Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR01D120094.5
        

               Conread position:
               28-444
               

               Cow position:
               chr10:64306478-64306047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               29-302
               

               Cow position:
               chr10:43758088-43758371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               30, 75
               

               Conread position:
               29-444
               

               Cow position:
               chr10:62777015-62777440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               29-456
               

               Cow position:
               chr10:62215294-62215734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 75
               

               Conread position:
               29-501
               

               Cow position:
               chr10:11469329-11469807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               29-518
               

               Cow position:
               chr10:25497010-25497507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 72
               

               Conread position:
               29-635
               

               Cow position:
               chr10:34684556-34685176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               30-643
               

               Cow position:
               chr10:29634168-29633560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               30-803
               

               Cow position:
               chr10:54126070-54126841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               792
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               31-643
               

               Cow position:
               chr10:60488211-60488818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 69
               

               Conread position:
               31-761
               

               Cow position:
               chr10:42627082-42627804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               751
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               32-444
               

               Cow position:
               chr10:275270-275687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               32-828
               

               Cow position:
               chr10:42735117-42735911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               820
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               32-828
               

               Cow position:
               chr10:61295903-61296690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               815
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               33-417
               

               Cow position:
               chr10:54980378-54979999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 49
               

               Conread position:
               38-828
               

               Cow position:
               chr10:38547632-38546835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               821
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               43-642
               

               Cow position:
               chr10:26596158-26596764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               57-468
               

               Cow position:
               chr10:8329172-8328762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               111-454
               

               Cow position:
               chr10:10414630-10414977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 5
               

               Conread position:
               126-479
               

               Cow position:
               chr10:42657796-42658158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               45, 159
               

               Conread position:
               274-537
               

               Cow position:
               chr10:31522844-31523102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               427-808
               

               Cow position:
               chr10:39780858-39780478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               28-310
               

               Cow position:
               chr11:24676309-24676598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               28-459
               

               Cow position:
               chr11:34019241-34019666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               29-237
               

               Cow position:
               chr11:75324004-75324217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               29-456
               

               Cow position:
               chr11:21463389-21463808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 128
               

               Conread position:
               29-635
               

               Cow position:
               chr11:15996019-15996626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               396
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               30-434
               

               Cow position:
               chr11:75131797-75132203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               139, 34
               

               Conread position:
               30-444
               

               Cow position:
               chr11:37493269-37492845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               30-446
               

               Cow position:
               chr11:10211683-10211261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               30-457
               

               Cow position:
               chr11:75918894-75919332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               31-637
               

               Cow position:
               chr11:7111702-7112321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               31-645
               

               Cow position:
               chr11:52461366-52461966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               396
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               33-577
               

               Cow position:
               chr11:77778922-77778372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               41-468
               

               Cow position:
               chr11:84920948-84921378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               44-334
               

               Cow position:
               chr11:35963513-35963218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               57-451
               

               Cow position:
               chr11:25392287-25392688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               58-497
               

               Cow position:
               chr11:13057861-13057420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 23
               

               Conread position:
               61-468
               

               Cow position:
               chr11:30303634-30304053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 292
               

               Conread position:
               91-521
               

               Cow position:
               chr11:8282105-8282546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 14
               

               Conread position:
               95-474
               

               Cow position:
               chr11:40047848-40047462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               142, 6
               

               Conread position:
               109-615
               

               Cow position:
               chr11:44497216-44496716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               335
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 201
               

               Conread position:
               126-619
               

               Cow position:
               chr11:10077315-10076808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 178
               

               Conread position:
               161-445
               

               Cow position:
               chr11:9660944-9660651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               340-808
               

               Cow position:
               chr11:7393301-7393776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               349-828
               

               Cow position:
               chr11:24676614-24677097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 84
               

               Conread position:
               526-808
               

               Cow position:
               chr11:7686037-7686319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               526-828
               

               Cow position:
               chr11:76375744-76375436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               19-618
               

               Cow position:
               chr12:6615213-6615804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               394
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               152, 19
               

