Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR010070E04.5
        

               Conread position:
               326-696
               

               Cow position:
               chr1:76781668-76782030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               327-713
               

               Cow position:
               chr1:92045173-92045536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               328-508
               

               Cow position:
               chr1:24751672-24751493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               331-689
               

               Cow position:
               chr1:43589110-43588765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               331-700
               

               Cow position:
               chr1:78201070-78201435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               331-713
               

               Cow position:
               chr1:44097031-44097397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               331-728
               

               Cow position:
               chr1:42060287-42059912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               331-764
               

               Cow position:
               chr1:60891215-60890790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               331-765
               

               Cow position:
               chr1:54485951-54486374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 195
               

               Conread position:
               332-691
               

               Cow position:
               chr1:13565411-13565063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               345-564
               

               Cow position:
               chr1:46345755-46345537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               345-748
               

               Cow position:
               chr1:76457733-76458109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               206, 49
               

               Conread position:
               359-708
               

               Cow position:
               chr1:45880261-45879907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               190, 86
               

               Conread position:
               359-713
               

               Cow position:
               chr1:89096912-89096577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               187, 75
               

               Conread position:
               365-631
               

               Cow position:
               chr1:77954363-77954624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               184, 75
               

               Conread position:
               365-690
               

               Cow position:
               chr1:32959086-32958773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               194, 77
               

               Conread position:
               365-711
               

               Cow position:
               chr1:24931956-24931608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 205
               

               Conread position:
               368-574
               

               Cow position:
               chr1:38335230-38335436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               370-784
               

               Cow position:
               chr1:73688845-73688438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               394-662
               

               Cow position:
               chr1:55167993-55167730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               203, 50
               

               Conread position:
               413-765
               

               Cow position:
               chr1:87736938-87737292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               414-694
               

               Cow position:
               chr1:15266343-15266070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               433-685
               

               Cow position:
               chr1:31660482-31660730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               443-734
               

               Cow position:
               chr1:46883521-46883810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 182
               

               Conread position:
               456-765
               

               Cow position:
               chr1:45181356-45181652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               237, 78
               

               Conread position:
               460-765
               

               Cow position:
               chr1:27311852-27312161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               91, 82
               

               Conread position:
               483-765
               

               Cow position:
               chr1:13696936-13696657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 124
               

               Conread position:
               491-765
               

               Cow position:
               chr1:91032311-91032586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               492-765
               

               Cow position:
               chr1:66599923-66599646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               59, 131
               

               Conread position:
               514-765
               

               Cow position:
               chr1:46633678-46633433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               534-763
               

               Cow position:
               chr1:17622994-17623222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               635-765
               

               Cow position:
               chr1:25699733-25699602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               650-765
               

               Cow position:
               chr1:40257084-40256967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               654-935
               

               Cow position:
               chr1:74009292-74009578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               665-947
               

               Cow position:
               chr1:1515639-1515920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               707-887
               

               Cow position:
               chr1:24750930-24750750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               713-935
               

               Cow position:
               chr1:76783317-76783542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               328-700
               

               Cow position:
               chr10:27967160-27967545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 139
               

               Conread position:
               331-498
               

               Cow position:
               chr10:13219609-13219437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               331-579
               

               Cow position:
               chr10:68351446-68351693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               331-705
               

               Cow position:
               chr10:33962917-33963281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               337-792
               

               Cow position:
               chr10:40448895-40448438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 138
               

               Conread position:
               362-631
               

               Cow position:
               chr10:27376739-27376486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               197, 64
               

               Conread position:
               365-575
               

               Cow position:
               chr10:17441248-17441459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               365-579
               

               Cow position:
               chr10:28021523-28021738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               365-935
               

               Cow position:
               chr10:50723136-50723697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               367
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               194, 77
               

               Conread position:
               370-947
               

               Cow position:
               chr10:48150377-48149817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 9
               

               Conread position:
               384-774
               

               Cow position:
               chr10:26932071-26932453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               389-765
               

               Cow position:
               chr10:27403421-27403067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               390-718
               

               Cow position:
               chr10:31820494-31820803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               159, 43
               

               Conread position:
               397-585
               

               Cow position:
               chr10:7407757-7407941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               428-764
               

               Cow position:
               chr10:40510909-40511249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               432-776
               

               Cow position:
               chr10:40547262-40546927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 126
               

               Conread position:
               434-1009
               

               Cow position:
               chr10:31056984-31057534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 13
               

               Conread position:
               443-942
               

               Cow position:
               chr10:23305157-23304675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               468-764
               

               Cow position:
               chr10:40458276-40457975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               535-765
               

               Cow position:
               chr10:4905666-4905892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               705-919
               

               Cow position:
               chr10:26418340-26418548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               131, 28
               

               Conread position:
               712-955
               

               Cow position:
               chr10:33963519-33963765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 203
               

               Conread position:
               291-765
               

               Cow position:
               chr11:53680423-53679953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 19
               

               Conread position:
               318-776
               

               Cow position:
               chr11:26368609-26368141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               324
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 150
               

               Conread position:
               324-1004
               

               Cow position:
               chr11:21621817-21622491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               691
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               327-499
               

               Cow position:
               chr11:35732573-35732748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               328-579
               

               Cow position:
               chr11:16197353-16197597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               328-761
               

               Cow position:
               chr11:43508696-43509112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               18, 54
               

               Conread position:
               331-759
               

               Cow position:
               chr11:67545296-67545712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 132
               

               Conread position:
               331-765
               

               Cow position:
               chr11:33913192-33912768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               331-776
               

               Cow position:
               chr11:55010514-55010939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               288
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               331-776
               

               Cow position:
               chr11:64888476-64888054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               190, 60
               

               Conread position:
               331-935
               

               Cow position:
               chr11:64125545-64124951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               394
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               331-960
               

               Cow position:
               chr11:39660849-39660234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               365-518
               

               Cow position:
               chr11:32601198-32601050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               365-518
               

               Cow position:
               chr11:40621315-40621164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               365-695
               

               Cow position:
               chr11:13737788-13737476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               365-720
               

               Cow position:
               chr11:37489794-37489447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 63
               

               Conread position:
               366-748
               

               Cow position:
               chr11:86669150-86668778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               367-514
               

               Cow position:
               chr11:41459840-41459987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               368-770
               

               Cow position:
               chr11:82102668-82103050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               177, 54
               

               Conread position:
               389-770
               

               Cow position:
               chr11:48662462-48662821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               144, 37
               

               Conread position:
               433-741
               

               Cow position:
               chr11:21911352-21911657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               483-752
               

               Cow position:
               chr11:68627361-68627634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               30, 144
               

               Conread position:
               501-752
               

               Cow position:
               chr11:5608738-5608991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               531-754
               

