902173-25902083 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 78

Conread position: 19-99
Cow position: chr19:13755719-13755640 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 74
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 1-84
Cow position: chr2:79403959-79403876 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-87
Cow position: chr2:80275433-80275519 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr2:45784590-45784503 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr2:46189234-46189320 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-88
Cow position: chr2:47808588-47808501 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position: chr2:48361430-48361335 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-93
Cow position: chr2:34695100-34695008 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr2:44222476-44222384 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr2:48864120-48864214 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 1-95
Cow position: chr2:68660650-68660556 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr2:69770362-69770268 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr2:85246472-85246566 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr2:78750397-78750302 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr2:80177904-80177999 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr2:43835701-43835800 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-98
Cow position: chr2:13467553-13467461 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chr2:15674405-15674309 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr2:17444653-17444556 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr2:21171257-21171160 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr2:25964626-25964723 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr2:29268919-29268824 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-98
Cow position: chr2:31499857-31499763 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-98
Cow position: chr2:36318524-36318620 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 1-98
Cow position: chr2:56828710-56828806 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 18

Conread position: 1-98
Cow position: chr2:56846612-56846514 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-99
Cow position: chr2:6038867-6038765 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr2:7194061-7193963 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:8295693-8295595 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:8505680-8505578 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr2:13342117-13342219 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr2:13684568-13684467 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr2:15571668-15571767 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 1-99
Cow position: chr2:21223976-21223879 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-99
Cow position: chr2:21382994-21383096 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr2:21407779-21407681 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:24271088-24270988 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 93

Conread position: 1-99
Cow position: chr2:26318490-26318392 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:27076575-27076477 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:27145505-27145603 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:28637420-28637521 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 94

Conread position: 1-99
Cow position: chr2:28711131-28711226 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr2:29291682-29291779 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr2:29734367-29734263 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr2:30816818-30816718 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 63

Conread position: 1-99
Cow position: chr2:36630829-36630730 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr2:39564216-39564114 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr2:44007153-44007056 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr2:44065449-44065353 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr2:44170419-44170317 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr2:44550978-44551073 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-99
Cow position: chr2:45896873-45896777 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-99
Cow position: chr2:46171016-46171113 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 1-99
Cow position: chr2:46194654-46194556 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:46745782-46745683 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-99
Cow position: chr2:52344618-52344523 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-99
Cow position: chr2:53574962-53574868 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr2:54654758-54654858 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr2:55632638-55632536 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr2:58310554-58310455 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr2:66404070-66404167 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr2:68109884-68109982 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:69250818-69250915 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr2:69579824-69579920 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 1-99
Cow position: chr2:74249366-74249466 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 1-99
Cow position: chr2:76340800-76340898 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr2:80797535-80797436 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-100
Cow position: chr2:25928314-25928213 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 5

Conread position: 1-100
Cow position: chr2:84480657-84480760 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr2:1210909-1211009 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr2:43123179-43123078 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 92
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 1-101
Cow position: chr2:77241713-77241614 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 27

Conread position: 1-102
Cow position: chr2:9687721-9687818 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-102
Cow position: chr2:14884143-14884043 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr2:16387544-16387443 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr2:43994797-43994692 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr2:45281180-45281081 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-102
Cow position: chr2:49608446-49608345 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr2:53430585-53430485 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 93
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr2:56102607-56102712 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 95
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position: chr2:70746656-70746555 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 53

Conread position: 1-102
Cow position: chr2:80963788-80963886 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 92
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 1-103
Cow position: chr2:24669019-24668912 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 1-103
Cow position: chr2:46202130-46202024 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-106
Cow position: chr2:80904068-80904170 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-107
Cow position: chr2:20940299-20940192 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-107
Cow position: chr2:74763399-74763505 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-108
Cow position: chr2:24469798-24469905 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-110
Cow position: chr2:17967170-17967283 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 107

Conread position: 1-110
Cow position: chr2:73466655-73466763 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position: chr2:14624722-14624616 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-112
Cow position: chr2:43624668-43624778 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position: chr2:46227325-46227216 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-112
Cow position: chr2:82262520-82262632 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1-120
Cow position: chr2:39385007-39385122 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-124
Cow position: chr2:70539516-70539639 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 103

Conread position: 1-127
Cow position: chr2:17114873-17115003 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-131
Cow position: chr2:24709481-24709615 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 94

Conread position: 1-133
Cow position: chr2:59592883-59593017 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 106

Conread position: 1-134
Cow position: chr2:305989-306119 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr2:37009275-37009145 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr2:57939545-57939409 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 106

Conread position: 1-134
Cow position: chr2:68084374-68084241 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 103

Conread position: 1-137
Cow position: chr2:52485118-52485255 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 94

Conread position: 1-144
Cow position: chr2:46244163-46244308 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 112

Conread position: 2-93
Cow position: chr2:46153352-46153441 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-98
Cow position: chr2:29716975-29717075 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position: chr2:59397198-59397298 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 92
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 2-99
Cow position: chr2:62978807-62978904 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr2:65604070-65604166 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr2:69676677-69676774 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr2:81388550-81388451 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 2-101
Cow position: chr2:55480380-55480479 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-102
Cow position: chr2:7524279-7524382 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 93

Conread position: 2-103
Cow position: chr2:41248425-41248324 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 62

Conread position: 2-127
Cow position: chr2:50352726-50352598 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 105

Conread position: 2-133
Cow position: chr2:34535299-34535430 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 90

Conread position: 2-134
Cow position: chr2:9063132-9062997 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 103

Conread position: 3-92
Cow position: chr2:55278743-55278832 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position: chr2:15329260-15329167 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 3-97
Cow position: chr2:39500886-39500795 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr2:13354532-13354436 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr2:21355993-21356092 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 92

Conread position: 3-99
Cow position: chr2:26102637-26102541 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr2:27173228-27173128 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr2:43978039-43978140 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr2:62685493-62685397 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-101
Cow position: chr2:55387405-55387308 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 3-102
Cow position: chr2:38273400-38273301 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr2:76561969-76561870 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr2:76621058-76620960 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 3-104
Cow position: chr2:34643292-34643189 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 3-117
Cow position: chr2:11616955-11616843 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 3-134
Cow position: chr2:47098075-47098208 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 102

Conread position: 3-134
Cow position: chr2:70895887-70895756 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 101

Conread position: 4-109
Cow position: chr2:35092833-35092936 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 4-123
Cow position: chr2:45366838-45366718 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 5-97
Cow position: chr2:15250036-15249946 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 5-101
Cow position: chr2:30642815-30642911 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-97
Cow position: chr2:51824781-51824691 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position: chr2:28118355-28118262 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr2:32048338-32048249 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 6-99
Cow position: chr2:68190784-68190875 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 6-99
Cow position: chr2:80115958-80115866 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-101
Cow position: chr2:41710733-41710640 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-101
Cow position: chr2:56771697-56771602 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-102
Cow position: chr2:19212190-19212285 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 89
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 7-98
Cow position: chr2:46058256-46058347 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-98
Cow position: chr2:46294184-46294275 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-101
Cow position: chr2:82581078-82581172 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-136
Cow position: chr2:15815447-15815313 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 100

Conread position: 9-94
Cow position: chr2:40881936-40881851 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-98
Cow position: chr2:39489635-39489546 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-101
Cow position: chr2:39584301-39584210 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 9-101
Cow position: chr2:42938450-42938541 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 11-99
Cow position: chr2:46379237-46379326 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 11-99
Cow position: chr2:76110244-76110156 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-94
Cow position: chr2:1134547-1134628 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 74
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr2:5297586-5297501 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr2:14710259-14710344 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 79
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr2:42394275-42394191 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 13-98
Cow position: chr2:65269851-65269936 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 79
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr2:25282954-25282868 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr2:42927604-42927690 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr2:45575149-45575235 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 81
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr2:23493380-23493293 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr2:81927702-81927613 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr2:84997162-84997074 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr2:57776195-57776107 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 13-102
Cow position: chr2:69581665-69581754 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-109
Cow position: chr2:37072660-37072564 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 91

Conread position: 13-120
Cow position: chr2:33497357-33497463 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 13-123
Cow position: chr2:73353637-73353525 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 92

Conread position: 13-130
Cow position: chr2:40691334-40691219 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 13-133
Cow position: chr2:50580215-50580098 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 14-102
Cow position: chr2:15059222-15059310 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 82
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 15-98
Cow position: chr2:28681060-28681143 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 77
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr20:17904061-17903974 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position: chr20:17251610-17251518 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 47

Conread position: 1-93
Cow position: chr20:40127436-40127527 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 1-94
Cow position: chr20:26680025-26679931 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 80

Conread position: 1-95
Cow position: chr20:12839958-12839862 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-96
Cow position: chr20:9537035-9536941 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-96
Cow position: chr20:14759759-14759858 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-96
Cow position: chr20:19313160-19313259 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-96
Cow position: chr20:19410463-19410562 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 94

Conread position: 1-97
Cow position: chr20:23850185-23850089 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr20:27339966-27339872 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-97
Cow position: chr20:28067525-28067620 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-97
Cow position: chr20:38768555-38768648 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-98
Cow position: chr20:4781467-4781365 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr20:12784098-12784001 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr20:14572455-14572552 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr20:22445734-22445830 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr20:23064928-23065028 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 1-98
Cow position: chr20:33435262-33435365 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr20:35958546-35958449 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:382226-382324 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:4892995-4893094 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-99
Cow position: chr20:6848522-6848425 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-99
Cow position: chr20:8556369-8556471 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr20:12155201-12155296 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 1-99
Cow position: chr20:12420717-12420818 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr20:13023577-13023675 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:13267528-13267630 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr20:13752141-13752044 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr20:14735577-14735480 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr20:14740193-14740294 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr20:16715301-16715203 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:18618537-18618442 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr20:20201887-20201795 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr20:22235216-22235117 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr20:24521652-24521554 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:29844956-29844858 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:30817436-30817340 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr20:32847257-32847155 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr20:33144654-33144752 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:33177087-33176985 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr20:34001495-34001593 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr20:34251782-34251875 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr20:39019596-39019499 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr20:40511857-40511954 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr20:15822217-15822118 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-101
Cow position: chr20:16291375-16291272 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr20:40423189-40423289 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr20:15593197-15593096 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr20:27314585-27314482 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 74

Conread position: 1-105
Cow position: chr20:5025401-5025504 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-107
Cow position: chr20:14620371-14620477 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 91

Conread position: 1-107
Cow position: chr20:22313257-22313364 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 96, 52

Conread position: 1-112
Cow position: chr20:34777085-34776977 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-118
Cow position: chr20:9379310-9379194 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-129
Cow position: chr20:3599489-3599616 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position: chr20:12996107-12996239 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1-131
Cow position: chr20:13967359-13967488 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 18

Conread position: 1-134
Cow position: chr20:9014443-9014579 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position: chr20:18399661-18399530 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr20:20203117-20202985 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr20:32636666-32636796 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr20:33169974-33170105 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1-137
Cow position: chr20:41174398-41174263 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 103

Conread position: 1-171
Cow position: chr20:5826842-5826676 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 2-95
Cow position: chr20:6602940-6602848 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position: chr20:4621440-4621536 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 2-99
Cow position: chr20:7756729-7756826 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr20:33363418-33363323 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 2-101
Cow position: chr20:22029838-22029739 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-112
Cow position: chr20:22959442-22959550 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-87
Cow position: chr20:7550140-7550056 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 77
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-96
Cow position: chr20:23679247-23679340 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr20:35907148-35907243 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 3-102
Cow position: chr20:7659316-7659413 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 4-88
Cow position: chr20:38578859-38578943 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-98
Cow position: chr20:26469167-26469261 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-98
Cow position: chr20:39376081-39375987 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-98
Cow position: chr20:39377247-39377341 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-101
Cow position: chr20:15582138-15582235 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr20:1139877-1139970 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr20:20739393-20739486 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-102
Cow position: chr20:20899130-20899036 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 6-111
Cow position: chr20:4945350-4945455 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 26

Conread position: 7-99
Cow position: chr20:39728343-39728252 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 7-103
Cow position: chr20:35009846-35009942 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-127
Cow position: chr20:14806781-14806662 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 8-104
Cow position: chr20:21345299-21345204 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 9-99
Cow position: chr20:4205854-4205766 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 13-97
Cow position: chr20:23846783-23846867 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 76
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr20:16941434-16941519 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr20:23505717-23505632 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-88
Cow position: chr21:12801825-12801912 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr21:18065002-18065089 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr21:10001001-10000914 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 82
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1-95
Cow position: chr21:31691404-31691306 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position: chr21:37361550-37361640 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-96
Cow position: chr21:5153539-5153444 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 89
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr21:31159182-31159083 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr21:33791447-33791543 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-98
Cow position: chr21:38121028-38120932 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-99
Cow position: chr21:13128172-13128267 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 1-99
Cow position: chr21:15445154-15445255 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 5