               Conread position:
               21-665
               

               Cow position:
               chr12:21896618-21897270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               670
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               26-518
               

               Cow position:
               chr12:22331217-22331721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               329
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               132, 75
               

               Conread position:
               26-643
               

               Cow position:
               chr12:26794751-26795367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               29-518
               

               Cow position:
               chr12:41705892-41706398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               29-643
               

               Cow position:
               chr12:26948669-26948064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 15
               

               Conread position:
               30-468
               

               Cow position:
               chr12:23989492-23989936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               284
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               30-591
               

               Cow position:
               chr12:15956924-15956350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               30-609
               

               Cow position:
               chr12:8309623-8310202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               596
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 71
               

               Conread position:
               130-828
               

               Cow position:
               chr12:22120368-22121041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               710
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 142
               

               Conread position:
               251-568
               

               Cow position:
               chr12:21059241-21058930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               111, 72
               

               Conread position:
               554-828
               

               Cow position:
               chr12:21058923-21058644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               45, 175
               

               Conread position:
               28-444
               

               Cow position:
               chr13:3275550-3275976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               29-324
               

               Cow position:
               chr13:34144518-34144214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               29-360
               

               Cow position:
               chr13:33929149-33928807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               32, 76
               

               Conread position:
               29-424
               

               Cow position:
               chr13:34691678-34692081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               29-610
               

               Cow position:
               chr13:11828666-11828101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               390
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               36, 213
               

               Conread position:
               29-804
               

               Cow position:
               chr13:34935131-34935934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               808
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               30-334
               

               Cow position:
               chr13:60649626-60649934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 29
               

               Conread position:
               30-456
               

               Cow position:
               chr13:30658563-30658129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               30-494
               

               Cow position:
               chr13:20544025-20543536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 187
               

               Conread position:
               31-423
               

               Cow position:
               chr13:33860098-33860484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               31-468
               

               Cow position:
               chr13:41590730-41591181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               31-485
               

               Cow position:
               chr13:2913880-2913427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               139, 33
               

               Conread position:
               33-551
               

               Cow position:
               chr13:20580696-20580181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               34-451
               

               Cow position:
               chr13:34769522-34769100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               57-592
               

               Cow position:
               chr13:5281660-5282211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               373
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               128-363
               

               Cow position:
               chr13:62329159-62328916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               148-454
               

               Cow position:
               chr13:49194124-49193810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               301-808
               

               Cow position:
               chr13:54283226-54283720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               519-826
               

               Cow position:
               chr13:20543541-20543251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               19-635
               

               Cow position:
               chr14:23691980-23691369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               394
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               44, 85
               

               Conread position:
               29-396
               

               Cow position:
               chr14:22242089-22242463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               29-441
               

               Cow position:
               chr14:42150777-42151204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               29-444
               

               Cow position:
               chr14:44857712-44857281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               29-473
               

               Cow position:
               chr14:42403122-42403579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               29-635
               

               Cow position:
               chr14:41086556-41085952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               392
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               41, 73
               

               Conread position:
               29-635
               

               Cow position:
               chr14:45713722-45713121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               397
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               29-643
               

               Cow position:
               chr14:47622826-47623426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               397
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               30-214
               

               Cow position:
               chr14:44224585-44224772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               30-302
               

               Cow position:
               chr14:33434336-33434056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               30-456
               

               Cow position:
               chr14:44421273-44421698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               31-506
               

               Cow position:
               chr14:44550294-44550773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               31-828
               

               Cow position:
               chr14:46082806-46083602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               813
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 72
               

               Conread position:
               32-454
               

               Cow position:
               chr14:37415301-37414867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               34-456
               

               Cow position:
               chr14:40337885-40338318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               48-504
               

               Cow position:
               chr14:45505747-45505281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               52-828
               

               Cow position:
               chr14:45305433-45304659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               793
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               57-450
               

               Cow position:
               chr14:45534150-45533753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               60-643
               