               Cow position:
               chr11:43252817-43252592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               536-765
               

               Cow position:
               chr11:66888520-66888300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               539-765
               

               Cow position:
               chr11:916959-916742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               180, 82
               

               Conread position:
               733-1000
               

               Cow position:
               chr11:37486582-37486311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               165, 178
               

               Conread position:
               289-798
               

               Cow position:
               chr12:13024716-13025224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               320-765
               

               Cow position:
               chr12:8640277-8640716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               324-520
               

               Cow position:
               chr12:4497726-4497923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               326-1000
               

               Cow position:
               chr12:15382954-15383584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               685
               

               Alignm identity:
               429
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               328-627
               

               Cow position:
               chr12:23027813-23028107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 115
               

               Conread position:
               331-583
               

               Cow position:
               chr12:24176931-24176684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               143, 21
               

               Conread position:
               331-681
               

               Cow position:
               chr12:40929399-40929733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               331-765
               

               Cow position:
               chr12:5300394-5300811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               345-720
               

               Cow position:
               chr12:30190314-30189947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               367-765
               

               Cow position:
               chr12:3139484-3139100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 40
               

               Conread position:
               414-687
               

               Cow position:
               chr12:13647190-13647459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               132, 14
               

               Conread position:
               414-953
               

               Cow position:
               chr12:12308227-12307700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               432-775
               

               Cow position:
               chr12:39317859-39318203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               435-777
               

               Cow position:
               chr12:37496560-37496892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               491-764
               

               Cow position:
               chr12:38020764-38021040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 133
               

               Conread position:
               511-765
               

               Cow position:
               chr12:30532578-30532827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               40, 111
               

               Conread position:
               303-742
               

               Cow position:
               chr13:19546056-19546481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               320-764
               

               Cow position:
               chr13:56680694-56680267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               325-500
               

               Cow position:
               chr13:646362-646188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               325-691
               

               Cow position:
               chr13:47645795-47645451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               325-710
               

               Cow position:
               chr13:41843543-41843174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 109
               

               Conread position:
               326-776
               

               Cow position:
               chr13:61030662-61031098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 200
               

               Conread position:
               326-929
               

               Cow position:
               chr13:31495158-31494587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               611
               

               Alignm identity:
               389
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               328-758
               

               Cow position:
               chr13:14699576-14699161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               328-801
               

               Cow position:
               chr13:12485058-12484588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 122
               

               Conread position:
               329-520
               

               Cow position:
               chr13:28591840-28592033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 113
               

               Conread position:
               337-549
               

               Cow position:
               chr13:15591194-15591408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               9, 190
               

               Conread position:
               337-766
               

               Cow position:
               chr13:262917-262500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 109
               

               Conread position:
               360-915
               

               Cow position:
               chr13:34348791-34348253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               357
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               68, 85
               

               Conread position:
               364-766
               

               Cow position:
               chr13:38463261-38463643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 69
               

               Conread position:
               365-584
               

               Cow position:
               chr13:28091314-28091531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               186, 67
               

               Conread position:
               365-713
               

               Cow position:
               chr13:30765952-30765621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               194, 77
               

               Conread position:
               372-765
               

               Cow position:
               chr13:60312687-60312302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 115
               

               Conread position:
               399-764
               

               Cow position:
               chr13:35752011-35751656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               423-642
               

               Cow position:
               chr13:54407848-54408071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               428-683
               

               Cow position:
               chr13:12701998-12702249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               459-744
               

               Cow position:
               chr13:2215268-2214985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               476-758
               

               Cow position:
               chr13:11547985-11547704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               484-734
               

               Cow position:
               chr13:44800674-44800425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               491-765
               

               Cow position:
               chr13:2360687-2360417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               501-692
               

               Cow position:
               chr13:7333230-7333417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 118
               

               Conread position:
               536-763
               

               Cow position:
               chr13:51120831-51121063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 87
               

               Conread position:
               326-776
               

               Cow position:
               chr14:37115719-37116149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               327-765
               

               Cow position:
               chr14:7951130-7950690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               331-610
               

               Cow position:
               chr14:48395177-48395445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               360-765
               

               Cow position:
               chr14:28198784-28199169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               364-939
               

               Cow position:
               chr14:49272829-49272270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               369-709
               

               Cow position:
               chr14:121807-121483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               122, 9
               

               Conread position:
               414-761
               

               Cow position:
               chr14:39901832-39901506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               460-765
               

               Cow position:
               chr14:32724320-32724625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               91, 139
               

               Conread position:
               460-766
               

               Cow position:
               chr14:4050422-4050118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               476-798
               

               Cow position:
               chr14:32920947-32920636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               149, 46
               

               Conread position:
               483-765
               

               Cow position:
               chr14:26259256-26258969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               486-710
               

               Cow position:
               chr14:19839884-19839668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               491-704
               

               Cow position:
               chr14:48997333-48997540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               512-762
               

               Cow position:
               chr14:15661519-15661273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 5
               

               Conread position:
               522-765
               

               Cow position:
               chr14:11992431-11992192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               326-776
               

               Cow position:
               chr15:15213876-15214307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               327-765
               

               Cow position:
               chr15:11210114-11210551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               328-935
               

               Cow position:
               chr15:36525391-36524802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               381
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               337-708
               

               Cow position:
               chr15:31942549-31942185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               365-579
               

               Cow position:
               chr15:36107848-36108060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               367-719
               

               Cow position:
               chr15:7880574-7880920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 170
               

               Conread position:
               367-719
               

               Cow position:
               chr15:9012545-9012893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 193
               

               Conread position:
               368-703
               

               Cow position:
               chr15:33701317-33700988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               373-798
               

               Cow position:
               chr15:8453717-8453305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               179, 71
               

               Conread position:
               377-1002
               

               Cow position:
               chr15:31273537-31274146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               416-765
               

               Cow position:
               chr15:6162367-6162707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 157
               

               Conread position:
               428-765
               

               Cow position:
               chr15:43356352-43356013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               433-728
               

               Cow position:
               chr15:42610907-42610617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               434-875
               

               Cow position:
               chr15:2914386-2914815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               445-703
               

               Cow position:
               chr15:45004788-45004546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               445-968
               

               Cow position:
               chr15:2945990-2946501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 23
               

               Conread position:
               454-716
               

               Cow position:
               chr15:44149796-44150045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               457-765
               

               Cow position:
               chr15:12688835-12689122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               491-763
               

               Cow position:
               chr15:29541072-29540803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               496-1037
               

               Cow position:
               chr15:29214163-29213626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               628-759
               

               Cow position:
               chr15:5226544-5226676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               667-919
               

               Cow position:
               chr15:8983238-8982989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               676-825
               