Conread position: 1-99
Cow position: chr21:17282625-17282527 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:23586802-23586700 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr21:24607311-24607209 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr21:28027726-28027627 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr21:28733990-28734088 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:29484906-29484808 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 91

Conread position: 1-99
Cow position: chr21:30231776-30231879 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr21:32237219-32237121 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:33350668-33350566 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-99
Cow position: chr21:34391053-34391146 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr21:34658956-34658858 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:34835504-34835599 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 1-99
Cow position: chr21:35897705-35897802 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 1-99
Cow position: chr21:38918136-38918039 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr21:41155785-41155685 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 82

Conread position: 1-99
Cow position: chr21:42414179-42414278 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 92

Conread position: 1-99
Cow position: chr21:42465755-42465653 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr21:42913822-42913922 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr21:46132056-46132154 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:47802338-47802436 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr21:49700114-49700212 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-100
Cow position: chr21:5137568-5137667 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr21:912045-912145 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr21:17193838-17193938 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr21:18713205-18713106 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-101
Cow position: chr21:24131002-24130903 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1-102
Cow position: chr21:643255-643154 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr21:35897404-35897303 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr21:8985471-8985368 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 95
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position: chr21:30592382-30592483 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-109
Cow position: chr21:15911321-15911213 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 24

Conread position: 1-120
Cow position: chr21:41974453-41974575 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 106

Conread position: 1-127
Cow position: chr21:33562935-33562809 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 62

Conread position: 1-129
Cow position: chr21:802373-802501 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 31

Conread position: 1-131
Cow position: chr21:28512454-28512325 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-132
Cow position: chr21:33210124-33209990 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 106

Conread position: 1-133
Cow position: chr21:42053343-42053477 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 130

Conread position: 1-134
Cow position: chr21:1483415-1483279 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position: chr21:2679478-2679342 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 106

Conread position: 1-134
Cow position: chr21:12617059-12616929 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr21:26241747-26241614 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 91

Conread position: 1-134
Cow position: chr21:33729355-33729223 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-134
Cow position: chr21:34738521-34738388 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 109

Conread position: 1-134
Cow position: chr21:36163041-36163173 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr21:38692109-38691980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 18

Conread position: 1-150
Cow position: chr21:46849201-46849342 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 2-90
Cow position: chr21:10114408-10114496 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-93
Cow position: chr21:36642828-36642737 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-94
Cow position: chr21:29069408-29069500 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr21:33642-33545 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr21:20548990-20549085 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 2-99
Cow position: chr21:31676417-31676322 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 2-99
Cow position: chr21:32535897-32535800 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr21:33263770-33263672 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 42

Conread position: 2-109
Cow position: chr21:45263101-45263206 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 3-84
Cow position: chr21:4998567-4998648 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr21:28029321-28029223 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 3-98
Cow position: chr21:28190952-28190853 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 3-99
Cow position: chr21:3763813-3763914 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr21:10151716-10151619 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 90

Conread position: 3-99
Cow position: chr21:35899732-35899632 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr21:46626998-46626901 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 3-103
Cow position: chr21:8546288-8546386 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 3-121
Cow position: chr21:38449528-38449649 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 104

Conread position: 3-127
Cow position: chr21:8618194-8618071 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 3-127
Cow position: chr21:28907725-28907847 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 3-131
Cow position: chr21:20044854-20044979 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 111, 82

Conread position: 4-93
Cow position: chr21:20925588-20925677 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-97
Cow position: chr21:28882063-28881968 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 5-98
Cow position: chr21:44671675-44671578 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 5-99
Cow position: chr21:9710785-9710880 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 6-98
Cow position: chr21:36909744-36909651 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 6-99
Cow position: chr21:3585443-3585533 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 6-101
Cow position: chr21:30607171-30607266 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-107
Cow position: chr21:42024041-42023941 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 7-113
Cow position: chr21:4268789-4268683 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-120
Cow position: chr21:30990354-30990464 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 7-127
Cow position: chr21:44251909-44252029 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 98

Conread position: 7-142
Cow position: chr21:40589567-40589701 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 115

Conread position: 8-99
Cow position: chr21:724977-725068 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-127
Cow position: chr21:39069252-39069370 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 9-110
Cow position: chr21:27863606-27863705 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 9-127
Cow position: chr21:9278286-9278169 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 9-131
Cow position: chr21:5566903-5566782 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 5

Conread position: 13-98
Cow position: chr21:7716881-7716966 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr21:4279542-4279456 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr21:19363554-19363640 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr21:22464968-22464882 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr21:24858221-24858135 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr21:31278689-31278603 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-99
Cow position: chr21:37345196-37345278 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 71

Conread position: 1-91
Cow position: chr22:10585846-10585936 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-91
Cow position: chr22:10685233-10685323 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr22:20687147-20687056 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 1-94
Cow position: chr22:1484717-1484624 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr22:15292841-15292934 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr22:16532935-16532841 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr22:25743096-25743191 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-95
Cow position: chr22:43812564-43812657 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-95
Cow position: chr22:45106063-45106157 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr22:21012245-21012150 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr22:26339611-26339520 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-97
Cow position: chr22:3325440-3325340 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-97
Cow position: chr22:15090595-15090499 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr22:40349205-40349109 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr22:4563217-4563120 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr22:31593001-31593103 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr22:47525565-47525470 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-99
Cow position: chr22:534352-534250 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr22:845757-845660 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr22:2502690-2502595 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr22:3965044-3964942 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position: chr22:4043787-4043690 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr22:6101455-6101556 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-99
Cow position: chr22:6215702-6215797 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-99
Cow position: chr22:9278754-9278660 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr22:10294903-10294807 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr22:10920005-10920107 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr22:12777727-12777826 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-99
Cow position: chr22:13720669-13720768 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-99
Cow position: chr22:19376562-19376467 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 36

Conread position: 1-99
Cow position: chr22:20626696-20626598 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr22:23865320-23865219 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr22:24066379-24066478 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 92

Conread position: 1-99
Cow position: chr22:25736579-25736678 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-99
Cow position: chr22:25943336-25943238 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 11

Conread position: 1-99
Cow position: chr22:26141131-26141030 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 1-99
Cow position: chr22:26658910-26658812 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr22:28058189-28058284 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-99
Cow position: chr22:28120650-28120548 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr22:28146539-28146441 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr22:34750531-34750434 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 1-99
Cow position: chr22:38313610-38313707 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr22:38940094-38940192 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr22:40121023-40121122 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr22:40374461-40374363 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr22:42684757-42684656 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-100
Cow position: chr22:2010653-2010555 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-100
Cow position: chr22:2141669-2141570 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr22:8329403-8329304 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr22:12946314-12946411 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 19

Conread position: 1-101
Cow position: chr22:14372022-14371922 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr22:15730716-15730614 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-103
Cow position: chr22:644907-645008 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 1-103
Cow position: chr22:1975467-1975365 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr22:10302869-10302762 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 1-103
Cow position: chr22:10609184-10609081 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 1-103
Cow position: chr22:26106913-26106810 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-103
Cow position: chr22:41982860-41982962 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr22:28370805-28370683 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 106

Conread position: 1-134
Cow position: chr22:5282361-5282231 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr22:13889770-13889639 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 18

Conread position: 1-134
Cow position: chr22:14091377-14091508 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr22:16812308-16812440 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr22:22013574-22013444 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-134
Cow position: chr22:25246764-25246633 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 2-94
Cow position: chr22:30094099-30094008 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-95
Cow position: chr22:43292043-43292140 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 2-96
Cow position: chr22:14366096-14366194 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position: chr22:5837085-5836990 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-99
Cow position: chr22:13866499-13866403 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr22:23856903-23856805 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 2-99
Cow position: chr22:36761484-36761390 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 2-129
Cow position: chr22:30954893-30954765 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 3-89
Cow position: chr22:30515105-30515019 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-92
Cow position: chr22:28289938-28289849 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr22:12968218-12968312 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 3-99
Cow position: chr22:28071407-28071311 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-102
Cow position: chr22:13688259-13688358 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-103
Cow position: chr22:852884-852782 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 3-113
Cow position: chr22:25222046-25222157 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 77

Conread position: 3-127
Cow position: chr22:12892714-12892837 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 3-133
Cow position: chr22:27431830-27431959 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 3-134
Cow position: chr22:11837347-11837478 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 101

Conread position: 3-134
Cow position: chr22:31646351-31646217 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 104

Conread position: 4-101
Cow position: chr22:7882406-7882304 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 4-112
Cow position: chr22:15490511-15490404 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 5-99
Cow position: chr22:10323759-10323663 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 5-99
Cow position: chr22:23181185-23181277 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 5-120
Cow position: chr22:13242287-13242173 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 6-92
Cow position: chr22:40048414-40048327 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 6-98
Cow position: chr22:39472526-39472618 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr22:6960717-6960625 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 6-99
Cow position: chr22:13957801-13957893 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 6-99
Cow position: chr22:34726522-34726431 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 6-100
Cow position: chr22:26749202-26749294 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 40

Conread position: 6-112
Cow position: chr22:5595941-5596044 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 7-105
Cow position: chr22:28356884-28356786 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-109
Cow position: chr22:898604-898504 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 7-109
Cow position: chr22:12998463-12998564 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 8-98
Cow position: chr22:8481495-8481405 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 83
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position: chr22:34618581-34618490 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-107
Cow position: chr22:27818850-27818753 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 9-98
Cow position: chr22:32892542-32892454 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 9-134
Cow position: chr22:11987370-11987494 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 10-99
Cow position: chr22:25341866-25341777 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 82
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position: chr22:39494360-39494443 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr22:30689474-30689389 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr22:18196352-18196267 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 13-99
Cow position: chr22:28665112-28665026 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr22:33985923-33986028 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-134
Cow position: chr22:1609913-1610033 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 19-101
Cow position: chr22:26233291-26233209 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 77
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-85
Cow position: chr23:5723403-5723319 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-91
Cow position: chr23:1923976-1924066 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr23:26632663-26632566 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-94
Cow position: chr23:35366238-35366332 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-94
Cow position: chr23:35369150-35369244 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-94
Cow position: chr23:39775590-39775498 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 1-95
Cow position: chr23:29742249-29742151 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-96
Cow position: chr23:12050225-12050130 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr23:18322556-18322655 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 94

Conread position: 1-98
Cow position: chr23:7175480-7175383 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr23:7402562-7402469 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chr23:7845153-7845052 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr23:16700182-16700276 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-98
Cow position: chr23:27563849-27563946 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr23:39302579-39302478 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr23:344314-344416 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr23:1429934-1430033 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 1-99
Cow position: chr23:1878011-1878109 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr23:1883253-1883155 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr23:4608520-4608620 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr23:8917989-8918091 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr23:9235206-9235301 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr23:9268453-9268352 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr23:14164541-14164638 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position: chr23:14895940-14896041 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr23:16583050-16583147 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-99
Cow position: chr23:18367555-18367457 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr23:22574200-22574299 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1-99
Cow position: chr23:22804584-22804484 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 11

Conread position: 1-99
Cow position: chr23:26795040-26795142 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr23:28053136-28053039 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1-99
Cow position: chr23:36199157-36199055 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr23:38208573-38208473 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 93

Conread position: 1-101
Cow position: chr23:769726-769830 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-101
Cow position: chr23:11209873-11209769 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr23:28118241-28118341 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 92

Conread position: 1-102
Cow position: chr23:534089-533989 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr23:2802427-2802527 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-102
Cow position: chr23:21343387-21343491 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr23:30662764-30662869 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-119
Cow position: chr23:3208759-3208874 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-120
Cow position: chr23:10554148-10554269 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 89

Conread position: 1-120
Cow position: chr23:28206470-28206353 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 1-123
Cow position: chr23:9599361-9599240 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-127
Cow position: chr23:27862191-27862069 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 1-127
Cow position: chr23:37065701-37065572 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 106

Conread position: 1-133
Cow position: chr23:5744961-5744827 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chr23:9594970-9595101 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 61