               Cow position:
               chr14:1498255-1498828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               595
               

               Alignm identity:
               377
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               190, 41
               

               Conread position:
               71-330
               

               Cow position:
               chr14:45849543-45849800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               80-445
               

               Cow position:
               chr14:35389173-35388798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               94-445
               

               Cow position:
               chr14:41771225-41771576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               98-451
               

               Cow position:
               chr14:36966089-36966452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               161-648
               

               Cow position:
               chr14:45766420-45766894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               89, 268
               

               Conread position:
               442-715
               

               Cow position:
               chr14:45159407-45159684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               448-828
               

               Cow position:
               chr14:40338288-40338668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               475-828
               

               Cow position:
               chr14:50133538-50133888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               122, 95
               

               Conread position:
               515-761
               

               Cow position:
               chr14:41771618-41771864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               518-752
               

               Cow position:
               chr14:35388747-35388509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               80, 91
               

               Conread position:
               527-826
               

               Cow position:
               chr14:45204755-45205051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               19-636
               

               Cow position:
               chr15:17273106-17272496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               399
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               26-326
               

               Cow position:
               chr15:35746591-35746895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               29-330
               

               Cow position:
               chr15:6372591-6372291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               221, 15
               

               Conread position:
               29-444
               

               Cow position:
               chr15:4731328-4731745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-471
               

               Cow position:
               chr15:23159036-23158612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               284
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               316, 46
               

               Conread position:
               29-518
               

               Cow position:
               chr15:6183412-6183915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               29-635
               

               Cow position:
               chr15:36647162-36647767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               29-646
               

               Cow position:
               chr15:4666607-4667222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               30-528
               

               Cow position:
               chr15:3039252-3038742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               327
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               31-219
               

               Cow position:
               chr15:45189344-45189535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               31-441
               

               Cow position:
               chr15:25791212-25790793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 70
               

               Conread position:
               31-444
               

               Cow position:
               chr15:6651991-6651565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 73
               

               Conread position:
               31-809
               

               Cow position:
               chr15:32681390-32680601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               811
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               32-363
               

               Cow position:
               chr15:21818326-21817987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               32-497
               

               Cow position:
               chr15:7895944-7895470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               313
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               32-828
               

               Cow position:
               chr15:35650011-35649218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               817
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               38-256
               

               Cow position:
               chr15:16592151-16591934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               48-473
               

               Cow position:
               chr15:3650585-3651028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               50-443
               

               Cow position:
               chr15:6077022-6077423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               57-619
               

               Cow position:
               chr15:4793961-4794507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 44
               

               Conread position:
               58-376
               

               Cow position:
               chr15:24792335-24792643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               192, 42
               

               Conread position:
               91-468
               

               Cow position:
               chr15:29289053-29288674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               113-712
               

               Cow position:
               chr15:36628897-36628310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               380
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               11, 115
               

               Conread position:
               118-417
               

               Cow position:
               chr15:27066527-27066236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 113
               

               Conread position:
               126-733
               

               Cow position:
               chr15:36640975-36641577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 176
               

               Conread position:
               324-828
               

               Cow position:
               chr15:16591648-16591122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               494-808
               

               Cow position:
               chr15:32692182-32692495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 66
               

               Conread position:
               515-815
               

               Cow position:
               chr15:38958468-38958176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               171, 87
               

               Conread position:
               519-828
               

               Cow position:
               chr15:7932653-7932967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               527-808
               

               Cow position:
               chr15:21817644-21817363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               551-809
               

               Cow position:
               chr15:2923224-2923485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               574-828
               

               Cow position:
               chr15:24792782-24793040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 156
               

               Conread position:
               27-298
               

               Cow position:
               chr16:29030485-29030760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               144, 45
               

               Conread position:
               29-400
               

               Cow position:
               chr16:42052453-42052079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               29-444
               

               Cow position:
               chr16:19714955-19714528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               140, 72
               

               Conread position:
               29-518
               

               Cow position:
               chr16:140398-140898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               30-214
               