               Cow position:
               chr15:52821886-52822030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               326-1000
               

               Cow position:
               chr16:9252225-9252887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               688
               

               Alignm identity:
               430
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               331-519
               

               Cow position:
               chr16:32174042-32173853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 93
               

               Conread position:
               331-563
               

               Cow position:
               chr16:54011844-54011608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               331-570
               

               Cow position:
               chr16:16332033-16332276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 117
               

               Conread position:
               333-765
               

               Cow position:
               chr16:40009426-40009835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               338-621
               

               Cow position:
               chr16:19711141-19711419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 73
               

               Conread position:
               345-1001
               

               Cow position:
               chr16:45573193-45572553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               678
               

               Alignm identity:
               434
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               358-631
               

               Cow position:
               chr16:27159107-27159374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               362-763
               

               Cow position:
               chr16:12309325-12308943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 60
               

               Conread position:
               364-734
               

               Cow position:
               chr16:17034563-17034199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 13
               

               Conread position:
               365-540
               

               Cow position:
               chr16:56599191-56599365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               147, 77
               

               Conread position:
               365-623
               

               Cow position:
               chr16:51098285-51098535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               146, 79
               

               Conread position:
               365-713
               

               Cow position:
               chr16:52928146-52928483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               181, 63
               

               Conread position:
               369-763
               

               Cow position:
               chr16:12136369-12135961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               389-765
               

               Cow position:
               chr16:6920263-6920633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               410-1003
               

               Cow position:
               chr16:9574696-9575267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               382
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               168, 31
               

               Conread position:
               414-684
               

               Cow position:
               chr16:33657161-33656904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 14
               

               Conread position:
               414-765
               

               Cow position:
               chr16:24024052-24023703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               414-765
               

               Cow position:
               chr16:40523320-40522970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               433-762
               

               Cow position:
               chr16:4550700-4550376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               433-765
               

               Cow position:
               chr16:18054086-18053753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               483-765
               

               Cow position:
               chr16:19898265-19897983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               487-770
               

               Cow position:
               chr16:30800378-30800101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               491-744
               

               Cow position:
               chr16:10670642-10670397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               642-862
               

               Cow position:
               chr16:19711417-19711633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               191, 7
               

               Conread position:
               319-579
               

               Cow position:
               chr17:22519836-22520103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               6, 105
               

               Conread position:
               327-765
               

               Cow position:
               chr17:1262561-1262145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               327-877
               

               Cow position:
               chr17:20318399-20317863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               328-579
               

               Cow position:
               chr17:18888028-18888276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               331-580
               

               Cow position:
               chr17:10049180-10048927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               332-575
               

               Cow position:
               chr17:1230582-1230338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               337-696
               

               Cow position:
               chr17:33244447-33244796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               338-795
               

               Cow position:
               chr17:20194432-20193988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               365-662
               

               Cow position:
               chr17:21605650-21605363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               186, 63
               

               Conread position:
               365-713
               

               Cow position:
               chr17:38875206-38874878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               194, 61
               

               Conread position:
               365-776
               

               Cow position:
               chr17:13381541-13381951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 34
               

               Conread position:
               365-1002
               

               Cow position:
               chr17:14610369-14609751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 85
               

               Conread position:
               369-762
               

               Cow position:
               chr17:11242363-11242740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 42
               

               Conread position:
               389-567
               

               Cow position:
               chr17:1554642-1554465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 55
               

               Conread position:
               392-755
               

               Cow position:
               chr17:13321787-13322146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 162
               

               Conread position:
               414-764
               

               Cow position:
               chr17:24816071-24815730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               414-765
               

               Cow position:
               chr17:1759154-1759498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               427-716
               

               Cow position:
               chr17:42010595-42010875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               428-749
               

               Cow position:
               chr17:16387027-16387331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 197
               

               Conread position:
               471-716
               

               Cow position:
               chr17:20185324-20185093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 95
               

               Conread position:
               488-765
               

               Cow position:
               chr17:22872483-22872225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               514-710
               

               Cow position:
               chr17:36036666-36036858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               667-1017
               

               Cow position:
               chr17:10048621-10048266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 203
               

               Conread position:
               721-868
               

               Cow position:
               chr17:18890544-18890691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               726-954
               

               Cow position:
               chr17:18890762-18890979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               327-559
               

               Cow position:
               chr18:34686221-34685987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 119
               

               Conread position:
               327-567
               

               Cow position:
               chr18:12467738-12467976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 107
               

               Conread position:
               331-540
               

               Cow position:
               chr18:11693885-11694092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               331-752
               

               Cow position:
               chr18:37715131-37714717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               331-776
               

               Cow position:
               chr18:49898911-49899332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               345-938
               

               Cow position:
               chr18:2782934-2783516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               377
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               359-873
               

               Cow position:
               chr18:32971739-32971237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 85
               

               Conread position:
               362-706
               

               Cow position:
               chr18:16634974-16634649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 83
               

               Conread position:
               425-765
               

               Cow position:
               chr18:4731006-4730649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               460-765
               

               Cow position:
               chr18:18425541-18425829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               465-765
               

               Cow position:
               chr18:16062997-16062705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               86, 53
               

               Conread position:
               483-765
               

               Cow position:
               chr18:46451580-46451842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               484-765
               

               Cow position:
               chr18:52737542-52737264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 139
               

               Conread position:
               516-741
               

               Cow position:
               chr18:13716996-13717218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               667-915
               

               Cow position:
               chr18:26874485-26874240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               326-500
               

               Cow position:
               chr19:4477869-4478045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 120
               

               Conread position:
               326-713
               

               Cow position:
               chr19:33517231-33517622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 181
               

               Conread position:
               326-935
               

               Cow position:
               chr19:48839746-48840348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 106
               

               Conread position:
               331-567
               

               Cow position:
               chr19:38994392-38994628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               15, 113
               

               Conread position:
               331-597
               

               Cow position:
               chr19:9535457-9535711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               331-942
               

               Cow position:
               chr19:8282631-8283222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               332-765
               

               Cow position:
               chr19:21109024-21108576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               337-575
               

               Cow position:
               chr19:46626753-46626512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               358-579
               

               Cow position:
               chr19:2602760-2602540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 64
               

               Conread position:
               359-770
               

               Cow position:
               chr19:22688435-22688813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               192, 50
               

               Conread position:
               365-539
               

               Cow position:
               chr19:15944199-15944022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               365-573
               

               Cow position:
               chr19:12790279-12790075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               194, 57
               

               Conread position:
               386-748
               

               Cow position:
               chr19:6487149-6486809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               433-765
               

               Cow position:
               chr19:34206354-34206677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               472-765
               