Conread position: 2-93
Cow position: chr23:10876287-10876197 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 2-95
Cow position: chr23:37992847-37992755 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 2-99
Cow position: chr23:33695912-33696013 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 2-102
Cow position: chr23:21336633-21336730 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 2-102
Cow position: chr23:33601669-33601765 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 2-127
Cow position: chr23:39309256-39309380 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 3-99
Cow position: chr23:11129092-11128996 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 90
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-133
Cow position: chr23:5617434-5617309 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 4-99
Cow position: chr23:15056785-15056879 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 5-98
Cow position: chr23:8006096-8006003 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr23:27544687-27544595 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr23:1991572-1991665 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr23:14739307-14739212 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 89

Conread position: 6-99
Cow position: chr23:39806728-39806635 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 86

Conread position: 6-134
Cow position: chr23:7937685-7937811 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position: chr23:13674063-13674186 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 7-95
Cow position: chr23:6367459-6367371 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-98
Cow position: chr23:40781180-40781089 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr23:26003918-26003826 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 86
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr23:40778116-40778025 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 7-108
Cow position: chr23:7596476-7596578 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 59

Conread position: 7-128
Cow position: chr23:13599195-13599075 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 84

Conread position: 9-134
Cow position: chr23:25669218-25669342 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 10-128
Cow position: chr23:2055551-2055434 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 9

Conread position: 11-99
Cow position: chr23:16073080-16072992 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-97
Cow position: chr23:11045331-11045248 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 13-98
Cow position: chr23:20057019-20057104 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr23:1610699-1610612 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 13-103
Cow position: chr23:6767738-6767649 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 15-99
Cow position: chr23:11315171-11315255 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr24:41068103-41068014 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-93
Cow position: chr24:29606233-29606325 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr24:11886995-11886897 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position: chr24:19736540-19736634 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr24:33238714-33238809 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr24:39440723-39440818 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr24:2730736-2730833 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr24:3165655-3165558 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr24:6900658-6900561 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr24:34564964-34564865 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 38

Conread position: 1-99
Cow position: chr24:19389-19485 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr24:11876719-11876619 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr24:15246801-15246900 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 1-99
Cow position: chr24:15508699-15508798 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 5

Conread position: 1-99
Cow position: chr24:20024445-20024343 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr24:27341186-27341288 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr24:28062786-28062681 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr24:30314198-30314300 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr24:33098658-33098752 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr24:33944238-33944143 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-99
Cow position: chr24:36710975-36710876 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr24:38375119-38375021 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 86

Conread position: 1-100
Cow position: chr24:20988168-20988265 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-101
Cow position: chr24:1269637-1269538 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-101
Cow position: chr24:15861767-15861867 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr24:25424901-25424797 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-102
Cow position: chr24:29389077-29388979 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 28

Conread position: 1-104
Cow position: chr24:25950832-25950936 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1-107
Cow position: chr24:11840012-11839908 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-108
Cow position: chr24:5652143-5652249 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-112
Cow position: chr24:31816423-31816309 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 106

Conread position: 1-122
Cow position: chr24:28289595-28289715 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 34

Conread position: 1-130
Cow position: chr24:15666572-15666703 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 105

Conread position: 1-133
Cow position: chr24:27874438-27874305 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 104

Conread position: 1-134
Cow position: chr24:16625667-16625799 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 115

Conread position: 1-134
Cow position: chr24:19466096-19466231 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 74

Conread position: 1-134
Cow position: chr24:27290707-27290579 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-134
Cow position: chr24:29673353-29673221 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr24:30178069-30177938 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-134
Cow position: chr24:34532961-34532825 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 94

Conread position: 1-134
Cow position: chr24:42007578-42007448 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 1-134
Cow position: chr24:44054308-44054440 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-135
Cow position: chr24:17294353-17294486 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-136
Cow position: chr24:19804525-19804387 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 106

Conread position: 1-269
Cow position: chr24:18390455-18390726 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 85

Conread position: 2-99
Cow position: chr24:29170798-29170701 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr24:33153615-33153518 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr24:40300987-40300891 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 5

Conread position: 2-134
Cow position: chr24:29781992-29781864 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 2-134
Cow position: chr24:43364192-43364066 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-97
Cow position: chr24:36554998-36555090 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 3-99
Cow position: chr24:6677333-6677238 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 43

Conread position: 3-99
Cow position: chr24:23616526-23616431 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr24:35073924-35073828 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-103
Cow position: chr24:27052663-27052761 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 3-109
Cow position: chr24:18741739-18741844 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 3-120
Cow position: chr24:28689543-28689426 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 101

Conread position: 3-134
Cow position: chr24:814433-814563 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 3-134
Cow position: chr24:5754670-5754543 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 4-99
Cow position: chr24:30545025-30545120 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-134
Cow position: chr24:32370078-32370209 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 101

Conread position: 6-98
Cow position: chr24:27844691-27844783 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 85
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr24:43200444-43200538 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 6-103
Cow position: chr24:28303520-28303617 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 82

Conread position: 9-94
Cow position: chr24:32054498-32054413 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-95
Cow position: chr24:27906256-27906174 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 76
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr24:5152055-5151971 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 13-99
Cow position: chr24:15288679-15288593 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr24:17311387-17311473 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr24:39483295-39483209 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chr24:38655270-38655390 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-88
Cow position: chr25:433224-433311 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr25:6256083-6256170 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 80
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-93
Cow position: chr25:61513-61421 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr25:25827322-25827225 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr25:16001663-16001758 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-95
Cow position: chr25:21895030-21895124 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr25:13325455-13325363 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-96
Cow position: chr25:15694838-15694745 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-97
Cow position: chr25:22203829-22203930 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-98
Cow position: chr25:10137954-10137857 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr25:15377184-15377092 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-98
Cow position: chr25:18988236-18988135 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr25:22531143-22531046 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 36

Conread position: 1-98
Cow position: chr25:24405880-24405977 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr25:26087375-26087274 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr25:26238727-26238630 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr25:1838093-1837998 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr25:7216687-7216586 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr25:7440712-7440613 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 1-99
Cow position: chr25:8961319-8961221 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr25:9842860-9842758 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 60

Conread position: 1-99
Cow position: chr25:10156445-10156349 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr25:12174645-12174747 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr25:21209088-21209190 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr25:21245751-21245848 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr25:24669575-24669672 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr25:26700893-26700798 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-99
Cow position: chr25:33664036-33664138 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr25:6003131-6003235 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr25:14791610-14791508 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-101
Cow position: chr25:24008321-24008421 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr25:1735456-1735561 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position: chr25:19679202-19679097 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-102
Cow position: chr25:36036924-36037025 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position: chr25:20348715-20348609 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 88

Conread position: 1-107
Cow position: chr25:36026864-36026758 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 104

Conread position: 1-120
Cow position: chr25:11585378-11585256 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 106

Conread position: 1-125
Cow position: chr25:25754137-25754266 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 94

Conread position: 1-130
Cow position: chr25:36871719-36871585 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-133
Cow position: chr25:9642213-9642078 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 131

Conread position: 1-134
Cow position: chr25:10365895-10366028 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 103

Conread position: 1-134
Cow position: chr25:17658469-17658339 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 1-134
Cow position: chr25:18490930-18490796 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 104

Conread position: 1-134
Cow position: chr25:20060174-20060307 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 77

Conread position: 1-134
Cow position: chr25:30319593-30319725 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 2-98
Cow position: chr25:14117964-14117868 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-98
Cow position: chr25:15254476-15254572 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr25:11436947-11437044 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr25:33256223-33256127 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 3-99
Cow position: chr25:12204324-12204228 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr25:19576585-19576682 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-107
Cow position: chr25:36761960-36761856 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr25:8347361-8347233 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 5-99
Cow position: chr25:1096430-1096335 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 6-99
Cow position: chr25:17712385-17712292 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 86
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-85
Cow position: chr25:34169804-34169726 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 73
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-107
Cow position: chr25:7581579-7581676 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 8-110
Cow position: chr25:37594263-37594162 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 9-99
Cow position: chr25:33687048-33687138 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr25:7800980-7800894 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr25:9023488-9023403 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 13-99
Cow position: chr25:10643466-10643552 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr25:16921950-16922036 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr25:17475680-17475769 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position: chr26:32652851-32652942 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr26:9082356-9082446 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-96
Cow position: chr26:13021270-13021369 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr26:16167040-16167135 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-99
Cow position: chr26:26953-27051 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr26:9867242-9867337 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr26:17057561-17057460 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr26:23097303-23097400 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 1-99
Cow position: chr26:23599918-23600015 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr26:25442013-25442113 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr26:25737346-25737248 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr26:30751989-30752087 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-100
Cow position: chr26:28243748-28243843 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-101
Cow position: chr26:15200643-15200741 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-106
Cow position: chr26:8745953-8746062 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-110
Cow position: chr26:27491626-27491736 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 89

Conread position: 1-112
Cow position: chr26:24280703-24280594 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 1-116
Cow position: chr26:28319224-28319337 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 90

Conread position: 1-119
Cow position: chr26:6794019-6793897 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-120
Cow position: chr26:6447728-6447850 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 95

Conread position: 1-120
Cow position: chr26:7525593-7525711 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-130
Cow position: chr26:23926108-23926232 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 14

Conread position: 1-134
Cow position: chr26:8352837-8352702 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position: chr26:26466846-26466975 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 2-99
Cow position: chr26:6322475-6322374 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-99
Cow position: chr26:31062074-31061977 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr26:32955750-32955847 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-88
Cow position: chr26:33567170-33567255 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr26:20182635-20182538 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 3-99
Cow position: chr26:13270801-13270901 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 3-99
Cow position: chr26:30034532-30034628 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr26:4444459-4444589 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 3-134
Cow position: chr26:4585335-4585467 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 102

Conread position: 3-134
Cow position: chr26:16585261-16585133 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-142
Cow position: chr26:32897998-32898135 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 6-95
Cow position: chr26:5988853-5988940 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 6-99
Cow position: chr26:12238174-12238266 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 7-102
Cow position: chr26:6714414-6714509 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-99
Cow position: chr26:35704252-35704162 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 82
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 11-102
Cow position: chr26:15857541-15857450 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr26:25028704-25028619 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr26:6793804-6793718 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr26:14174159-14174073 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr26:19774441-19774526 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 13-112
Cow position: chr26:22180363-22180265 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 13-134
Cow position: chr26:11134834-11134953 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-88
Cow position: chr27:13252104-13252195 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-93
Cow position: chr27:26151119-26151210 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-95
Cow position: chr27:14902554-14902456 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr27:11815661-11815564 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr27:13638894-13638797 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr27:16620086-16620186 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 94

Conread position: 1-98
Cow position: chr27:17926538-17926442 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr27:22293612-22293517 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr27:26428034-26427933 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr27:6074019-6074112 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chr27:6550550-6550647 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position: chr27:11255612-11255709 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1-99
Cow position: chr27:15454306-15454409 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position: chr27:15668665-15668571 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr27:18507728-18507828 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr27:20553815-20553913 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr27:21569745-21569647 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr27:23595371-23595469 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr27:24227695-24227597 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr27:25411419-25411323 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr27:25809422-25809327 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-99
Cow position: chr27:26398164-26398063 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 94

Conread position: 1-99
Cow position: chr27:26625223-26625322 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 92
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1-101
Cow position: chr27:23882279-23882176 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 64

Conread position: 1-102
Cow position: chr27:27040706-27040808 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 1-102
Cow position: chr27:30551095-30551195 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-113
Cow position: chr27:17472911-17473024 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1-129
Cow position: chr27:17646102-17645971 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 43

Conread position: 1-131
Cow position: chr27:23472350-23472485 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 108

Conread position: 1-131
Cow position: chr27:31372881-31372751 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 102

Conread position: 1-133
Cow position: chr27:31147576-31147444 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 31

Conread position: 1-134
Cow position: chr27:2901143-2901011 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr27:9090707-9090571 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chr27:15866322-15866451 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr27:24446060-24445926 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 104

Conread position: 2-99
Cow position: chr27:1884136-1884234 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 2-99
Cow position: chr27:15926871-15926968 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-107
Cow position: chr27:23483323-23483426 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 2-134
Cow position: chr27:14670285-14670152 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 89

Conread position: 3-90
Cow position: chr27:10992454-10992541 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 81
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-93
Cow position: chr27:20592084-20592174 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 84
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position: chr27:6523141-6523238 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 3-97
Cow position: chr27:21393404-21393310 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr27:12516295-12516395 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 3-99
Cow position: chr27:21452973-21452874 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 91

Conread position: 3-99
Cow position: chr27:24014640-24014545 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 3-99
Cow position: chr27:25380091-25380187 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr27:27141694-27141788 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 3-101
Cow position: chr27:23452576-23452678 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-104
Cow position: chr27:25783702-25783803 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 86