               Cow position:
               chr16:42741964-42741784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               30-302
               

               Cow position:
               chr16:55650599-55650872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               222, 71
               

               Conread position:
               30-376
               

               Cow position:
               chr16:28876149-28876499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 27
               

               Conread position:
               30-444
               

               Cow position:
               chr16:29677385-29676964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               276
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               30-609
               

               Cow position:
               chr16:25256426-25257007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               385
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               30-828
               

               Cow position:
               chr16:49258733-49257970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               813
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               31-497
               

               Cow position:
               chr16:16228279-16228756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               31-648
               

               Cow position:
               chr16:28234778-28234175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               32-332
               

               Cow position:
               chr16:42106769-42107075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 72
               

               Conread position:
               32-456
               

               Cow position:
               chr16:32933720-32934158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               34-708
               

               Cow position:
               chr16:28157482-28158164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               693
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               57-463
               

               Cow position:
               chr16:20256373-20255961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               58-422
               

               Cow position:
               chr16:5886636-5886995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               99-809
               

               Cow position:
               chr16:15368166-15368901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               739
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 394
               

               Conread position:
               126-733
               

               Cow position:
               chr16:49957207-49956586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               395
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               141-807
               

               Cow position:
               chr16:25151623-25152301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               687
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               192-635
               

               Cow position:
               chr16:44085923-44086362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               231-594
               

               Cow position:
               chr16:18689062-18688706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 78
               

               Conread position:
               251-828
               

               Cow position:
               chr16:16686801-16687397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               258-827
               

               Cow position:
               chr16:36234154-36233592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               344
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 12
               

               Conread position:
               310-665
               

               Cow position:
               chr16:42741164-42741518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               37, 159
               

               Conread position:
               361-828
               

               Cow position:
               chr16:29031090-29031549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 71
               

               Conread position:
               379-706
               

               Cow position:
               chr16:42107101-42107429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               219, 85
               

               Conread position:
               379-808
               

               Cow position:
               chr16:32934155-32934597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 97
               

               Conread position:
               536-808
               

               Cow position:
               chr16:9928311-9928594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               658-816
               

               Cow position:
               chr16:18688668-18688510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               21-808
               

               Cow position:
               chr17:15369507-15370279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               798
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 77
               

               Conread position:
               23-635
               

               Cow position:
               chr17:23842453-23843061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               29-444
               

               Cow position:
               chr17:2286037-2286461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 47
               

               Conread position:
               29-518
               

               Cow position:
               chr17:22432361-22431863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               29-635
               

               Cow position:
               chr17:32025708-32025111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               389
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               30-456
               

               Cow position:
               chr17:20089394-20088968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               30-463
               

               Cow position:
               chr17:1285265-1284822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               296
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               30-518
               

               Cow position:
               chr17:44854423-44853933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               320
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               100, 24
               

               Conread position:
               30-655
               

               Cow position:
               chr17:56201-55576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               31-445
               

               Cow position:
               chr17:1774088-1774503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               138, 70
               

               Conread position:
               31-468
               

               Cow position:
               chr17:31202268-31201814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               286
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               32-635
               

               Cow position:
               chr17:23858717-23858116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               391
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               32-786
               

               Cow position:
               chr17:14327881-14327150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               776
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               32-791
               

               Cow position:
               chr17:3695391-3694626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               785
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 353
               

               Conread position:
               41-468
               

               Cow position:
               chr17:156439-156012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               53-511
               

               Cow position:
               chr17:35590766-35591221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 190
               

               Conread position:
               66-363
               

               Cow position:
               chr17:36798459-36798155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               111-436
               

               Cow position:
               chr17:1535494-1535158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               526-802
               

               Cow position:
               chr17:15416182-15416463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               28-619
               

               Cow position:
               chr18:1519834-1520413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               29-330
               

               Cow position:
               chr18:17995411-17995101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               29-423
               

               Cow position:
               chr18:53784187-53784594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               29-456
               

