Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01D090087.5 |
| Conread position: | 1366-2161 |
| Cow position: | chr1:17927526-17926730 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 109 |
| Conread position: | 2784-3205 |
| Cow position: | chr1:17926151-17925716 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 146 |
| Conread position: | 1-2338 |
| Cow position: | chr14:15211565-15209243 (view UCSC Genome Browser custom track) |
| Alignm length: | 2341 |
| Alignm identity: | 1979 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1711, 567 |
| Conread position: | 2351-3010 |
| Cow position: | chr14:15208853-15208219 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 60 |
| Conread position: | 1460-2654 |
| Cow position: | chr17:31090355-31091489 (view UCSC Genome Browser custom track) |
| Alignm length: | 1209 |
| Alignm identity: | 830 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 247 |
| Conread position: | 2752-2927 |
| Cow position: | chr17:31091545-31091719 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 159, 32 |
| Conread position: | 2876-3179 |
| Cow position: | chr2:21651343-21651630 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 2248-2971 |
| Cow position: | chr5:5689730-5689027 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 19 |
| Conread position: | 1-79 |
| Cow position: | chr7:15731746-15731668 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 72 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-1702 |
| Cow position: | chr7:6444150-6442450 (view UCSC Genome Browser custom track) |
| Alignm length: | 1702 |
| Alignm identity: | 1516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1144, 0 |
| Conread position: | 55-291 |
| Cow position: | chr7:15730665-15730431 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 291-474 |
| Cow position: | chr7:15729593-15729410 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 470-684 |
| Cow position: | chr7:15729323-15729109 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 684-883 |
| Cow position: | chr7:15728659-15728461 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 860-972 |
| Cow position: | chr7:15728370-15728258 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 968-1104 |
| Cow position: | chr7:15727752-15727615 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1072-1226 |
| Cow position: | chr7:15727543-15727389 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1222-1419 |
| Cow position: | chr7:15727274-15727077 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1412-1677 |
| Cow position: | chr7:15726469-15726204 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1673-1785 |
| Cow position: | chr7:15725843-15725731 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1700-3192 |
| Cow position: | chr7:6442476-6441015 (view UCSC Genome Browser custom track) |
| Alignm length: | 1497 |
| Alignm identity: | 1284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1407, 465 |
| Conread position: | 1775-2140 |
| Cow position: | chr7:15724982-15724615 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 2138-2322 |
| Cow position: | chr7:15724471-15724287 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2320-2456 |
| Cow position: | chr7:15724202-15724066 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 128 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2455-3179 |
| Cow position: | chr7:15723583-15722863 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 637 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 274 |
| Conread position: | 2368-2954 |
| Cow position: | chr8:43897023-43896462 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 76 |