Conread position: 3-120
Cow position: chr27:2012002-2011887 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 3-133
Cow position: chr27:28518388-28518514 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 4-99
Cow position: chr27:25277242-25277332 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 4-100
Cow position: chr27:18922552-18922647 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 89
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 4-105
Cow position: chr27:8291911-8291809 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 4-112
Cow position: chr27:31230992-31230886 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 4-126
Cow position: chr27:29503036-29502912 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 103

Conread position: 6-111
Cow position: chr27:4673124-4673229 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr27:27640885-27640796 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-99
Cow position: chr27:30582839-30582934 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 7-103
Cow position: chr27:1058575-1058479 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-111
Cow position: chr27:19685608-19685507 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 9-101
Cow position: chr27:732678-732769 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 9-107
Cow position: chr27:2957513-2957612 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 9-137
Cow position: chr27:12429513-12429641 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 85

Conread position: 10-102
Cow position: chr27:30362351-30362442 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 12-107
Cow position: chr27:22771867-22771962 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-94
Cow position: chr27:23558275-23558194 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position: chr27:11296368-11296450 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 13-98
Cow position: chr27:24331836-24331921 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr27:6500175-6500261 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr27:18215166-18215252 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr27:22035263-22035177 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chr27:299273-299151 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 19-99
Cow position: chr27:30765148-30765228 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 73
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr28:5204063-5203976 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr28:8628913-8629001 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 82
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr28:18717258-18717347 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-93
Cow position: chr28:11827357-11827266 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-94
Cow position: chr28:31648937-31648844 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr28:1537574-1537476 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position: chr28:9099803-9099704 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr28:13267649-13267552 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 93

Conread position: 1-95
Cow position: chr28:23460012-23459914 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-96
Cow position: chr28:3480133-3480038 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr28:5144658-5144754 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-96
Cow position: chr28:7389191-7389095 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 65

Conread position: 1-96
Cow position: chr28:12430471-12430378 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-97
Cow position: chr28:7590318-7590414 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr28:2862729-2862628 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr28:16204465-16204567 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position: chr28:19222734-19222830 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr28:23775913-23775812 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr28:2905444-2905346 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr28:3024048-3024146 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr28:3144028-3144124 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr28:4914234-4914336 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr28:5773503-5773408 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1-99
Cow position: chr28:7328767-7328668 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-99
Cow position: chr28:7372387-7372485 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 71

Conread position: 1-99
Cow position: chr28:10456658-10456756 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr28:20124647-20124551 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr28:22132788-22132692 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr28:23253933-23254033 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 58

Conread position: 1-99
Cow position: chr28:23793439-23793535 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-99
Cow position: chr28:25498636-25498738 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr28:26103579-26103481 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr28:28766042-28766144 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr28:34230097-34229995 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-100
Cow position: chr28:11884656-11884758 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 41

Conread position: 1-101
Cow position: chr28:9390499-9390601 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-101
Cow position: chr28:10977730-10977628 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-101
Cow position: chr28:20760056-20760160 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-101
Cow position: chr28:22321289-22321186 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 94

Conread position: 1-102
Cow position: chr28:7698117-7698219 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 40

Conread position: 1-102
Cow position: chr28:16246407-16246505 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-105
Cow position: chr28:21502258-21502156 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-105
Cow position: chr28:23676004-23675905 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-109
Cow position: chr28:10888531-10888420 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 106

Conread position: 1-110
Cow position: chr28:26922501-26922608 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-120
Cow position: chr28:23621411-23621294 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-124
Cow position: chr28:2819624-2819500 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 104

Conread position: 1-125
Cow position: chr28:8681984-8682110 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 41

Conread position: 1-131
Cow position: chr28:10296057-10295922 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 1-134
Cow position: chr28:5837977-5837844 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 103

Conread position: 1-134
Cow position: chr28:13356726-13356853 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-134
Cow position: chr28:14151098-14150966 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr28:15272397-15272529 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr28:16879410-16879536 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr28:22170854-22170988 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 1-135
Cow position: chr28:3914573-3914441 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 1-135
Cow position: chr28:26743485-26743353 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-135
Cow position: chr28:26784603-26784735 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 1-135
Cow position: chr28:32813136-32813270 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 59

Conread position: 2-93
Cow position: chr28:14234835-14234744 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr28:7547484-7547581 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-101
Cow position: chr28:2898858-2898759 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-102
Cow position: chr28:19394493-19394392 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 3-98
Cow position: chr28:34844388-34844483 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr28:4282626-4282760 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 104

Conread position: 4-99
Cow position: chr28:25128124-25128217 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 4-102
Cow position: chr28:17288086-17287987 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 5-99
Cow position: chr28:16925351-16925445 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 90
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-92
Cow position: chr28:16252999-16253085 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-95
Cow position: chr28:1099783-1099872 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 83
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-95
Cow position: chr28:5771228-5771140 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 6-99
Cow position: chr28:16109803-16109710 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-103
Cow position: chr28:13241965-13242063 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 6-134
Cow position: chr28:5817705-5817579 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 66

Conread position: 7-99
Cow position: chr28:8348795-8348887 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr28:21844813-21844722 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 7-100
Cow position: chr28:3077850-3077758 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 7-100
Cow position: chr28:3078820-3078913 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-116
Cow position: chr28:16346669-16346777 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 7-134
Cow position: chr28:11585347-11585476 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 99

Conread position: 7-147
Cow position: chr28:25596490-25596352 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 9-99
Cow position: chr28:33051878-33051786 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 9-113
Cow position: chr28:9285522-9285627 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 13-98
Cow position: chr28:8372322-8372237 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 81
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr28:12619414-12619328 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr28:7751449-7751537 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr28:24646392-24646303 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-108
Cow position: chr28:3427012-3427107 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-112
Cow position: chr28:23840049-23839963 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-88
Cow position: chr29:94692-94779 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr29:2984741-2984654 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr29:1933700-1933795 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr29:2744415-2744511 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr29:13458915-13458820 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr29:9638456-9638552 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-98
Cow position: chr29:34297708-34297805 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr29:37599348-37599444 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr29:585138-585041 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 1-99
Cow position: chr29:8164000-8164104 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr29:10296583-10296681 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr29:11562475-11562373 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr29:13615787-13615884 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-99
Cow position: chr29:19338840-19338738 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr29:21443487-21443585 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr29:25088610-25088512 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr29:25737561-25737658 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 18

Conread position: 1-99
Cow position: chr29:35501794-35501889 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr29:35636283-35636183 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 27

Conread position: 1-99
Cow position: chr29:36530724-36530622 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr29:45588616-45588714 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr29:13553991-13553889 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr29:36216974-36216875 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr29:6014958-6014859 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-102
Cow position: chr29:11915677-11915572 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-102
Cow position: chr29:40902863-40902963 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-103
Cow position: chr29:4625139-4625239 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 41

Conread position: 1-105
Cow position: chr29:20178264-20178371 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 85

Conread position: 1-105
Cow position: chr29:25474768-25474660 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-107
Cow position: chr29:21236974-21236868 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 39

Conread position: 1-108
Cow position: chr29:9686145-9686251 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-110
Cow position: chr29:2071713-2071822 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 24

Conread position: 1-110
Cow position: chr29:35738409-35738521 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 106

Conread position: 1-112
Cow position: chr29:41530706-41530597 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-115
Cow position: chr29:16735145-16735263 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-117
Cow position: chr29:707093-707204 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 27

Conread position: 1-120
Cow position: chr29:34744760-34744877 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 18

Conread position: 1-120
Cow position: chr29:40166102-40165981 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 41

Conread position: 1-127
Cow position: chr29:5919464-5919594 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 106

Conread position: 1-133
Cow position: chr29:40891841-40891975 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 107

Conread position: 1-134
Cow position: chr29:686335-686466 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr29:6635957-6635829 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-134
Cow position: chr29:18878644-18878776 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr29:26734888-26734758 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr29:29066283-29066151 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 2-88
Cow position: chr29:39643031-39642946 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 80
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 2-99
Cow position: chr29:31928837-31928738 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 70

Conread position: 3-95
Cow position: chr29:4520190-4520098 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position: chr29:22162398-22162488 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr29:36356704-36356610 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 3-102
Cow position: chr29:17131752-17131855 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 3-127
Cow position: chr29:4120698-4120578 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 4-98
Cow position: chr29:109563-109470 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 4-98
Cow position: chr29:26615868-26615965 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 6-94
Cow position: chr29:36183125-36183039 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 6-102
Cow position: chr29:26263702-26263607 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 6-102
Cow position: chr29:41747292-41747196 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-109
Cow position: chr29:24119885-24119989 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 6-134
Cow position: chr29:4328284-4328159 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 7-97
Cow position: chr29:22720977-22720889 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 7-99
Cow position: chr29:356177-356085 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr29:9139259-9139167 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr29:21665821-21665729 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr29:39567538-39567447 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 7-100
Cow position: chr29:24103698-24103791 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-102
Cow position: chr29:18212131-18212226 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 85

Conread position: 7-137
Cow position: chr29:2263175-2263305 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 122, 96

Conread position: 9-102
Cow position: chr29:17409179-17409085 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 11-99
Cow position: chr29:26778731-26778643 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr29:20933550-20933465 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-110
Cow position: chr29:18735798-18735894 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 13-134
Cow position: chr29:26130628-26130508 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 15-98
Cow position: chr29:28775612-28775694 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 20-99
Cow position: chr29:43516843-43516922 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 74
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-74
Cow position: chr3:4861524-4861451 (view UCSC Genome Browser custom track)
Alignm length: 74
Alignm identity: 71
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position: chr3:3032230-3032139 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 55

Conread position: 1-94
Cow position: chr3:4087333-4087424 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-94
Cow position: chr3:65800430-65800334 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-95
Cow position: chr3:36672164-36672262 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr3:56161142-56161048 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr3:77271428-77271526 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-96
Cow position: chr3:39171648-39171744 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 1-97
Cow position: chr3:51234262-51234357 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-97
Cow position: chr3:57764062-57763962 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 1-98
Cow position: chr3:2506642-2506743 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr3:4031805-4031706 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1-98
Cow position: chr3:8393185-8393084 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position: chr3:9638759-9638855 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-98
Cow position: chr3:15661865-15661963 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 1-98
Cow position: chr3:42177998-42177898 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 94

Conread position: 1-98
Cow position: chr3:42483735-42483638 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr3:45881744-45881647 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr3:48530472-48530375 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr3:53150164-53150065 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-98
Cow position: chr3:59514945-59514849 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-98
Cow position: chr3:66885199-66885300 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-98
Cow position: chr3:70565903-70566000 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr3:79292669-79292572 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr3:81471266-81471362 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr3:210154-210059 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 27

Conread position: 1-99
Cow position: chr3:1133260-1133358 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:2216198-2216097 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr3:2674864-2674766 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:17451095-17451197 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr3:19198516-19198418 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:23471629-23471731 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr3:27289773-27289674 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr3:30463331-30463429 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:30907800-30907898 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 63

Conread position: 1-99
Cow position: chr3:36656935-36657033 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:44623065-44623160 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr3:46161010-46161108 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:51033181-51033082 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 92

Conread position: 1-99
Cow position: chr3:55124443-55124541 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:58383803-58383705 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr3:60933251-60933152 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr3:70895885-70895783 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr3:71497306-71497409 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position: chr3:78201106-78201004 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr3:79208164-79208266 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr3:79884652-79884749 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-99
Cow position: chr3:83815954-83816056 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr3:84000447-84000349 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr3:28898388-28898487 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr3:48269702-48269598 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr3:56476515-56476417 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr3:5097038-5096937 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 18

Conread position: 1-102
Cow position: chr3:17952495-17952390 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr3:18887420-18887313 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr3:27286064-27285959 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr3:33253046-33253148 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr3:53904021-53903920 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 31

Conread position: 1-102
Cow position: chr3:59000913-59001011 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-102
Cow position: chr3:59473945-59473846 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-102
Cow position: chr3:60597380-60597282 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-102
Cow position: chr3:61467444-61467339 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position: chr3:66900907-66901008 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr3:70899735-70899634 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr3:72018955-72018853 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-102
Cow position: chr3:72675927-72675821 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-109
Cow position: chr3:18607208-18607096 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 107

Conread position: 1-110
Cow position: chr3:51578485-51578594 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 103

Conread position: 1-112
Cow position: chr3:48900667-48900777 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 62

Conread position: 1-113
Cow position: chr3:35283259-35283373 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-133
Cow position: chr3:20997145-20997272 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-133
Cow position: chr3:31309520-31309653 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 123, 102