               Cow position:
               chr18:6871386-6870941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               290
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               29-463
               

               Cow position:
               chr18:33357570-33358013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               29-468
               

               Cow position:
               chr18:35334162-35334615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               29-619
               

               Cow position:
               chr18:43148272-43147661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               389
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               30-423
               

               Cow position:
               chr18:39745710-39746114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               28, 72
               

               Conread position:
               30-424
               

               Cow position:
               chr18:30197412-30197808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               220, 71
               

               Conread position:
               30-569
               

               Cow position:
               chr18:12263181-12263720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               349
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               48-318
               

               Cow position:
               chr18:48220055-48220331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               57-619
               

               Cow position:
               chr18:23945922-23945376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               371
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               141-811
               

               Cow position:
               chr18:43198979-43199657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               692
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               604-828
               

               Cow position:
               chr18:29235954-29236180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               17, 220
               

               Conread position:
               26-433
               

               Cow position:
               chr19:1030837-1031252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               144, 75
               

               Conread position:
               29-215
               

               Cow position:
               chr19:415686-415875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               29-442
               

               Cow position:
               chr19:29208265-29208690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               278
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-444
               

               Cow position:
               chr19:4534043-4533630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               29-516
               

               Cow position:
               chr19:24747115-24747611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               321
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               29-518
               

               Cow position:
               chr19:54714111-54713608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               322
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               29-635
               

               Cow position:
               chr19:3088127-3087519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               30-252
               

               Cow position:
               chr19:27056630-27056414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               139, 34
               

               Conread position:
               30-330
               

               Cow position:
               chr19:30370671-30370981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-636
               

               Cow position:
               chr19:40818249-40817651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               392
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               30-643
               

               Cow position:
               chr19:351884-351274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               391
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               32-362
               

               Cow position:
               chr19:353975-353641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               119-504
               

               Cow position:
               chr19:14527362-14527721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               229, 46
               

               Conread position:
               126-518
               

               Cow position:
               chr19:32664353-32664763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 91
               

               Conread position:
               126-648
               

               Cow position:
               chr19:33180-33712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 351
               

               Conread position:
               145-488
               

               Cow position:
               chr19:800823-801170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               26, 134
               

               Conread position:
               207-545
               

               Cow position:
               chr19:260448-260791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               207-798
               

               Cow position:
               chr19:39686804-39687404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               607
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 239
               

               Conread position:
               219-808
               

               Cow position:
               chr19:32224754-32224173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               283-782
               

               Cow position:
               chr19:27055385-27054885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               725-828
               

               Cow position:
               chr19:19179427-19179530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-230
               

               Cow position:
               chr20:30375945-30376159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               29-451
               

               Cow position:
               chr20:8314772-8314353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               140, 30
               

               Conread position:
               29-518
               

               Cow position:
               chr20:3253467-3252981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               320
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-594
               

               Cow position:
               chr20:19006986-19006419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 72
               

               Conread position:
               29-709
               

               Cow position:
               chr20:9522297-9521597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               710
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               32-295
               

               Cow position:
               chr20:28591862-28592133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 72
               

               Conread position:
               32-776
               

               Cow position:
               chr20:10103935-10103206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               757
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 28
               

               Conread position:
               33-238
               

               Cow position:
               chr20:39545157-39545362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               138, 59
               

               Conread position:
               33-436
               

               Cow position:
               chr20:15947918-15947504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               41-423
               

               Cow position:
               chr20:20250697-20250307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               43-641
               

               Cow position:
               chr20:31848102-31847496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               56-619
               

               Cow position:
               chr20:9956246-9955668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               94-828
               

               Cow position:
               chr20:18316941-18316203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               766
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               160-619
               

               Cow position:
               chr20:5482980-5483436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               298
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 269
               

               Conread position:
               477-828
               

               Cow position:
               chr20:11277265-11276912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               118, 96
               

               Conread position:
               539-807
               

               Cow position:
               chr20:13681994-13681725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               661-828
               