               Cow position:
               chr19:28468624-28468911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 136
               

               Conread position:
               548-765
               

               Cow position:
               chr19:54161897-54162108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               103, 77
               

               Conread position:
               655-777
               

               Cow position:
               chr19:20437141-20437019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-765
               

               Cow position:
               chr2:10144215-10144688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               317-710
               

               Cow position:
               chr2:49983411-49983787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               326-567
               

               Cow position:
               chr2:15863926-15863684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               326-996
               

               Cow position:
               chr2:6938626-6939272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               681
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               327-584
               

               Cow position:
               chr2:39790108-39790366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               327-765
               

               Cow position:
               chr2:58536761-58536319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 112
               

               Conread position:
               327-776
               

               Cow position:
               chr2:2073259-2072821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               303
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               327-930
               

               Cow position:
               chr2:36856973-36856377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               386
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               328-765
               

               Cow position:
               chr2:63090755-63090335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               280
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 119
               

               Conread position:
               329-784
               

               Cow position:
               chr2:48859176-48859621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               331-583
               

               Cow position:
               chr2:39580510-39580260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               331-621
               

               Cow position:
               chr2:66059135-66059415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               331-730
               

               Cow position:
               chr2:86527559-86527945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               331-758
               

               Cow position:
               chr2:36584841-36584430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 114
               

               Conread position:
               331-999
               

               Cow position:
               chr2:76037984-76037359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               673
               

               Alignm identity:
               422
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               331-1000
               

               Cow position:
               chr2:8737128-8736494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               681
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               331-1001
               

               Cow position:
               chr2:40474236-40473605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               677
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               332-631
               

               Cow position:
               chr2:61464079-61464375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               345-1038
               

               Cow position:
               chr2:44204449-44203794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               705
               

               Alignm identity:
               442
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               204, 76
               

               Conread position:
               360-991
               

               Cow position:
               chr2:76047950-76048538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               402
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               198, 88
               

               Conread position:
               365-715
               

               Cow position:
               chr2:45308540-45308870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               365-757
               

               Cow position:
               chr2:37571710-37571321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 144
               

               Conread position:
               365-960
               

               Cow position:
               chr2:65780880-65780320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               382
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               368-535
               

               Cow position:
               chr2:14956891-14957060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               134, 77
               

               Conread position:
               368-713
               

               Cow position:
               chr2:3715070-3714721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               377-776
               

               Cow position:
               chr2:23608131-23607752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               172, 68
               

               Conread position:
               394-609
               

               Cow position:
               chr2:41060938-41061150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 74
               

               Conread position:
               395-776
               

               Cow position:
               chr2:74897396-74897024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               156, 47
               

               Conread position:
               414-765
               

               Cow position:
               chr2:41124540-41124875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               416-765
               

               Cow position:
               chr2:44079023-44078695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               433-765
               

               Cow position:
               chr2:78809430-78809767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               451-707
               

               Cow position:
               chr2:38177949-38177693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               100, 95
               

               Conread position:
               453-998
               

               Cow position:
               chr2:33204408-33204940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               483-765
               

               Cow position:
               chr2:58971027-58971307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               483-997
               

               Cow position:
               chr2:61681083-61680599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               605-765
               

               Cow position:
               chr2:66059534-66059690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               625-764
               

               Cow position:
               chr2:41061148-41061289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               635-765
               

               Cow position:
               chr2:46279498-46279369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               654-877
               

               Cow position:
               chr2:69309012-69309235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               124, 57
               

               Conread position:
               654-904
               

               Cow position:
               chr2:17370060-17370308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               105, 190
               

               Conread position:
               702-1008
               

               Cow position:
               chr2:8513982-8514272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               267, 117
               

               Conread position:
               780-967
               

               Cow position:
               chr2:73112568-73112381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               52, 179
               

               Conread position:
               802-1000
               

               Cow position:
               chr2:48859573-48859773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               300-621
               

               Cow position:
               chr20:3877017-3876691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               325-1002
               

               Cow position:
               chr20:17306267-17306907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               690
               

               Alignm identity:
               446
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               326-580
               

               Cow position:
               chr20:6328889-6329151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               327-753
               

               Cow position:
               chr20:41020702-41020300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               224, 86
               

               Conread position:
               332-619
               

               Cow position:
               chr20:16681352-16681627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               365-709
               

               Cow position:
               chr20:27652073-27651746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               390-523
               

               Cow position:
               chr20:36716155-36716286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               428-765
               

               Cow position:
               chr20:20339129-20338788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 195
               

               Conread position:
               458-923
               

               Cow position:
               chr20:28749955-28750407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               479-765
               

               Cow position:
               chr20:38428725-38429009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               512-1014
               

               Cow position:
               chr20:36716529-36717046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               316-575
               

               Cow position:
               chr21:3790255-3789997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               322-765
               

               Cow position:
               chr21:38004370-38003946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               326-584
               

               Cow position:
               chr21:13391121-13391383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               328-765
               

               Cow position:
               chr21:29202053-29202493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               307
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 24
               

               Conread position:
               329-539
               

               Cow position:
               chr21:20541567-20541768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               331-749
               

               Cow position:
               chr21:46770782-46770367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 244
               

               Conread position:
               331-770
               

               Cow position:
               chr21:26575663-26576081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 113
               

               Conread position:
               345-765
               

               Cow position:
               chr21:48533489-48533082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 76
               

               Conread position:
               356-579
               

               Cow position:
               chr21:2854929-2854709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               203, 8
               

               Conread position:
               378-575
               

               Cow position:
               chr21:4510421-4510227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 44
               

               Conread position:
               468-740
               

               Cow position:
               chr21:41692182-41691914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               493-765
               

               Cow position:
               chr21:47430907-47431181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               58, 130
               

               Conread position:
               558-765
               

               Cow position:
               chr21:20541765-20541962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               306-776
               

               Cow position:
               chr22:43969153-43969599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               328-750
               

               Cow position:
               chr22:18912186-18912614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 242
               

               Conread position:
               331-537
               

               Cow position:
               chr22:5459831-5459625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               331-833
               

               Cow position:
               chr22:22495774-22495281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               365-684
               

               Cow position:
               chr22:31687926-31687616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               365-765
               

               Cow position:
               chr22:8844098-8843716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 79
               

               Conread position:
               365-951
               

               Cow position:
               chr22:28980888-28980297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 267
               

               Conread position:
               367-1000
               

               Cow position:
               chr22:46554438-46555043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 58
               

               Conread position:
               369-776
               

               Cow position:
               chr22:6193703-6193319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               182, 76
               

               Conread position:
               371-765
               

               Cow position:
               chr22:11403734-11404133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 261
               