Conread position: 1-134
Cow position: chr3:2396944-2397080 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 106

Conread position: 1-134
Cow position: chr3:4461654-4461786 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr3:6403131-6403000 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1-134
Cow position: chr3:7566585-7566716 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 1-134
Cow position: chr3:14552713-14552581 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr3:16547514-16547379 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 105

Conread position: 1-134
Cow position: chr3:17222309-17222439 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 31

Conread position: 1-134
Cow position: chr3:18763728-18763597 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-134
Cow position: chr3:22872217-22872349 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr3:41367149-41367280 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr3:49650220-49650083 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 96

Conread position: 1-134
Cow position: chr3:53113008-53112871 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 107

Conread position: 1-134
Cow position: chr3:53572918-53573047 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-134
Cow position: chr3:65058537-65058405 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 58

Conread position: 1-134
Cow position: chr3:70401737-70401606 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr3:79902338-79902206 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-136
Cow position: chr3:29887587-29887723 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 38

Conread position: 1-143
Cow position: chr3:20802795-20802936 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 90

Conread position: 1-169
Cow position: chr3:25691588-25691418 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 106

Conread position: 1-185
Cow position: chr3:18854927-18854745 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 20

Conread position: 2-95
Cow position: chr3:10347189-10347096 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr3:10958395-10958491 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr3:60892466-60892369 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr3:73443253-73443350 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-101
Cow position: chr3:5100928-5101025 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 2-102
Cow position: chr3:13577352-13577450 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 2-103
Cow position: chr3:50329241-50329343 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 2-112
Cow position: chr3:18066969-18066859 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 102

Conread position: 2-112
Cow position: chr3:59604707-59604596 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 38

Conread position: 3-97
Cow position: chr3:48241454-48241360 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr3:62826786-62826885 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr3:26065838-26065738 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 3-99
Cow position: chr3:26920729-26920634 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 3-99
Cow position: chr3:38691573-38691668 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr3:51012700-51012796 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr3:55085351-55085447 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr3:68583170-68583265 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 3-103
Cow position: chr3:2903457-2903557 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-103
Cow position: chr3:53046824-53046925 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 3-134
Cow position: chr3:22907996-22908131 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 105

Conread position: 3-134
Cow position: chr3:57022405-57022278 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 4-92
Cow position: chr3:73708880-73708793 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 4-97
Cow position: chr3:16890568-16890473 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 4-98
Cow position: chr3:66292347-66292440 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 4-99
Cow position: chr3:18459688-18459783 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chr3:80581505-80581408 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 5-95
Cow position: chr3:37041258-37041168 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 84
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-115
Cow position: chr3:6873413-6873523 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 99

Conread position: 6-98
Cow position: chr3:3985160-3985068 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 85
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr3:29596224-29596130 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 6-99
Cow position: chr3:31276276-31276367 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 6-99
Cow position: chr3:49731808-49731900 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 6-131
Cow position: chr3:30179913-30179788 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 98

Conread position: 6-134
Cow position: chr3:29172213-29172086 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 6-151
Cow position: chr3:5416397-5416544 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 101

Conread position: 7-95
Cow position: chr3:16333635-16333547 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr3:13329944-13330035 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 7-101
Cow position: chr3:11640263-11640169 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-102
Cow position: chr3:12712094-12712189 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-127
Cow position: chr3:72243-72125 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 8-119
Cow position: chr3:47284665-47284556 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 8-122
Cow position: chr3:30701152-30701037 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 97

Conread position: 8-185
Cow position: chr3:81277875-81278049 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 96

Conread position: 13-93
Cow position: chr3:5374156-5374076 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 73
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-93
Cow position: chr3:45534477-45534557 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 75
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-95
Cow position: chr3:50099317-50099235 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 75
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr3:81940074-81939989 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr3:83921021-83920936 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr3:19006490-19006404 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr3:25690608-25690522 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr3:29813066-29812981 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position: chr3:65020157-65020071 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr3:71430389-71430475 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 81
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-101
Cow position: chr3:2335105-2335018 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr3:54740049-54740136 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-101
Cow position: chr3:74621174-74621262 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr3:13118168-13118079 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr3:49230833-49230745 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-102
Cow position: chr3:52147857-52147946 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-120
Cow position: chr3:4457253-4457359 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 13-127
Cow position: chr3:76923028-76923143 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 13-134
Cow position: chr3:38347024-38346906 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 15-98
Cow position: chr3:15228998-15229081 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-101
Cow position: chr3:17331588-17331503 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 81
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr4:53999656-53999743 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chr4:44612853-44612761 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr4:33971044-33971140 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 1-96
Cow position: chr4:45775491-45775585 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-96
Cow position: chr4:54468440-54468539 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-97
Cow position: chr4:9467-9561 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-97
Cow position: chr4:2536682-2536588 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1-97
Cow position: chr4:18756036-18755940 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr4:46370665-46370565 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-98
Cow position: chr4:11872057-11872158 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr4:11901712-11901809 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr4:14736345-14736247 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 1-98
Cow position: chr4:47730709-47730616 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chr4:57555821-57555720 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr4:7571261-7571162 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position: chr4:14743110-14743012 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr4:19584559-19584457 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr4:21064889-21064792 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr4:22010210-22010306 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-99
Cow position: chr4:22051619-22051716 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-99
Cow position: chr4:22138381-22138483 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr4:23060148-23060251 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr4:23445202-23445298 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-99
Cow position: chr4:23600026-23599923 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr4:23854052-23853957 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 18

Conread position: 1-99
Cow position: chr4:24119058-24119157 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr4:24372000-24372098 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr4:27276690-27276788 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr4:34641875-34641976 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr4:35981844-35981742 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr4:37342968-37342870 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr4:38999277-38999180 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr4:44839034-44839132 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr4:46550239-46550137 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr4:49089649-49089547 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr4:49794525-49794432 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 1-99
Cow position: chr4:54501598-54501696 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr4:55508565-55508662 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr4:59008519-59008616 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr4:61450620-61450521 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 92
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 1-100
Cow position: chr4:29291370-29291274 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1-101
Cow position: chr4:1915727-1915827 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr4:28772216-28772316 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr4:34310600-34310704 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr4:37620037-37620137 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 90
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr4:38945896-38945796 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr4:11099818-11099919 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr4:14414495-14414596 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr4:40823264-40823365 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr4:41186050-41186156 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 96

Conread position: 1-102
Cow position: chr4:41867295-41867194 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 94
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr4:44024963-44025068 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-102
Cow position: chr4:44782224-44782124 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-102
Cow position: chr4:56852750-56852647 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-103
Cow position: chr4:37915487-37915581 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-107
Cow position: chr4:19322227-19322334 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 1-107
Cow position: chr4:19541981-19541871 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-107
Cow position: chr4:27997538-27997431 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 48

Conread position: 1-107
Cow position: chr4:32726077-32725969 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-110
Cow position: chr4:27511123-27511014 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 103

Conread position: 1-112
Cow position: chr4:19597465-19597572 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-113
Cow position: chr4:51630512-51630395 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-116
Cow position: chr4:21531793-21531905 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-127
Cow position: chr4:33623569-33623442 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 102

Conread position: 1-131
Cow position: chr4:60897422-60897553 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 1-132
Cow position: chr4:22072819-22072954 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 105

Conread position: 1-133
Cow position: chr4:4321151-4321286 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 106

Conread position: 1-133
Cow position: chr4:20299125-20298990 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 107

Conread position: 1-134
Cow position: chr4:11194036-11193901 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 105

Conread position: 1-134
Cow position: chr4:25879246-25879113 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 118, 71

Conread position: 2-97
Cow position: chr4:52748608-52748703 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr4:19542644-19542549 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 2-99
Cow position: chr4:19708791-19708694 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr4:23646993-23647090 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr4:27529967-27529866 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-102
Cow position: chr4:19142142-19142039 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 93

Conread position: 2-104
Cow position: chr4:52177503-52177399 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 2-107
Cow position: chr4:63965140-63965245 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 102

Conread position: 2-134
Cow position: chr4:12591359-12591492 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 103

Conread position: 3-95
Cow position: chr4:12259932-12260024 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-97
Cow position: chr4:41441418-41441320 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 3-98
Cow position: chr4:19238088-19237993 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr4:23451247-23451342 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 87
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr4:39231674-39231769 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr4:46275042-46274947 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr4:15904947-15904851 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr4:22259571-22259664 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 3-103
Cow position: chr4:11090842-11090938 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 25

Conread position: 3-131
Cow position: chr4:10905610-10905737 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 3-131
Cow position: chr4:49992940-49992806 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 116

Conread position: 3-134
Cow position: chr4:3687775-3687647 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 3-134
Cow position: chr4:19097140-19097011 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 4-99
Cow position: chr4:2141593-2141499 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 4-99
Cow position: chr4:39128379-39128282 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 4-99
Cow position: chr4:48172957-48172866 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-99
Cow position: chr4:61999606-61999700 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 5-108
Cow position: chr4:51784028-51783924 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 6-87
Cow position: chr4:22546954-22547035 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 75
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-97
Cow position: chr4:26746330-26746239 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr4:53447820-53447912 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr4:10993705-10993797 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position: chr4:15462429-15462520 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 6-99
Cow position: chr4:20139672-20139766 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 87

Conread position: 6-102
Cow position: chr4:54667841-54667941 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 7-96
Cow position: chr4:19582772-19582859 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 7-96
Cow position: chr4:33612518-33612607 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr4:10472068-10471976 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr4:37935436-37935528 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr4:56514094-56514186 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr4:61969793-61969885 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-102
Cow position: chr4:48137758-48137660 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 88

Conread position: 7-102
Cow position: chr4:58687592-58687687 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-131
Cow position: chr4:52584536-52584662 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 97

Conread position: 7-136
Cow position: chr4:53763273-53763404 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 7-168
Cow position: chr4:30690567-30690406 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 12

Conread position: 8-98
Cow position: chr4:11897455-11897545 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-98
Cow position: chr4:19438304-19438212 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 8-98
Cow position: chr4:31023285-31023195 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-103
Cow position: chr4:31004561-31004656 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position: chr4:46385735-46385825 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-101
Cow position: chr4:656976-657068 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 10

Conread position: 9-134
Cow position: chr4:3850395-3850272 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 10-99
Cow position: chr4:45583286-45583375 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-99
Cow position: chr4:23847210-23847298 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-121
Cow position: chr4:41292139-41292247 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 13-98
Cow position: chr4:36893192-36893107 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr4:3251697-3251783 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr4:35940173-35940258 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-99
Cow position: chr4:42673010-42672924 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr4:47289909-47289823 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr4:51903441-51903355 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr4:62471907-62471821 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 15-99
Cow position: chr4:40576080-40576163 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-88
Cow position: chr5:30638970-30639056 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-89
Cow position: chr5:8994682-8994770 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-90
Cow position: chr5:24837062-24837151 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 83
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position: chr5:51053764-51053855 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chr5:11427354-11427451 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-95
Cow position: chr5:37646662-37646761 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-95
Cow position: chr5:43395255-43395348 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-96
Cow position: chr5:47547834-47547928 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 1-97
Cow position: chr5:15478997-15478901 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr5:4280345-4280251 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr5:6503996-6504093 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr5:24348991-24348898 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-98
Cow position: chr5:24642838-24642935 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr5:25935836-25935737 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 67

Conread position: 1-98
Cow position: chr5:26133190-26133287 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr5:32140824-32140920 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-98
Cow position: chr5:35969426-35969329 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr5:37366785-37366684 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position: chr5:45705931-45705834 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr5:61455642-61455541 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr5:65752740-65752643 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:1247160-1247062 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:3771730-3771632 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:5257408-5257511 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr5:9090136-9090237 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr5:11668299-11668392 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-99
Cow position: chr5:16938125-16938222 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1-99
Cow position: chr5:18574054-18573956 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:20127936-20127840 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position: chr5:26097179-26097083 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 22

Conread position: 1-99
Cow position: chr5:26377783-26377881 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:26541176-26541082 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-99
Cow position: chr5:28248061-28247962 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr5:28927705-28927807 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr5:32975664-32975765 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-99
Cow position: chr5:33537774-33537676 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:34506042-34506140 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:35235825-35235923 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:39936986-39936889 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 1-99
Cow position: chr5:40889400-40889498 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:41164977-41164874 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-99
Cow position: chr5:43474731-43474633 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:43929852-43929948 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr5:46104052-46104150 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:47888827-47888929 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr5:50729381-50729281 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr5:53835598-53835500 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:54530870-54530768 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr5:56135085-56135183 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:56820378-56820474 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 91
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-99
Cow position: chr5:58144720-58144819 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr5:58793727-58793829 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr5:59443364-59443465 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 86