               Cow position:
               chr20:15063956-15064121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               680-796
               

               Cow position:
               chr20:10847065-10846948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               26-772
               

               Cow position:
               chr21:9890494-9891224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               759
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 78
               

               Conread position:
               29-217
               

               Cow position:
               chr21:18821543-18821353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               29-220
               

               Cow position:
               chr21:12629282-12629087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               29-409
               

               Cow position:
               chr21:4454868-4455260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 75
               

               Conread position:
               29-442
               

               Cow position:
               chr21:3425270-3425696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-456
               

               Cow position:
               chr21:4075615-4076056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-468
               

               Cow position:
               chr21:13125197-13124754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-648
               

               Cow position:
               chr21:2531355-2530744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               407
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               30-435
               

               Cow position:
               chr21:2707903-2708303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               139, 29
               

               Conread position:
               30-444
               

               Cow position:
               chr21:3799625-3799197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-760
               

               Cow position:
               chr21:3982935-3983667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               30-808
               

               Cow position:
               chr21:28873120-28873923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               817
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               31-506
               

               Cow position:
               chr21:18284117-18284604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               31-544
               

               Cow position:
               chr21:9869259-9869777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               340
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               186, 70
               

               Conread position:
               31-550
               

               Cow position:
               chr21:27560562-27561075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               32-575
               

               Cow position:
               chr21:23808387-23808952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               48-319
               

               Cow position:
               chr21:34260332-34260058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               48-468
               

               Cow position:
               chr21:2790114-2789690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               129, 53
               

               Conread position:
               49-456
               

               Cow position:
               chr21:29082853-29083272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               58-794
               

               Cow position:
               chr21:2543141-2542394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               756
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               91-518
               

               Cow position:
               chr21:34291631-34292065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               126-455
               

               Cow position:
               chr21:3357935-3357598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 185
               

               Conread position:
               160-544
               

               Cow position:
               chr21:13010216-13010598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               161-581
               

               Cow position:
               chr21:13161913-13162314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               161-806
               

               Cow position:
               chr21:15586097-15585486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               651
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               251-828
               

               Cow position:
               chr21:18821341-18820758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 127
               

               Conread position:
               252-454
               

               Cow position:
               chr21:33753705-33753909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               283-826
               

               Cow position:
               chr21:357810-358363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 63
               

               Conread position:
               475-809
               

               Cow position:
               chr21:2415370-2415703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 98
               

               Conread position:
               538-808
               

               Cow position:
               chr21:2500920-2501190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 19
               

               Conread position:
               595-825
               

               Cow position:
               chr21:23809018-23809246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               682-827
               

               Cow position:
               chr21:4182884-4183030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               17-808
               

               Cow position:
               chr22:41421268-41420464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               820
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               26-456
               

               Cow position:
               chr22:39883609-39883168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 76
               

               Conread position:
               28-329
               

               Cow position:
               chr22:37735399-37735707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               29-330
               

               Cow position:
               chr22:37145819-37146124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               29-416
               

               Cow position:
               chr22:36535278-36534884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               29-518
               

               Cow position:
               chr22:37139906-37140400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               29-617
               

               Cow position:
               chr22:1314072-1313468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               30-246
               

               Cow position:
               chr22:46545245-46545462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 73
               

               Conread position:
               30-451
               

               Cow position:
               chr22:32489025-32488593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-588
               

               Cow position:
               chr22:3308417-3307872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-660
               

               Cow position:
               chr22:42770150-42770770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               399
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               30-827
               

               Cow position:
               chr22:8879791-8880566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               810
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               30-828
               

               Cow position:
               chr22:9464021-9464793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               810
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               31-274
               

               Cow position:
               chr22:6088695-6088448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               134, 31
               

               Conread position:
               31-828
               

               Cow position:
               chr22:11029195-11029974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               818
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 78
               

               Conread position:
               32-398
               

               Cow position:
               chr22:1318025-1318401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               32-466
               