               Conread position:
               396-582
               

               Cow position:
               chr22:14261694-14261507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               466-765
               

               Cow position:
               chr22:29846772-29846472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               737-998
               

               Cow position:
               chr22:15597036-15597282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               327-765
               

               Cow position:
               chr23:32686611-32686190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               328-596
               

               Cow position:
               chr23:4521154-4520883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               331-503
               

               Cow position:
               chr23:22714516-22714346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 104
               

               Conread position:
               331-800
               

               Cow position:
               chr23:5914827-5914370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               16, 113
               

               Conread position:
               339-520
               

               Cow position:
               chr23:22696042-22696225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               346-678
               

               Cow position:
               chr23:29429477-29429153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               205, 119
               

               Conread position:
               365-686
               

               Cow position:
               chr23:41256685-41257016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 169
               

               Conread position:
               365-910
               

               Cow position:
               chr23:8578882-8579424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 12
               

               Conread position:
               365-939
               

               Cow position:
               chr23:20076159-20076706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 20
               

               Conread position:
               393-770
               

               Cow position:
               chr23:4352832-4353188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               428-753
               

               Cow position:
               chr23:37021521-37021201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               448-621
               

               Cow position:
               chr23:352251-352080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 91
               

               Conread position:
               472-740
               

               Cow position:
               chr23:21487580-21487835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               483-765
               

               Cow position:
               chr23:19851708-19851985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               487-738
               

               Cow position:
               chr23:22714227-22713980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 102
               

               Conread position:
               488-758
               

               Cow position:
               chr23:8731070-8731342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               491-735
               

               Cow position:
               chr23:14510869-14510628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               60, 132
               

               Conread position:
               500-764
               

               Cow position:
               chr23:18384938-18385211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               602-752
               

               Cow position:
               chr23:22696236-22696381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               705-888
               

               Cow position:
               chr23:22725871-22725681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               328-574
               

               Cow position:
               chr24:27460797-27461042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               223, 20
               

               Conread position:
               330-708
               

               Cow position:
               chr24:7775146-7775509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               331-567
               

               Cow position:
               chr24:27592104-27592340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               332-956
               

               Cow position:
               chr24:28808466-28807868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               336-753
               

               Cow position:
               chr24:42936577-42936988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 179
               

               Conread position:
               356-1001
               

               Cow position:
               chr24:18408958-18409622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               676
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 89
               

               Conread position:
               365-731
               

               Cow position:
               chr24:24264518-24264877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 181
               

               Conread position:
               365-761
               

               Cow position:
               chr24:26964054-26964430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               186, 57
               

               Conread position:
               491-736
               

               Cow position:
               chr24:42280370-42280609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               493-765
               

               Cow position:
               chr24:10155877-10156144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               515-752
               

               Cow position:
               chr24:18220876-18221109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               328-562
               

               Cow position:
               chr25:36157894-36157656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               328-693
               

               Cow position:
               chr25:17630370-17630722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               330-570
               

               Cow position:
               chr25:15661939-15662180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               331-565
               

               Cow position:
               chr25:2501517-2501282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 118
               

               Conread position:
               331-568
               

               Cow position:
               chr25:11486824-11487063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               331-580
               

               Cow position:
               chr25:40632468-40632227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               331-765
               

               Cow position:
               chr25:13847169-13847606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               331-765
               

               Cow position:
               chr25:16143888-16144330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               331-765
               

               Cow position:
               chr25:31537044-31537484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               331-798
               

               Cow position:
               chr25:12409418-12408959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               15, 125
               

               Conread position:
               332-764
               

               Cow position:
               chr25:21158091-21157659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               365-508
               

               Cow position:
               chr25:12142786-12142646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               365-508
               

               Cow position:
               chr25:23205654-23205512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               365-1000
               

               Cow position:
               chr25:8547742-8547110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               366-579
               

               Cow position:
               chr25:18563638-18563422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               99, 152
               

               Conread position:
               366-776
               

               Cow position:
               chr25:16116856-16117249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               183, 25
               

               Conread position:
               389-596
               

               Cow position:
               chr25:11408750-11408956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               429-620
               

               Cow position:
               chr25:13733764-13733951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               429-765
               

               Cow position:
               chr25:7511606-7511937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               483-684
               

               Cow position:
               chr25:15447016-15447214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 143
               

               Conread position:
               491-752
               

               Cow position:
               chr25:15478302-15478564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               491-753
               

               Cow position:
               chr25:12090080-12089832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               492-765
               

               Cow position:
               chr25:14939380-14939653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               577-765
               

               Cow position:
               chr25:13250335-13250522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               142, 48
               

               Conread position:
               656-765
               

               Cow position:
               chr25:13734119-13734229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               291-600
               

               Cow position:
               chr26:12266405-12266097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               331-589
               

               Cow position:
               chr26:28386522-28386272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               362-710
               

               Cow position:
               chr26:20855151-20854805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 258
               

               Conread position:
               368-716
               

               Cow position:
               chr26:12188662-12188337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               191, 19
               

               Conread position:
               452-690
               

               Cow position:
               chr26:35430537-35430312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               459-765
               

               Cow position:
               chr26:24996658-24996349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               483-757
               

               Cow position:
               chr26:1330204-1329932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               68, 140
               

               Conread position:
               485-784
               

               Cow position:
               chr26:34095428-34095139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               527-765
               

               Cow position:
               chr26:8900386-8900625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               744-1001
               

               Cow position:
               chr26:35428960-35428692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               317-579
               

               Cow position:
               chr27:15408882-15408617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               323-586
               

               Cow position:
               chr27:26465954-26465700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               345-541
               

               Cow position:
               chr27:26513657-26513457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               364-948
               

               Cow position:
               chr27:15218528-15217986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 81
               

               Conread position:
               365-521
               

               Cow position:
               chr27:24909003-24908849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               365-735
               

               Cow position:
               chr27:27286020-27285670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 12
               

               Conread position:
               365-943
               

               Cow position:
               chr27:22630202-22629665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               382
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               184, 82
               

               Conread position:
               366-579
               

               Cow position:
               chr27:22277584-22277376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               161, 62
               

               Conread position:
               369-1007
               

               Cow position:
               chr27:24965090-24964477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 65
               

               Conread position:
               414-749
               

               Cow position:
               chr27:8711740-8711405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               449-981
               

               Cow position:
               chr27:26448075-26448599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               479-765
               

               Cow position:
               chr27:21160647-21160378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 103
               

               Conread position:
               565-765
               

               Cow position:
               chr27:26635219-26635415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               325-567
               

               Cow position:
               chr28:29952591-29952834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               326-765
               

               Cow position:
               chr28:8124466-8124036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               328-544
               

               Cow position:
               chr28:5709080-5709297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               328-713
               