Conread position: 1-99
Cow position: chr5:60183409-60183311 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:61600300-61600198 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-99
Cow position: chr5:62142554-62142456 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr5:67212266-67212164 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr5:28302856-28302956 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr5:41951201-41951300 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr5:54311216-54311117 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 1-101
Cow position: chr5:60520049-60519950 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1-101
Cow position: chr5:63967763-63967862 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 1-101
Cow position: chr5:65933046-65933144 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 63

Conread position: 1-102
Cow position: chr5:4617255-4617156 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr5:26467507-26467403 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 83

Conread position: 1-103
Cow position: chr5:16184971-16184870 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 93
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 100, 25

Conread position: 1-103
Cow position: chr5:43738069-43738167 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1-107
Cow position: chr5:23140689-23140794 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-107
Cow position: chr5:28230041-28229935 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-109
Cow position: chr5:12709769-12709663 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 95
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-112
Cow position: chr5:14420457-14420571 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 106

Conread position: 1-112
Cow position: chr5:31434149-31434037 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-112
Cow position: chr5:44994154-44994263 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-112
Cow position: chr5:58005131-58005018 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 94

Conread position: 1-127
Cow position: chr5:44752427-44752551 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-130
Cow position: chr5:39094436-39094307 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 37

Conread position: 1-131
Cow position: chr5:65941366-65941500 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chr5:5938208-5938076 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr5:6528566-6528432 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 104

Conread position: 1-134
Cow position: chr5:9894243-9894375 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 48

Conread position: 1-134
Cow position: chr5:15598346-15598482 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position: chr5:34049995-34049861 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 104

Conread position: 1-134
Cow position: chr5:34528445-34528313 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr5:34638768-34638637 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-134
Cow position: chr5:41522912-41523041 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 1-134
Cow position: chr5:41935913-41936047 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 22, 104

Conread position: 1-134
Cow position: chr5:42845717-42845848 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 1-134
Cow position: chr5:46509982-46510116 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 102

Conread position: 1-134
Cow position: chr5:60715471-60715603 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 1-146
Cow position: chr5:21828750-21828603 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 104

Conread position: 2-95
Cow position: chr5:63992280-63992373 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr5:28035593-28035496 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr5:30253624-30253531 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 2-99
Cow position: chr5:55942513-55942612 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 3-95
Cow position: chr5:1766462-1766554 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr5:36868627-36868532 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr5:32963748-32963843 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr5:39447649-39447746 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 3-103
Cow position: chr5:58855985-58855885 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 93
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 88

Conread position: 4-97
Cow position: chr5:45036902-45036810 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 4-98
Cow position: chr5:62826873-62826966 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 4-99
Cow position: chr5:16061611-16061706 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 18

Conread position: 4-134
Cow position: chr5:44583237-44583366 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 88

Conread position: 5-99
Cow position: chr5:45225945-45226038 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 5-99
Cow position: chr5:57890379-57890285 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-93
Cow position: chr5:24919002-24919085 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 6-98
Cow position: chr5:35145231-35145139 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr5:54350486-54350574 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 6-99
Cow position: chr5:19751731-19751638 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr5:72310593-72310500 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr5:45845818-45845909 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 7-102
Cow position: chr5:64823435-64823530 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-103
Cow position: chr5:3492077-3491982 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 17

Conread position: 7-110
Cow position: chr5:32087843-32087945 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 8-99
Cow position: chr5:22102436-22102527 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position: chr5:72564637-72564548 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 11-95
Cow position: chr5:9859845-9859929 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-98
Cow position: chr5:49685408-49685494 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 13-99
Cow position: chr5:1104999-1105085 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr5:27403371-27403458 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 13-99
Cow position: chr5:31640299-31640213 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr5:32153444-32153530 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr5:46322940-46323026 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 80
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr5:57074463-57074549 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-109
Cow position: chr5:41303219-41303314 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 13-134
Cow position: chr5:6045159-6045038 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 91

Conread position: 13-134
Cow position: chr5:33661726-33661606 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 13-135
Cow position: chr5:50573628-50573507 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 15-133
Cow position: chr5:64176251-64176369 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 114

Conread position: 1-88
Cow position: chr6:35613516-35613603 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chr6:17220556-17220644 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-92
Cow position: chr6:607164-607069 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-94
Cow position: chr6:32210730-32210822 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-94
Cow position: chr6:37467641-37467734 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr6:389068-388975 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 84
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-95
Cow position: chr6:21812628-21812534 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr6:47305237-47305143 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr6:53731419-53731325 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr6:9751142-9751237 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr6:6117651-6117747 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 90
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr6:21534953-21534861 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chr6:611460-611362 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-98
Cow position: chr6:7190221-7190318 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr6:16288522-16288617 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-98
Cow position: chr6:42565582-42565487 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-98
Cow position: chr6:55546263-55546359 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 1-98
Cow position: chr6:66433846-66433749 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr6:67950856-67950760 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr6:5095656-5095750 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr6:5673131-5673029 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr6:8965991-8965890 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 89

Conread position: 1-99
Cow position: chr6:9008713-9008811 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:12337882-12337785 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr6:12500762-12500660 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr6:12629922-12629825 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr6:14949581-14949681 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1-99
Cow position: chr6:16411093-16410996 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr6:17067922-17068019 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr6:17997417-17997515 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:19508533-19508630 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr6:20230928-20231025 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-99
Cow position: chr6:21231434-21231336 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:23248061-23248163 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr6:35181355-35181453 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:38441080-38440982 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:44194644-44194745 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 28

Conread position: 1-99
Cow position: chr6:50445865-50445959 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-99
Cow position: chr6:51398699-51398601 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:54864773-54864866 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr6:54885015-54885113 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr6:60350397-60350499 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr6:66131201-66131108 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-101
Cow position: chr6:5609542-5609642 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr6:16706903-16706805 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 91
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 1-101
Cow position: chr6:44098982-44098883 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 1-101
Cow position: chr6:59620567-59620467 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr6:64431837-64431737 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr6:5330049-5329948 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 92
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr6:13687914-13688014 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-102
Cow position: chr6:19695703-19695604 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr6:29210402-29210298 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-103
Cow position: chr6:25407494-25407596 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr6:37634687-37634585 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr6:47150677-47150575 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position: chr6:14063762-14063866 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-110
Cow position: chr6:53519725-53519835 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 1-112
Cow position: chr6:10106094-10106208 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 1-112
Cow position: chr6:16492018-16492132 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 106

Conread position: 1-120
Cow position: chr6:51463714-51463837 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 1-120
Cow position: chr6:54140706-54140594 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-129
Cow position: chr6:2896651-2896524 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 46

Conread position: 1-131
Cow position: chr6:61575505-61575371 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 79

Conread position: 1-134
Cow position: chr6:642675-642811 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position: chr6:1783875-1784006 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 5

Conread position: 1-134
Cow position: chr6:2012917-2012785 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr6:8637173-8637041 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr6:13741593-13741463 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 1-134
Cow position: chr6:16737918-16737787 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1-134
Cow position: chr6:21311856-21311992 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 104

Conread position: 1-134
Cow position: chr6:24781661-24781797 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 96

Conread position: 1-134
Cow position: chr6:31525950-31525815 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 94

Conread position: 1-134
Cow position: chr6:54369002-54369133 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chr6:58076122-58075991 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-135
Cow position: chr6:7801467-7801600 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 91

Conread position: 1-135
Cow position: chr6:46245423-46245559 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 129

Conread position: 1-137
Cow position: chr6:59301923-59302062 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 1-143
Cow position: chr6:10695769-10695625 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 75

Conread position: 1-166
Cow position: chr6:13040355-13040184 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 115

Conread position: 2-95
Cow position: chr6:16423600-16423503 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 2-95
Cow position: chr6:36470666-36470759 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-97
Cow position: chr6:2607513-2607415 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 2-99
Cow position: chr6:53460675-53460771 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 2-99
Cow position: chr6:69500221-69500130 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 2-102
Cow position: chr6:60442315-60442216 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 2-123
Cow position: chr6:37603420-37603300 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 2-134
Cow position: chr6:6343323-6343192 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 2-134
Cow position: chr6:35990326-35990455 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 3-97
Cow position: chr6:55607910-55608004 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 88
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr6:38218568-38218472 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 89
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr6:49685481-49685385 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr6:56502205-56502109 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr6:68049331-68049236 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 3-101
Cow position: chr6:51674810-51674716 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 3-102
Cow position: chr6:52025758-52025858 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 3-134
Cow position: chr6:56849910-56849784 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-183
Cow position: chr6:14850818-14850999 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 4-101
Cow position: chr6:15266369-15266469 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 4-102
Cow position: chr6:1886769-1886866 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 4-103
Cow position: chr6:6060664-6060762 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 15

Conread position: 4-103
Cow position: chr6:25773488-25773585 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-131
Cow position: chr6:36196108-36195981 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 6-99
Cow position: chr6:6098389-6098482 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 85
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr6:7539467-7539373 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 6-99
Cow position: chr6:21110863-21110769 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 88
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position: chr6:18988109-18987983 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position: chr6:50119894-50120022 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 97

Conread position: 7-93
Cow position: chr6:10176413-10176497 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 7-95
Cow position: chr6:16700151-16700063 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-95
Cow position: chr6:59015669-59015757 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 80
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-95
Cow position: chr6:62925101-62925189 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-97
Cow position: chr6:3719114-3719204 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-97
Cow position: chr6:24031267-24031177 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr6:29077621-29077529 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr6:32867314-32867406 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-103
Cow position: chr6:9375482-9375579 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 7-131
Cow position: chr6:39994565-39994694 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 100

Conread position: 7-134
Cow position: chr6:48281888-48281761 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 97

Conread position: 8-101
Cow position: chr6:44078412-44078320 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 8-102
Cow position: chr6:22986097-22986193 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 83

Conread position: 8-134
Cow position: chr6:3592014-3591889 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 9-99
Cow position: chr6:35769592-35769682 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-134
Cow position: chr6:47540417-47540292 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 95

Conread position: 10-99
Cow position: chr6:23695884-23695798 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 11-99
Cow position: chr6:38641386-38641298 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 82
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr6:7694469-7694553 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 13-99
Cow position: chr6:50746866-50746781 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 13-99
Cow position: chr6:65676143-65676057 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr6:65711713-65711627 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-112
Cow position: chr6:130279-130376 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 15-98
Cow position: chr6:10400011-10400094 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-79
Cow position: chr7:43103555-43103633 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 72
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr7:51319700-51319609 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-92
Cow position: chr7:11715608-11715513 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-94
Cow position: chr7:43109632-43109724 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-94
Cow position: chr7:52295032-52294943 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1-95
Cow position: chr7:46928889-46928791 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-95
Cow position: chr7:51910033-51909939 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr7:57259127-57259224 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1-97
Cow position: chr7:40067559-40067462 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-97
Cow position: chr7:40566972-40566878 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-97
Cow position: chr7:50859913-50859814 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 94

Conread position: 1-97
Cow position: chr7:59660648-59660552 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 20

Conread position: 1-97
Cow position: chr7:63023040-63022944 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr7:8868724-8868622 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-98
Cow position: chr7:13645454-13645551 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr7:15608314-15608214 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 94

Conread position: 1-98
Cow position: chr7:34433379-34433476 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 69

Conread position: 1-98
Cow position: chr7:59168177-59168081 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 18

Conread position: 1-98
Cow position: chr7:61601478-61601579 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr7:1761618-1761521 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1-99
Cow position: chr7:3159467-3159371 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr7:5914107-5914005 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position: chr7:8785866-8785769 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr7:11160097-11160199 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr7:13928254-13928352 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:15347244-15347346 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr7:16022198-16022104 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr7:17967217-17967316 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1-99
Cow position: chr7:20415404-20415501 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr7:21650003-21649903 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-99
Cow position: chr7:23456916-23457014 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:23619185-23619283 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:25083596-25083494 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr7:25393188-25393092 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position: chr7:26631911-26632009 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:26888060-26888162 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr7:26911536-26911635 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 93
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position: chr7:28324539-28324437 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr7:32221914-32221820 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr7:36717561-36717659 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:37142464-37142562 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:37361788-37361686 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr7:39167365-39167267 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:39415809-39415707 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr7:39930197-39930100 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-99
Cow position: chr7:40121365-40121268 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 18

Conread position: 1-99
Cow position: chr7:43711119-43711022 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr7:45658486-45658582 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1-99
Cow position: chr7:64269086-64269183 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 1-99
Cow position: chr7:66894640-66894738 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr7:68173250-68173351 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 94

