Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010022G04.5.5 |
| Conread position: | 2102-2536 |
| Cow position: | chr11:9705872-9705444 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 121 |
| Conread position: | 118-2276 |
| Cow position: | chr12:33773187-33771017 (view UCSC Genome Browser custom track) |
| Alignm length: | 2171 |
| Alignm identity: | 1664 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 669, 0 |
| Conread position: | 2314-2555 |
| Cow position: | chr12:7118695-7118449 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 121 |
| Conread position: | 118-224 |
| Cow position: | chr21:46565467-46565361 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 241-603 |
| Cow position: | chr21:46565255-46564893 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 607-744 |
| Cow position: | chr21:46564580-46564443 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 743-1050 |
| Cow position: | chr21:46564158-46563839 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1049-1214 |
| Cow position: | chr21:46563669-46563504 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1219-1412 |
| Cow position: | chr21:46563323-46563130 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1406-1557 |
| Cow position: | chr21:46563028-46562877 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1555-1827 |
| Cow position: | chr21:46562717-46562445 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1822-2159 |
| Cow position: | chr21:46562162-46561825 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-241 |
| Cow position: | chr23:18192276-18192437 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 241-448 |
| Cow position: | chr23:17555303-17555096 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-612 |
| Cow position: | chr23:17555003-17554836 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 515-1050 |
| Cow position: | chr23:17554423-17553888 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 138 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 607-744 |
| Cow position: | chr23:17554701-17554564 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1049-1216 |
| Cow position: | chr23:17553539-17553372 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1217-1407 |
| Cow position: | chr23:17553156-17552966 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1403-1558 |
| Cow position: | chr23:17552870-17552715 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1657-1832 |
| Cow position: | chr23:17552576-17552400 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 118 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 1823-2159 |
| Cow position: | chr23:17552161-17551825 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2158-2529 |
| Cow position: | chr23:17551733-17551366 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 130 |
| Conread position: | 2307-2515 |
| Cow position: | chr29:38954331-38954123 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 118-533 |
| Cow position: | chr7:21553859-21554267 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 1957-2267 |
| Cow position: | chr7:34680880-34681180 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 1-873 |
| Cow position: | chrX:38214823-38215696 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 780 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 742-2469 |
| Cow position: | chrX:38215605-38217333 (view UCSC Genome Browser custom track) |
| Alignm length: | 1738 |
| Alignm identity: | 1526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 1447 |