Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010044D06.5 |
| Conread position: | 1-734 |
| Cow position: | chr13:19896792-19897531 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 688 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 757-866 |
| Cow position: | chr13:19900758-19900866 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 861-1024 |
| Cow position: | chr13:19900947-19901110 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1023-1149 |
| Cow position: | chr13:19901603-19901729 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1151-1372 |
| Cow position: | chr13:19902269-19902490 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1415-1504 |
| Cow position: | chr13:19903470-19903559 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1498-1863 |
| Cow position: | chr13:19904373-19904738 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 197 |
| Conread position: | 449-900 |
| Cow position: | chr17:39441585-39442041 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 118, 181 |
| Conread position: | 391-731 |
| Cow position: | chr19:37394102-37394439 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 166 |
| Conread position: | 861-1030 |
| Cow position: | chr19:37396469-37396638 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1151-1372 |
| Cow position: | chr19:37398255-37398476 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-707 |
| Cow position: | chr2:64443854-64443540 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 861-1024 |
| Cow position: | chr2:64442161-64441998 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1151-1372 |
| Cow position: | chr2:64441454-64441233 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-1189 |
| Cow position: | chr26:17694492-17695310 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 260 |
| Conread position: | 1217-1345 |
| Cow position: | chr26:17702970-17703098 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1151-1372 |
| Cow position: | chr5:24472518-24472739 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1216-1372 |
| Cow position: | chr5:19881406-19881249 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 1228-1372 |
| Cow position: | chr5:20005569-20005424 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1228-1372 |
| Cow position: | chr5:20374612-20374467 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1233-1372 |
| Cow position: | chr5:19986765-19986626 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1234-1372 |
| Cow position: | chr5:19897594-19897456 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1234-1372 |
| Cow position: | chr5:20227286-20227148 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1235-1372 |
| Cow position: | chr5:19849053-19848916 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1235-1372 |
| Cow position: | chr5:20023192-20023055 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1235-1372 |
| Cow position: | chr5:20191460-20191323 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1235-1372 |
| Cow position: | chr5:20281206-20281069 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-1191 |
| Cow position: | chr8:32205131-32205925 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 224 |
| Conread position: | 424-1189 |
| Cow position: | chr8:32240533-32239759 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 199 |
| Conread position: | 124-346 |
| Cow position: | chr9:12160315-12160538 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 417-943 |
| Cow position: | chr9:12160542-12161059 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 99 |
| Conread position: | 1128-1801 |
| Cow position: | chr9:12162642-12163312 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 10 |