Conread position: 1-100
Cow position: chr7:62603083-62602985 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-101
Cow position: chr7:1558636-1558536 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr7:3728991-3728891 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr7:10512809-10512912 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-101
Cow position: chr7:23568836-23568940 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-101
Cow position: chr7:38696748-38696648 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-101
Cow position: chr7:52718734-52718834 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr7:11176806-11176906 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-102
Cow position: chr7:23818835-23818730 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-102
Cow position: chr7:27283583-27283478 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-102
Cow position: chr7:28563482-28563583 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr7:41259636-41259737 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-103
Cow position: chr7:1269709-1269816 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-103
Cow position: chr7:64331056-64330955 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 78

Conread position: 1-107
Cow position: chr7:38429867-38429758 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-107
Cow position: chr7:63112876-63112977 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-110
Cow position: chr7:21573186-21573078 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 48

Conread position: 1-110
Cow position: chr7:46823569-46823460 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 103

Conread position: 1-112
Cow position: chr7:4418562-4418676 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 106

Conread position: 1-112
Cow position: chr7:15855409-15855520 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 100, 12

Conread position: 1-112
Cow position: chr7:42431728-42431614 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 106

Conread position: 1-120
Cow position: chr7:58614690-58614576 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-127
Cow position: chr7:37952083-37951956 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 94

Conread position: 1-134
Cow position: chr7:14076368-14076502 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 104

Conread position: 1-134
Cow position: chr7:33068399-33068532 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 103

Conread position: 1-134
Cow position: chr7:40008718-40008586 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr7:40710012-40709877 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 60

Conread position: 1-134
Cow position: chr7:43484661-43484793 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr7:59691973-59691841 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-135
Cow position: chr7:34004267-34004135 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 2-98
Cow position: chr7:21240210-21240305 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr7:255909-256005 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 2-99
Cow position: chr7:28095785-28095688 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-102
Cow position: chr7:20016331-20016431 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-102
Cow position: chr7:44095044-44095144 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 91
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position: chr7:45592941-45592811 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 54

Conread position: 2-133
Cow position: chr7:42894345-42894220 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 15

Conread position: 2-137
Cow position: chr7:53613045-53612910 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 101

Conread position: 3-95
Cow position: chr7:12659095-12659191 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 3-96
Cow position: chr7:14029234-14029141 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 86
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-96
Cow position: chr7:55688299-55688392 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr7:19267471-19267566 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr7:32693156-32693247 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-99
Cow position: chr7:13219492-13219587 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr7:17782778-17782870 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 3-99
Cow position: chr7:28090136-28090043 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 3-99
Cow position: chr7:34569102-34569002 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 3-99
Cow position: chr7:39042503-39042406 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 3-99
Cow position: chr7:39444702-39444799 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 3-99
Cow position: chr7:40321384-40321291 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 3-102
Cow position: chr7:47775766-47775668 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 3-119
Cow position: chr7:40189455-40189341 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-131
Cow position: chr7:56820673-56820802 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 100

Conread position: 3-134
Cow position: chr7:35652182-35652311 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 4-97
Cow position: chr7:5242015-5241923 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 87
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 4-99
Cow position: chr7:13593673-13593579 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 4-99
Cow position: chr7:62793683-62793585 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 4-136
Cow position: chr7:52776858-52776989 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 85

Conread position: 5-95
Cow position: chr7:40303368-40303458 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr7:25512225-25512317 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-98
Cow position: chr7:39518197-39518104 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 6-99
Cow position: chr7:18388503-18388596 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr7:25867610-25867703 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-134
Cow position: chr7:32824358-32824484 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 6-134
Cow position: chr7:42223051-42223178 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 6-182
Cow position: chr7:54783914-54784092 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 97

Conread position: 7-95
Cow position: chr7:42244799-42244887 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr7:23646497-23646405 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chr7:56838604-56838695 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 7-99
Cow position: chr7:64573166-64573258 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-183
Cow position: chr7:24873201-24873378 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 9-99
Cow position: chr7:8813034-8813124 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-99
Cow position: chr7:12212714-12212804 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-99
Cow position: chr7:44986545-44986460 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 10-115
Cow position: chr7:6077821-6077924 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 82

Conread position: 13-99
Cow position: chr7:20537250-20537165 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 13-100
Cow position: chr7:14005759-14005672 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chr7:26012312-26012223 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-132
Cow position: chr7:46116763-46116884 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 14-132
Cow position: chr7:37568917-37568801 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 15-99
Cow position: chr7:19798046-19798130 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 17-98
Cow position: chr7:60246054-60245974 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 77
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 19-99
Cow position: chr7:21315991-21315911 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 74
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 20-134
Cow position: chr7:1375575-1375463 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 1-83
Cow position: chr8:24364074-24364155 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-86
Cow position: chr8:37147988-37147903 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr8:54572512-54572425 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-91
Cow position: chr8:45690035-45690122 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-93
Cow position: chr8:8097398-8097493 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 1-93
Cow position: chr8:55711262-55711170 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr8:20306854-20306758 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-95
Cow position: chr8:33585030-33584936 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr8:35504367-35504461 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr8:60488757-60488851 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 88
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr8:17180157-17180251 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1-96
Cow position: chr8:36375640-36375738 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 63

Conread position: 1-97
Cow position: chr8:5225169-5225264 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-97
Cow position: chr8:21268655-21268750 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-97
Cow position: chr8:48437531-48437626 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr8:4940441-4940537 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 90
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr8:5485008-5485108 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 94

Conread position: 1-98
Cow position: chr8:19223933-19224030 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr8:28294973-28295073 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-98
Cow position: chr8:28884699-28884598 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chr8:35990919-35990818 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chr8:39066081-39065983 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr8:580210-580307 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr8:1114924-1115021 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 1-99
Cow position: chr8:3891553-3891655 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-99
Cow position: chr8:6233029-6233127 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr8:10942866-10942964 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr8:10970700-10970598 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr8:21961117-21961021 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 1-99
Cow position: chr8:24201775-24201674 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 93

Conread position: 1-99
Cow position: chr8:26625743-26625645 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr8:27955568-27955665 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr8:32295863-32295968 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr8:33814812-33814713 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr8:35966161-35966262 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-99
Cow position: chr8:37571836-37571936 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 65

Conread position: 1-99
Cow position: chr8:38356982-38357079 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-99
Cow position: chr8:39144627-39144533 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-99
Cow position: chr8:39475313-39475210 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chr8:42112929-42113031 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chr8:43168156-43168253 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1-99
Cow position: chr8:44450016-44450113 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 89

Conread position: 1-99
Cow position: chr8:48513140-48513236 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-99
Cow position: chr8:51862120-51862023 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr8:53485575-53485477 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 92
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr8:55926071-55925969 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chr8:60746515-60746415 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 67

Conread position: 1-100
Cow position: chr8:19818253-19818351 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-100
Cow position: chr8:45664641-45664544 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chr8:1472930-1472831 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 1-101
Cow position: chr8:4821358-4821456 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-101
Cow position: chr8:25083138-25083038 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-102
Cow position: chr8:844070-844172 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 64

Conread position: 1-102
Cow position: chr8:10337155-10337260 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 1-102
Cow position: chr8:39630643-39630538 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-102
Cow position: chr8:45245150-45245250 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-102
Cow position: chr8:56248838-56248735 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 92

Conread position: 1-107
Cow position: chr8:47461737-47461628 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 1-108
Cow position: chr8:28509619-28509729 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-109
Cow position: chr8:22183445-22183333 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 108

Conread position: 1-112
Cow position: chr8:42762562-42762668 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-112
Cow position: chr8:48955785-48955675 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-119
Cow position: chr8:24952209-24952092 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 97

Conread position: 1-124
Cow position: chr8:4563555-4563681 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 106

Conread position: 1-127
Cow position: chr8:834239-834111 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 94

Conread position: 1-127
Cow position: chr8:1834790-1834665 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 1-131
Cow position: chr8:11606203-11606074 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position: chr8:17103551-17103679 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-133
Cow position: chr8:20563896-20564028 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 39

Conread position: 1-134
Cow position: chr8:2164034-2164170 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 1-134
Cow position: chr8:3704491-3704359 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chr8:24371847-24371980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 103

Conread position: 1-134
Cow position: chr8:61567498-61567630 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-186
Cow position: chr8:4559191-4559371 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 2-88
Cow position: chr8:30244961-30245047 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-94
Cow position: chr8:1303773-1303681 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-95
Cow position: chr8:37604141-37604237 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 62

Conread position: 2-98
Cow position: chr8:54031745-54031649 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr8:18290196-18290293 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-99
Cow position: chr8:28185786-28185886 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 17

Conread position: 2-99
Cow position: chr8:32988611-32988516 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 2-99
Cow position: chr8:41627252-41627350 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 2-118
Cow position: chr8:8668332-8668445 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 2-128
Cow position: chr8:24390331-24390459 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 3-96
Cow position: chr8:35211284-35211380 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 81

Conread position: 3-99
Cow position: chr8:225498-225594 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr8:11612414-11612318 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr8:19642337-19642241 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 89
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr8:47342601-47342505 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chr8:58183438-58183538 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 3-103
Cow position: chr8:37809757-37809861 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 92

Conread position: 3-104
Cow position: chr8:39039898-39039794 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 92

Conread position: 3-134
Cow position: chr8:43191159-43191288 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 4-98
Cow position: chr8:23026570-23026475 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 29

Conread position: 4-98
Cow position: chr8:55827962-55827864 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 4-101
Cow position: chr8:35827941-35828036 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 89
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 4-107
Cow position: chr8:9681536-9681636 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 4-110
Cow position: chr8:20683835-20683733 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 4-134
Cow position: chr8:26651170-26651042 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 37

Conread position: 6-95
Cow position: chr8:44437632-44437543 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr8:9517317-9517410 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr8:48775680-48775586 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 6-102
Cow position: chr8:21826886-21826980 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 6-103
Cow position: chr8:20339152-20339051 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 6-107
Cow position: chr8:20836991-20836890 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-127
Cow position: chr8:31266323-31266443 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 7-96
Cow position: chr8:58377701-58377791 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 83
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 7-99
Cow position: chr8:20212646-20212736 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 7-102
Cow position: chr8:47861074-47861170 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 7-109
Cow position: chr8:24867883-24867984 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 8-104
Cow position: chr8:36249559-36249655 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-102
Cow position: chr8:53642562-53642655 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-134
Cow position: chr8:45878905-45878783 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 9-134
Cow position: chr8:45925487-45925365 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 10-99
Cow position: chr8:10081787-10081696 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 10-99
Cow position: chr8:38572419-38572509 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 13-99
Cow position: chr8:17669886-17669970 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 13-99
Cow position: chr8:29262640-29262553 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 13-99
Cow position: chr8:31776040-31775954 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr8:38358282-38358196 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr8:39807089-39807176 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 80
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 13-99
Cow position: chr8:47328200-47328114 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-132
Cow position: chr8:46799446-46799563 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 13-134
Cow position: chr8:32311700-32311581 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 13-134
Cow position: chr8:50708905-50708784 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 91

Conread position: 13-146
Cow position: chr8:36059697-36059565 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 14-134
Cow position: chr8:12058568-12058450 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 14-134
Cow position: chr8:47665050-47665170 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 90

Conread position: 19-98
Cow position: chr8:15395004-15395083 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 73
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-107
Cow position: chr8:7681246-7681331 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 21-134
Cow position: chr8:24513289-24513401 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 1-88
Cow position: chr9:5399890-5399977 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position: chr9:5433804-5433893 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-89
Cow position: chr9:38875405-38875315 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-92
Cow position: chr9:5327425-5327516 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr9:1751505-1751599 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chr9:6225281-6225187 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr9:30749414-30749319 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chr9:35904580-35904485 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr9:5319800-5319896 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr9:8546489-8546585 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chr9:20738874-20738969 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-98
Cow position: chr9:9516599-9516503 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-98
Cow position: chr9:21888340-21888437 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr9:25958588-25958681 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-98
Cow position: chr9:33598152-33598249 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 90
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chr9:34697126-34697028 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 92

Conread position: 1-98
Cow position: chr9:36354110-36354014 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-98
Cow position: chr9:41995881-41995982 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 1-98
Cow position: chr9:49764826-49764924 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-99
Cow position: chr9:3070252-3070154 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:5246021-5246117 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chr9:5393218-5393319 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 93