               Cow position:
               chr28:11209277-11209656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               331-591
               

               Cow position:
               chr28:742747-742999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 81
               

               Conread position:
               331-613
               

               Cow position:
               chr28:23605868-23605585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               331-631
               

               Cow position:
               chr28:22833444-22833738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               360-947
               

               Cow position:
               chr28:5137704-5138276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               416, 164
               

               Conread position:
               365-709
               

               Cow position:
               chr28:13773523-13773196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               365-765
               

               Cow position:
               chr28:12082978-12082577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 195
               

               Conread position:
               370-774
               

               Cow position:
               chr28:23011005-23011405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               189, 7
               

               Conread position:
               443-765
               

               Cow position:
               chr28:16050858-16050524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               458-765
               

               Cow position:
               chr28:6116964-6116664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               502-773
               

               Cow position:
               chr28:20155673-20155408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               700-1002
               

               Cow position:
               chr28:743016-743328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 197
               

               Conread position:
               324-507
               

               Cow position:
               chr29:886613-886800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 125
               

               Conread position:
               326-544
               

               Cow position:
               chr29:12044423-12044640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 153
               

               Conread position:
               328-944
               

               Cow position:
               chr29:42498562-42499161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               337-709
               

               Cow position:
               chr29:7118907-7119253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               345-743
               

               Cow position:
               chr29:4766910-4766521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 96
               

               Conread position:
               372-690
               

               Cow position:
               chr29:20608430-20608746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               389-692
               

               Cow position:
               chr29:9409727-9409443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               169, 47
               

               Conread position:
               397-934
               

               Cow position:
               chr29:16754979-16754457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               414-667
               

               Cow position:
               chr29:6513002-6512754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               459-752
               

               Cow position:
               chr29:29457604-29457304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               486-765
               

               Cow position:
               chr29:6694797-6694514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               38, 124
               

               Conread position:
               572-759
               

               Cow position:
               chr29:27104098-27104281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               147, 54
               

               Conread position:
               654-802
               

               Cow position:
               chr29:1939621-1939769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               305-567
               

               Cow position:
               chr3:29496956-29497220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               321-574
               

               Cow position:
               chr3:75117548-75117798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               326-761
               

               Cow position:
               chr3:548643-548227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               326-776
               

               Cow position:
               chr3:81527032-81527473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               327-523
               

               Cow position:
               chr3:60536076-60535876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               327-972
               

               Cow position:
               chr3:51415212-51414606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               425
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 111
               

               Conread position:
               328-500
               

               Cow position:
               chr3:14767858-14767684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               329-715
               

               Cow position:
               chr3:28717248-28716866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               329-759
               

               Cow position:
               chr3:19227811-19227385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               329-765
               

               Cow position:
               chr3:13508808-13508371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               330-567
               

               Cow position:
               chr3:6887069-6887309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 114
               

               Conread position:
               330-1000
               

               Cow position:
               chr3:32197859-32198516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               676
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 104
               

               Conread position:
               331-492
               

               Cow position:
               chr3:41407632-41407795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               331-696
               

               Cow position:
               chr3:43621077-43620721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               331-696
               

               Cow position:
               chr3:73427669-73427320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               331-739
               

               Cow position:
               chr3:26803004-26803414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               331-749
               

               Cow position:
               chr3:83998751-83998345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               331-755
               

               Cow position:
               chr3:48516919-48517342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               331-770
               

               Cow position:
               chr3:74407087-74406654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               331-935
               

               Cow position:
               chr3:69809964-69810550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               381
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               331-969
               

               Cow position:
               chr3:553022-552385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 182
               

               Conread position:
               332-776
               

               Cow position:
               chr3:54564008-54563588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               337-579
               

               Cow position:
               chr3:9188448-9188204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 112
               

               Conread position:
               337-588
               

               Cow position:
               chr3:6534665-6534412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               337-767
               

               Cow position:
               chr3:62740445-62740032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 111
               

               Conread position:
               365-762
               

               Cow position:
               chr3:84871770-84872148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               376-749
               

               Cow position:
               chr3:59298678-59298331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               343, 97
               

               Conread position:
               390-701
               

               Cow position:
               chr3:29309117-29309413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               404-828
               

               Cow position:
               chr3:11134691-11135097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               405-765
               

               Cow position:
               chr3:34233135-34233473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               146, 38
               

               Conread position:
               414-750
               

               Cow position:
               chr3:79197563-79197911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               426-776
               

               Cow position:
               chr3:60492517-60492187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               123, 21
               

               Conread position:
               428-737
               

               Cow position:
               chr3:3253233-3253547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               428-838
               

               Cow position:
               chr3:2810581-2810980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               429-757
               

               Cow position:
               chr3:19958031-19958350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               483-763
               

               Cow position:
               chr3:30961235-30960948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               485-998
               

               Cow position:
               chr3:14767496-14766969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               502-695
               

               Cow position:
               chr3:27887917-27888107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               517-734
               

               Cow position:
               chr3:52853613-52853828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               598-766
               

               Cow position:
               chr3:39204529-39204691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               604-738
               

               Cow position:
               chr3:75117795-75117925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               606-765
               

               Cow position:
               chr3:29308715-29308873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               654-1000
               

               Cow position:
               chr3:11196480-11196832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               181, 93
               

               Conread position:
               306-765
               

               Cow position:
               chr4:17640106-17640551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               325-957
               

               Cow position:
               chr4:43404117-43404705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               415
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               326-765
               

               Cow position:
               chr4:43705675-43705243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               330-753
               

               Cow position:
               chr4:23686802-23686379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 225
               

               Conread position:
               331-579
               

               Cow position:
               chr4:68407498-68407251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               331-764
               

               Cow position:
               chr4:34914151-34914582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               331-765
               

               Cow position:
               chr4:63540829-63541258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               345-579
               

               Cow position:
               chr4:11011540-11011775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               138, 100
               

               Conread position:
               365-680
               

               Cow position:
               chr4:26692268-26692575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               365-765
               

               Cow position:
               chr4:35583751-35583374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               407-771
               

               Cow position:
               chr4:32300650-32301008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 72
               

               Conread position:
               414-749
               

               Cow position:
               chr4:44131629-44131968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               414-765
               

               Cow position:
               chr4:7175838-7176185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               414-1003
               

               Cow position:
               chr4:13391299-13390715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               427-755
               

               Cow position:
               chr4:45940412-45940735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 7
               

               Conread position:
               434-875
               

               Cow position:
               chr4:64163456-64163017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               445-765
               

               Cow position:
               chr4:566009-566340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               458-765
               

               Cow position:
               chr4:20329023-20328725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               93, 104
               

