Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010063G08.5 |
| Conread position: | 203-1308 |
| Cow position: | chr1:93219643-93218528 (view UCSC Genome Browser custom track) |
| Alignm length: | 1124 |
| Alignm identity: | 880 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 228 |
| Conread position: | 386-1307 |
| Cow position: | chr1:63254709-63255624 (view UCSC Genome Browser custom track) |
| Alignm length: | 926 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 153-305 |
| Cow position: | chr10:19088092-19087940 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 303-630 |
| Cow position: | chr10:19086812-19086485 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 625-807 |
| Cow position: | chr10:19085777-19085595 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 791-984 |
| Cow position: | chr10:19085483-19085290 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 978-1165 |
| Cow position: | chr10:19084515-19084328 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1164-1309 |
| Cow position: | chr10:19083781-19083636 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 127 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-544 |
| Cow position: | chr11:9335607-9335719 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-789 |
| Cow position: | chr11:9337777-9337937 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 136 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 791-984 |
| Cow position: | chr11:9338702-9338895 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 978-1165 |
| Cow position: | chr11:9340532-9340719 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1164-1310 |
| Cow position: | chr11:9343069-9343215 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-1307 |
| Cow position: | chr16:36112550-36111440 (view UCSC Genome Browser custom track) |
| Alignm length: | 1124 |
| Alignm identity: | 699 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 168 |
| Conread position: | 542-1009 |
| Cow position: | chr19:45155242-45154776 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 441, 0 |
| Conread position: | 891-1249 |
| Cow position: | chr19:26728292-26727945 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 983-1165 |
| Cow position: | chr19:45154694-45154512 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1164-1310 |
| Cow position: | chr19:45154425-45154279 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 131 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 401-1281 |
| Cow position: | chr22:38195947-38195101 (view UCSC Genome Browser custom track) |
| Alignm length: | 885 |
| Alignm identity: | 525 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 277, 295 |
| Conread position: | 230-460 |
| Cow position: | chr24:27075967-27076197 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 211, 36 |
| Conread position: | 302-544 |
| Cow position: | chr25:37061288-37061530 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 542-984 |
| Cow position: | chr25:37061968-37062410 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-153 |
| Cow position: | chr26:5425280-5425128 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-305 |
| Cow position: | chr26:5421831-5421675 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 303-439 |
| Cow position: | chr26:5420326-5420189 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 128 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 432-544 |
| Cow position: | chr26:5417264-5417152 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 542-654 |
| Cow position: | chr26:5414849-5414738 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 608-822 |
| Cow position: | chr26:14057000-14057214 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 132, 150 |
| Conread position: | 629-802 |
| Cow position: | chr26:5414387-5414213 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 788-991 |
| Cow position: | chr26:5412437-5412234 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 983-1165 |
| Cow position: | chr26:5410967-5410785 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1164-1460 |
| Cow position: | chr26:5408175-5407881 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 153 |
| Conread position: | 166-305 |
| Cow position: | chr28:456068-456207 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-630 |
| Cow position: | chr28:456309-456637 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-798 |
| Cow position: | chr28:456739-456908 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 786-984 |
| Cow position: | chr28:456997-457195 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 983-1165 |
| Cow position: | chr28:457289-457471 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1164-1308 |
| Cow position: | chr28:457556-457700 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 130 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-1307 |
| Cow position: | chr3:54413009-54414137 (view UCSC Genome Browser custom track) |
| Alignm length: | 1132 |
| Alignm identity: | 906 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 332-1307 |
| Cow position: | chr7:14383700-14382734 (view UCSC Genome Browser custom track) |
| Alignm length: | 985 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 26 |