Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01B110084.5 |
| Conread position: | 69-825 |
| Cow position: | chr10:46593792-46593038 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 594 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 450 |
| Conread position: | 374-828 |
| Cow position: | chr11:85446426-85445972 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 179, 163 |
| Conread position: | 367-828 |
| Cow position: | chr13:37744719-37744255 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 208 |
| Conread position: | 476-828 |
| Cow position: | chr16:19694549-19694878 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 76-306 |
| Cow position: | chr17:45720976-45721205 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 76-306 |
| Cow position: | chr17:45743201-45742972 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 299-449 |
| Cow position: | chr17:45721677-45721827 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 127 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 353-449 |
| Cow position: | chr17:45756634-45756538 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-821 |
| Cow position: | chr17:45756454-45756078 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-828 |
| Cow position: | chr17:45721911-45722294 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 349-762 |
| Cow position: | chr18:15605527-15605940 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 193, 188 |
| Conread position: | 76-304 |
| Cow position: | chr2:65193177-65192949 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-326 |
| Cow position: | chr2:65209447-65209698 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 299-449 |
| Cow position: | chr2:65192641-65192491 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-449 |
| Cow position: | chr2:65209977-65210127 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 141 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-828 |
| Cow position: | chr2:65210868-65211248 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 450-587 |
| Cow position: | chr2:65192246-65192109 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 125 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-828 |
| Cow position: | chr21:17711514-17712239 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-828 |
| Cow position: | chr23:20802293-20801812 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 195, 190 |
| Conread position: | 367-828 |
| Cow position: | chr23:31822135-31821673 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 242, 246 |
| Conread position: | 367-828 |
| Cow position: | chr23:31857993-31857532 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 242, 246 |
| Conread position: | 368-758 |
| Cow position: | chr24:29219720-29219330 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 174, 169 |
| Conread position: | 74-732 |
| Cow position: | chr5:17899875-17899217 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-304 |
| Cow position: | chr5:22167233-22167005 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-304 |
| Cow position: | chr5:22179216-22178988 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-304 |
| Cow position: | chr5:22299571-22299799 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-304 |
| Cow position: | chr5:22341745-22341973 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-304 |
| Cow position: | chr5:67437375-67437147 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 125, 98 |
| Conread position: | 299-449 |
| Cow position: | chr5:22166868-22166718 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 130 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-449 |
| Cow position: | chr5:22178851-22178701 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 130 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-449 |
| Cow position: | chr5:22299937-22300087 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-449 |
| Cow position: | chr5:22342111-22342261 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-449 |
| Cow position: | chr5:24450359-24450509 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 130 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-449 |
| Cow position: | chr5:67435682-67435532 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-828 |
| Cow position: | chr5:22164638-22164258 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-828 |
| Cow position: | chr5:22342622-22343002 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-828 |
| Cow position: | chr5:24452592-24452972 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-828 |
| Cow position: | chr5:67434072-67433702 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-825 |
| Cow position: | chr7:292996-292258 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 368-828 |
| Cow position: | chr7:13895723-13896183 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 174, 169 |