               Conread position:
               479-718
               

               Cow position:
               chr4:34270190-34269954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               483-1015
               

               Cow position:
               chr4:37647351-37647865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               536-1002
               

               Cow position:
               chr4:66013611-66014069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               561-758
               

               Cow position:
               chr4:205774-205582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               160, 59
               

               Conread position:
               628-758
               

               Cow position:
               chr4:23086511-23086638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               743-947
               

               Cow position:
               chr4:23686168-23685964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               743-1006
               

               Cow position:
               chr4:27765907-27765642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               317-741
               

               Cow position:
               chr5:50583149-50583572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               326-584
               

               Cow position:
               chr5:56623416-56623674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               327-798
               

               Cow position:
               chr5:36670380-36669922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               317
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               331-584
               

               Cow position:
               chr5:72590857-72590604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               15, 93
               

               Conread position:
               331-750
               

               Cow position:
               chr5:63407830-63408228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               331-765
               

               Cow position:
               chr5:3578876-3578441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 154
               

               Conread position:
               331-765
               

               Cow position:
               chr5:29572186-29571754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 268
               

               Conread position:
               331-765
               

               Cow position:
               chr5:31569951-31569518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               331-776
               

               Cow position:
               chr5:48478949-48478529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               301
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               337-765
               

               Cow position:
               chr5:73572845-73572424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               345-765
               

               Cow position:
               chr5:52002808-52003217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 188
               

               Conread position:
               350-936
               

               Cow position:
               chr5:9501325-9501892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 25
               

               Conread position:
               365-762
               

               Cow position:
               chr5:44877801-44878187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 47
               

               Conread position:
               366-713
               

               Cow position:
               chr5:42714493-42714172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               366-765
               

               Cow position:
               chr5:63141979-63142366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 67
               

               Conread position:
               376-719
               

               Cow position:
               chr5:63307958-63308293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               386-765
               

               Cow position:
               chr5:57485023-57484659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 40
               

               Conread position:
               399-777
               

               Cow position:
               chr5:44134827-44134464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               150, 49
               

               Conread position:
               405-765
               

               Cow position:
               chr5:48135046-48135404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               427-750
               

               Cow position:
               chr5:55715490-55715167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               428-755
               

               Cow position:
               chr5:30643728-30643404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               428-776
               

               Cow position:
               chr5:48284053-48284401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               123, 13
               

               Conread position:
               433-684
               

               Cow position:
               chr5:32043278-32043521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               126, 17
               

               Conread position:
               436-765
               

               Cow position:
               chr5:51171680-51172006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               444-770
               

               Cow position:
               chr5:17848272-17848600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               89, 78
               

               Conread position:
               459-734
               

               Cow position:
               chr5:62026435-62026158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               327-579
               

               Cow position:
               chr6:35118878-35118629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               327-798
               

               Cow position:
               chr6:25810562-25810094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 271
               

               Conread position:
               328-620
               

               Cow position:
               chr6:29334206-29334501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               331-567
               

               Cow position:
               chr6:27998595-27998833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               331-1006
               

               Cow position:
               chr6:3945709-3945015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               703
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 204
               

               Conread position:
               332-701
               

               Cow position:
               chr6:57341870-57341513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               337-620
               

               Cow position:
               chr6:432426-432707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               338-713
               

               Cow position:
               chr6:43633336-43633693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               365-695
               

               Cow position:
               chr6:6811928-6812244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               185, 48
               

               Conread position:
               365-764
               

               Cow position:
               chr6:19443831-19443456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 15
               

               Conread position:
               365-771
               

               Cow position:
               chr6:34023789-34023398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 77
               

               Conread position:
               365-1000
               

               Cow position:
               chr6:6380337-6379724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               652
               

               Alignm identity:
               403
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               368-776
               

               Cow position:
               chr6:24303863-24304254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               191, 79
               

               Conread position:
               373-730
               

               Cow position:
               chr6:57964857-57965211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               105, 55
               

               Conread position:
               387-762
               

               Cow position:
               chr6:67728-68098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               429-761
               

               Cow position:
               chr6:42930151-42929837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               446-1021
               

               Cow position:
               chr6:3900039-3899482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 6
               

               Conread position:
               448-765
               

               Cow position:
               chr6:766030-766336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               103, 35
               

               Conread position:
               459-763
               

               Cow position:
               chr6:44611160-44610846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               481-776
               

               Cow position:
               chr6:42988728-42989012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               583-765
               

               Cow position:
               chr6:16610163-16609983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               593-765
               

               Cow position:
               chr6:16639430-16639262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               701-919
               

               Cow position:
               chr6:35548671-35548456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               316-776
               

               Cow position:
               chr7:38094473-38094911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               310
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               323-579
               

               Cow position:
               chr7:40708833-40708573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               326-770
               

               Cow position:
               chr7:49211999-49211576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               300
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               327-579
               

               Cow position:
               chr7:28895202-28894952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               328-699
               

               Cow position:
               chr7:6008333-6008698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               328-734
               

               Cow position:
               chr7:55696890-55697274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               277
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               337-561
               

               Cow position:
               chr7:11430950-11431175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               338-770
               

               Cow position:
               chr7:2269991-2270406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 109
               

               Conread position:
               345-776
               

               Cow position:
               chr7:14869036-14869448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 104
               

               Conread position:
               365-703
               

               Cow position:
               chr7:5117515-5117859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 165
               

               Conread position:
               365-713
               

               Cow position:
               chr7:45598072-45598416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               149, 219
               

               Conread position:
               366-875
               

               Cow position:
               chr7:19188259-19188751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               368-586
               

               Cow position:
               chr7:4722296-4722514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               373-619
               

               Cow position:
               chr7:10387661-10387425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               414-548
               

               Cow position:
               chr7:23924355-23924221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               433-765
               

               Cow position:
               chr7:33890945-33891263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               459-765
               

               Cow position:
               chr7:52268707-52268392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 168
               

               Conread position:
               588-839
               

               Cow position:
               chr7:23924218-23923958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               315-713
               

               Cow position:
               chr8:9804819-9804437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               320-765
               

               Cow position:
               chr8:47184290-47184724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 261
               

               Conread position:
               326-762
               

               Cow position:
               chr8:57532737-57533168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               328-765
               

               Cow position:
               chr8:44481235-44481685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 118
               

               Conread position:
               328-961
               

               Cow position:
               chr8:50703315-50702689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 63
               

               Conread position:
               331-514
               

               Cow position:
               chr8:61147724-61147539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               360-765
               

               Cow position:
               chr8:7853615-7854018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 123
               

               Conread position:
               365-568
               

               Cow position:
               chr8:34294263-34294065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               184, 80
               

               Conread position:
               365-590
               

               Cow position:
               chr8:9076311-9076526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               365-612
               