Conread position: 1-99
Cow position: chr9:10877697-10877597 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-99
Cow position: chr9:13993831-13993933 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr9:13994357-13994457 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chr9:17871936-17871839 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr9:18002778-18002680 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:18140123-18140026 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-99
Cow position: chr9:19539264-19539366 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-99
Cow position: chr9:33100970-33100873 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 88

Conread position: 1-99
Cow position: chr9:35101038-35101136 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:35850070-35850167 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr9:36999890-36999792 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:37528624-37528725 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-99
Cow position: chr9:41513790-41513888 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:42498000-42498098 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 93
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:51620607-51620704 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chr9:52484746-52484648 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chr9:55084126-55084028 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-100
Cow position: chr9:32371590-32371490 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-100
Cow position: chr9:49689107-49689207 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chr9:5219012-5218909 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 93

Conread position: 1-101
Cow position: chr9:26403956-26404060 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-101
Cow position: chr9:42585453-42585355 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-101
Cow position: chr9:42998296-42998200 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-102
Cow position: chr9:5501023-5501123 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 1-102
Cow position: chr9:27345271-27345165 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-102
Cow position: chr9:28726550-28726454 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-103
Cow position: chr9:32812515-32812620 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 94

Conread position: 1-103
Cow position: chr9:54681674-54681775 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 1-108
Cow position: chr9:38961263-38961159 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 19

Conread position: 1-109
Cow position: chr9:9199613-9199507 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-109
Cow position: chr9:28773292-28773395 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-112
Cow position: chr9:21459987-21459876 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 103

Conread position: 1-113
Cow position: chr9:17928942-17929056 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 104

Conread position: 1-114
Cow position: chr9:26477730-26477843 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 103

Conread position: 1-116
Cow position: chr9:5532120-5532237 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 1-127
Cow position: chr9:32787937-32787810 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 91

Conread position: 1-131
Cow position: chr9:54997856-54997723 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 1-132
Cow position: chr9:13802061-13802195 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 1-133
Cow position: chr9:18381030-18381162 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 101

Conread position: 1-134
Cow position: chr9:24726505-24726375 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 1-134
Cow position: chr9:27697559-27697426 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 101

Conread position: 1-134
Cow position: chr9:35167343-35167471 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 27

Conread position: 1-134
Cow position: chr9:50080875-50080743 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 123, 102

Conread position: 2-96
Cow position: chr9:54611058-54610965 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 2-97
Cow position: chr9:6952262-6952357 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 79

Conread position: 2-98
Cow position: chr9:30664610-30664511 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 93

Conread position: 2-99
Cow position: chr9:5763462-5763361 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 2-99
Cow position: chr9:29006733-29006829 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-99
Cow position: chr9:29184961-29184865 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 90
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 2-101
Cow position: chr9:36623279-36623181 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 2-102
Cow position: chr9:1950088-1950191 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 59

Conread position: 2-102
Cow position: chr9:64050384-64050283 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 2-112
Cow position: chr9:7409954-7410063 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 99
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 2-134
Cow position: chr9:6933902-6933769 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 42

Conread position: 3-94
Cow position: chr9:22151914-22151823 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-95
Cow position: chr9:5161891-5161801 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-96
Cow position: chr9:6879939-6880035 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 91

Conread position: 3-98
Cow position: chr9:18008690-18008599 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 3-98
Cow position: chr9:30138299-30138393 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 3-99
Cow position: chr9:27077076-27076982 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 3-99
Cow position: chr9:33940780-33940876 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-97
Cow position: chr9:6089272-6089364 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 4-99
Cow position: chr9:8534511-8534413 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 4-99
Cow position: chr9:20989280-20989185 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chr9:49544888-49544792 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 58

Conread position: 4-100
Cow position: chr9:34919092-34918996 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-102
Cow position: chr9:34944361-34944458 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 4-109
Cow position: chr9:62357355-62357253 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 5-94
Cow position: chr9:31347129-31347218 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-134
Cow position: chr9:64155685-64155553 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 102

Conread position: 6-99
Cow position: chr9:31077502-31077409 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chr9:52407342-52407439 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 6-115
Cow position: chr9:5756827-5756719 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 6-131
Cow position: chr9:53602588-53602714 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 98

Conread position: 7-95
Cow position: chr9:38344071-38344159 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-96
Cow position: chr9:56453511-56453598 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 7-99
Cow position: chr9:58439606-58439513 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 86

Conread position: 7-100
Cow position: chr9:9490972-9491063 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 7-127
Cow position: chr9:36844009-36844129 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 84

Conread position: 8-99
Cow position: chr9:1855458-1855548 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 8-99
Cow position: chr9:34400216-34400308 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 9-102
Cow position: chr9:15215502-15215409 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 84
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-105
Cow position: chr9:32732505-32732409 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 13-95
Cow position: chr9:51557179-51557097 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-96
Cow position: chr9:13670819-13670902 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chr9:47869190-47869275 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 13-133
Cow position: chr9:8418192-8418074 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 13-134
Cow position: chr9:3807554-3807434 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-86
Cow position: chrX:17725859-17725774 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-90
Cow position: chrX:17908396-17908488 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 1-93
Cow position: chrX:26285864-26285772 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-93
Cow position: chrX:26875998-26876089 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-94
Cow position: chrX:7497128-7497035 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chrX:21665709-21665802 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 89
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-94
Cow position: chrX:34543671-34543579 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-95
Cow position: chrX:6640010-6639916 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-95
Cow position: chrX:7718743-7718645 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-95
Cow position: chrX:18695035-18695129 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 86
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-96
Cow position: chrX:11073303-11073399 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 1-96
Cow position: chrX:46429973-46430068 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chrX:10916634-10916543 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-97
Cow position: chrX:13177580-13177676 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-97
Cow position: chrX:20752139-20752048 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 1-97
Cow position: chrX:29542334-29542430 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-98
Cow position: chrX:678679-678780 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-98
Cow position: chrX:6563396-6563300 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-98
Cow position: chrX:20887761-20887856 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-98
Cow position: chrX:26625788-26625889 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-98
Cow position: chrX:27174880-27174782 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1-98
Cow position: chrX:33466496-33466401 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-98
Cow position: chrX:35609873-35609774 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chrX:619119-619221 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chrX:1514517-1514614 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-99
Cow position: chrX:2523841-2523943 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chrX:4043962-4044063 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 93

Conread position: 1-99
Cow position: chrX:8797136-8797035 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 91

Conread position: 1-99
Cow position: chrX:9416808-9416906 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chrX:10437778-10437878 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-99
Cow position: chrX:11856313-11856216 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 1-99
Cow position: chrX:12979942-12980044 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chrX:13868578-13868481 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chrX:13912964-13912866 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 12

Conread position: 1-99
Cow position: chrX:14900837-14900934 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chrX:15147304-15147399 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-99
Cow position: chrX:15485742-15485841 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-99
Cow position: chrX:20697722-20697821 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 92
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-99
Cow position: chrX:21795380-21795283 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chrX:23514130-23514231 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 1-99
Cow position: chrX:23970269-23970176 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-99
Cow position: chrX:25238061-25237964 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chrX:27394129-27394227 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chrX:29509559-29509657 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chrX:31442937-31443034 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 90
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 1-99
Cow position: chrX:32128098-32128193 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 33

Conread position: 1-99
Cow position: chrX:32870898-32870999 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 67

Conread position: 1-99
Cow position: chrX:35268772-35268677 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-99
Cow position: chrX:35542780-35542678 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chrX:37843605-37843507 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chrX:38963990-38963896 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-99
Cow position: chrX:42247295-42247397 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 1-99
Cow position: chrX:42855297-42855195 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-99
Cow position: chrX:43527388-43527290 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-99
Cow position: chrX:47344183-47344081 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-100
Cow position: chrX:877139-877237 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-101
Cow position: chrX:4632967-4633066 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-101
Cow position: chrX:21593172-21593068 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-101
Cow position: chrX:42499142-42499244 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-101
Cow position: chrX:48684342-48684438 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-102
Cow position: chrX:42492630-42492730 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 1-103
Cow position: chrX:18812139-18812040 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-104
Cow position: chrX:41238477-41238581 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 92

Conread position: 1-107
Cow position: chrX:11633563-11633458 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-107
Cow position: chrX:36975834-36975729 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 1-107
Cow position: chrX:37489611-37489509 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-107
Cow position: chrX:38006879-38006989 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-109
Cow position: chrX:2467768-2467657 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 106

Conread position: 1-109
Cow position: chrX:27680284-27680181 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-109
Cow position: chrX:38967535-38967428 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-110
Cow position: chrX:19019227-19019335 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 6

Conread position: 1-111
Cow position: chrX:24105511-24105400 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1-112
Cow position: chrX:34238605-34238497 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1-120
Cow position: chrX:7382208-7382090 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-127
Cow position: chrX:21663197-21663069 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 78

Conread position: 1-127
Cow position: chrX:41743796-41743673 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 1-128
Cow position: chrX:17794870-17794744 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 1-131
Cow position: chrX:25283265-25283390 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-133
Cow position: chrX:22821936-22821802 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 107

Conread position: 1-134
Cow position: chrX:8899913-8899777 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chrX:14924884-14924753 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 1-134
Cow position: chrX:16531882-16531752 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-134
Cow position: chrX:20582914-20582783 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 19

Conread position: 1-134
Cow position: chrX:28111391-28111260 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-134
Cow position: chrX:31949049-31949178 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-134
Cow position: chrX:34401883-34401750 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 103

Conread position: 1-134
Cow position: chrX:34441567-34441697 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-134
Cow position: chrX:34502807-34502673 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 93

Conread position: 1-134
Cow position: chrX:38439363-38439226 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 108

Conread position: 1-134
Cow position: chrX:40183461-40183597 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 106

Conread position: 1-134
Cow position: chrX:40452324-40452460 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 106

Conread position: 1-134
Cow position: chrX:40647862-40647731 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 2-99
Cow position: chrX:33519505-33519404 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 2-107
Cow position: chrX:4942870-4942970 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 2-134
Cow position: chrX:9997451-9997580 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 3-96
Cow position: chrX:39558464-39558557 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chrX:22074683-22074587 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chrX:23091764-23091668 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 92
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-99
Cow position: chrX:33020368-33020273 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 3-107
Cow position: chrX:13265737-13265840 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 92
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 3-112
Cow position: chrX:42470058-42470162 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-134
Cow position: chrX:42874864-42874731 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 92

Conread position: 4-98
Cow position: chrX:17497977-17497884 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 4-99
Cow position: chrX:37574738-37574643 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-99
Cow position: chrX:45412773-45412868 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-107
Cow position: chrX:33855351-33855453 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 4-134
Cow position: chrX:32020240-32020369 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 5-99
Cow position: chrX:4269186-4269281 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 5-100
Cow position: chrX:48195159-48195255 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 5-133
Cow position: chrX:41167084-41167208 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 5-134
Cow position: chrX:23497784-23497910 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 6-99
Cow position: chrX:2206664-2206757 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-99
Cow position: chrX:29193885-29193795 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 37

Conread position: 6-99
Cow position: chrX:35413508-35413419 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 6-134
Cow position: chrX:28846999-28847126 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 6-152
Cow position: chrX:42339056-42339202 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 97

Conread position: 7-86
Cow position: chrX:917493-917572 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 74
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-98
Cow position: chrX:27509141-27509232 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-98
Cow position: chrX:45787533-45787442 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-99
Cow position: chrX:19015317-19015229 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-99
Cow position: chrX:27432041-27432132 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 12

Conread position: 7-110
Cow position: chrX:32623461-32623359 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 7-131
Cow position: chrX:42086740-42086616 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-98
Cow position: chrX:27176442-27176532 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-99
Cow position: chrX:33205114-33205205 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-297
Cow position: chrX:16324086-16324373 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 91

Conread position: 9-98
Cow position: chrX:151777-151689 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 9-98
Cow position: chrX:616530-616618 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 81
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 9-99
Cow position: chrX:19690094-19690005 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 9-101
Cow position: chrX:38549325-38549233 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 84
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chrX:42461870-42461982 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 13-95
Cow position: chrX:29601960-29602040 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 13-98
Cow position: chrX:17231607-17231522 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chrX:17662724-17662810 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chrX:26440907-26440993 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-99
Cow position: chrX:42381227-42381313 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-102
Cow position: chrX:22115409-22115498 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-134
Cow position: chrX:23563924-23564044 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 14-103
Cow position: chrX:27446560-27446470 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 14-130
Cow position: chrX:7721856-7721741 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 17-89
Cow position: chrX:39938654-39938726 (view UCSC Genome Browser custom track)
Alignm length: 73
Alignm identity: 71
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0