               Cow position:
               chr8:6392771-6393016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               365-739
               

               Cow position:
               chr8:44478825-44479177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               194, 57
               

               Conread position:
               365-749
               

               Cow position:
               chr8:8725333-8725700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               365-765
               

               Cow position:
               chr8:39003831-39004219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 37
               

               Conread position:
               368-850
               

               Cow position:
               chr8:49686497-49686965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 58
               

               Conread position:
               459-765
               

               Cow position:
               chr8:34790025-34790331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               488-957
               

               Cow position:
               chr8:53110440-53109979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 136
               

               Conread position:
               491-765
               

               Cow position:
               chr8:21007243-21007517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 135
               

               Conread position:
               544-765
               

               Cow position:
               chr8:5647722-5647939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               311-930
               

               Cow position:
               chr9:51768142-51767530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               417
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               326-776
               

               Cow position:
               chr9:6269047-6269490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               303
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               327-953
               

               Cow position:
               chr9:30110882-30111463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               397
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               328-583
               

               Cow position:
               chr9:11424916-11425171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               328-752
               

               Cow position:
               chr9:1870445-1870859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 21
               

               Conread position:
               329-776
               

               Cow position:
               chr9:53332363-53332789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               295
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               331-710
               

               Cow position:
               chr9:48070631-48070248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               337-584
               

               Cow position:
               chr9:61140167-61139921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               337-953
               

               Cow position:
               chr9:41006022-41005428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 71
               

               Conread position:
               345-749
               

               Cow position:
               chr9:3380451-3380846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               355-567
               

               Cow position:
               chr9:7148363-7148152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               196, 89
               

               Conread position:
               358-567
               

               Cow position:
               chr9:17938129-17938335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               188, 45
               

               Conread position:
               365-770
               

               Cow position:
               chr9:31545335-31544938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 119
               

               Conread position:
               365-776
               

               Cow position:
               chr9:61446109-61445717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               369-763
               

               Cow position:
               chr9:20455458-20455085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 55
               

               Conread position:
               425-662
               

               Cow position:
               chr9:36679807-36680035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 22
               

               Conread position:
               426-755
               

               Cow position:
               chr9:38683643-38683968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               432-764
               

               Cow position:
               chr9:51888472-51888792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 8
               

               Conread position:
               555-763
               

               Cow position:
               chr9:55158499-55158298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               134, 52
               

               Conread position:
               654-801
               

               Cow position:
               chr9:34068304-34068155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               301-696
               

               Cow position:
               chrX:37125421-37125035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               323-741
               

               Cow position:
               chrX:21245706-21246122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 304
               

               Conread position:
               327-686
               

               Cow position:
               chrX:40312572-40312213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 121
               

               Conread position:
               328-567
               

               Cow position:
               chrX:18080783-18080543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               328-1000
               

               Cow position:
               chrX:15370474-15371116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               684
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               329-765
               

               Cow position:
               chrX:46566987-46566560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               331-621
               

               Cow position:
               chrX:43713501-43713794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               331-765
               

               Cow position:
               chrX:3203103-3202671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               331-776
               

               Cow position:
               chrX:28859349-28858927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               359-923
               

               Cow position:
               chrX:38535453-38534921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               357
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               189, 66
               

               Conread position:
               366-505
               

               Cow position:
               chrX:19047054-19047191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               459-682
               

               Cow position:
               chrX:29426969-29427184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               65, 104
               

               Conread position:
               466-967
               

               Cow position:
               chrX:11469867-11470355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 28
               

               Conread position:
               475-736
               

               Cow position:
               chrX:43321109-43321368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               76, 131
               

               Conread position:
               481-765
               

               Cow position:
               chrX:38072437-38072718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               70, 143
               

               Conread position:
               612-765
               

               Cow position:
               chrX:12262484-12262640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               667-919
               

               Cow position:
               chrX:18080476-18080230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               694-955
               

               Cow position:
               chrX:37124649-37124389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               140, 101
Conread position:	326-696
Cow position:	chr1:76781668-76782030 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	247
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	20, 54
Conread position:	327-713
Cow position:	chr1:92045173-92045536 (view UCSC Genome Browser custom track)
Alignm length:	390
Alignm identity:	264
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	19, 103
Conread position:	328-508
Cow position:	chr1:24751672-24751493 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	133
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	21, 80
Conread position:	331-689
Cow position:	chr1:43589110-43588765 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	239
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	15, 116
Conread position:	331-700
Cow position:	chr1:78201070-78201435 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	265
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 29
Conread position:	331-713
Cow position:	chr1:44097031-44097397 (view UCSC Genome Browser custom track)
Alignm length:	390
Alignm identity:	257
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	15, 37
Conread position:	331-728
Cow position:	chr1:42060287-42059912 (view UCSC Genome Browser custom track)
Alignm length:	402
Alignm identity:	259
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	16, 71
Conread position:	331-764
Cow position:	chr1:60891215-60890790 (view UCSC Genome Browser custom track)
Alignm length:	437
Alignm identity:	311
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 97
Conread position:	331-765
Cow position:	chr1:54485951-54486374 (view UCSC Genome Browser custom track)
Alignm length:	441
Alignm identity:	319
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 195
Conread position:	332-691
Cow position:	chr1:13565411-13565063 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	257
Alignm E-value:	0
Alignm gaps (pig, cow):	14, 125
Conread position:	345-564
Cow position:	chr1:46345755-46345537 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	162
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	12, 100
Conread position:	345-748
Cow position:	chr1:76457733-76458109 (view UCSC Genome Browser custom track)
Alignm length:	406
Alignm identity:	276
Alignm E-value:	8e-40
Alignm gaps (pig, cow):	206, 49
Conread position:	359-708
Cow position:	chr1:45880261-45879907 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	242
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	190, 86
Conread position:	359-713
Cow position:	chr1:89096912-89096577 (view UCSC Genome Browser custom track)
Alignm length:	356
Alignm identity:	233
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	187, 75
Conread position:	365-631
Cow position:	chr1:77954363-77954624 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	178
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	184, 75
Conread position:	365-690
Cow position:	chr1:32959086-32958773 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	224
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	194, 77
Conread position:	365-711
Cow position:	chr1:24931956-24931608 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	235
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	61, 205
Conread position:	368-574
Cow position:	chr1:38335230-38335436 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	150
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	98, 60
Conread position:	370-784
Cow position:	chr1:73688845-73688438 (view UCSC Genome Browser custom track)
Alignm length:	425
Alignm identity:	270
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	73, 21
Conread position:	394-662
Cow position:	chr1:55167993-55167730 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	195
Alignm E-value:	7e-38
Alignm gaps (pig, cow):	203, 50