               Cow position:
               chr22:36733717-36734157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               32-635
               

               Cow position:
               chr22:5671335-5671937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               622
               

               Alignm identity:
               396
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               32-808
               

               Cow position:
               chr22:6505330-6504548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               799
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               38-619
               

               Cow position:
               chr22:40379821-40380397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               48-498
               

               Cow position:
               chr22:32481884-32481430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               48-828
               

               Cow position:
               chr22:1294965-1294171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               815
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               59-690
               

               Cow position:
               chr22:34695066-34695726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               665
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               92-754
               

               Cow position:
               chr22:1286338-1285668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               679
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               111-619
               

               Cow position:
               chr22:119133-118628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 5
               

               Conread position:
               126-364
               

               Cow position:
               chr22:17072252-17072490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               130-466
               

               Cow position:
               chr22:8137568-8137220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               41, 229
               

               Conread position:
               207-614
               

               Cow position:
               chr22:8741585-8741173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 39
               

               Conread position:
               208-808
               

               Cow position:
               chr22:1271760-1271155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               250-578
               

               Cow position:
               chr22:1317539-1317867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               258-815
               

               Cow position:
               chr22:45881334-45880787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               373-789
               

               Cow position:
               chr22:17072722-17073142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               568-808
               

               Cow position:
               chr22:46636902-46636663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               594-828
               

               Cow position:
               chr22:3307638-3307400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               631-826
               

               Cow position:
               chr22:1320740-1320935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               11-444
               

               Cow position:
               chr23:990052-989609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               15-388
               

               Cow position:
               chr23:10557779-10557404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               26-825
               

               Cow position:
               chr23:1026515-1025727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               816
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               29-518
               

               Cow position:
               chr23:2768159-2767680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               219, 72
               

               Conread position:
               30-376
               

               Cow position:
               chr23:29475079-29474723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               30-444
               

               Cow position:
               chr23:2043424-2043860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-468
               

               Cow position:
               chr23:33732478-33732929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               31-619
               

               Cow position:
               chr23:5780836-5780251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               32-468
               

               Cow position:
               chr23:16618523-16618085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               50-248
               

               Cow position:
               chr23:22881616-22881415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               57-648
               

               Cow position:
               chr23:2525840-2525254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               607
               

               Alignm identity:
               387
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               70-636
               

               Cow position:
               chr23:31592947-31592390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 31
               

               Conread position:
               116-468
               

               Cow position:
               chr23:5878486-5878124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               172-715
               

               Cow position:
               chr23:1331261-1330709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               192-458
               

               Cow position:
               chr23:3011933-3012206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               251-409
               

               Cow position:
               chr23:10375556-10375394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               84, 95
               

               Conread position:
               251-634
               

               Cow position:
               chr23:31596364-31595993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 35
               

               Conread position:
               306-605
               

               Cow position:
               chr23:10557069-10556763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               56, 25
               

               Conread position:
               548-810
               

               Cow position:
               chr23:22880675-22880412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 181
               

               Conread position:
               28-745
               

               Cow position:
               chr24:17315895-17315177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               745
               

               Alignm identity:
               469
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               29-397
               

               Cow position:
               chr24:13523661-13524044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               29-635
               

               Cow position:
               chr24:17183874-17184479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               390
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-635
               

               Cow position:
               chr24:17186229-17186834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               389
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-648
               

               Cow position:
               chr24:27206307-27206923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               406
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               30-322
               

               Cow position:
               chr24:40777774-40778075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-424
               

               Cow position:
               chr24:33358200-33358590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               30-468
               

               Cow position:
               chr24:6334355-6334796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               30-517
               

               Cow position:
               chr24:13532850-13532348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               141, 14
               

               Conread position:
               30-618
               

               Cow position:
               chr24:12235699-12236288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               386
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               30-828
               

               Cow position:
               chr24:16650689-16649905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               821
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 27
               

               Conread position:
               32-392
               

               Cow position:
               chr24:12290759-12290391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               48-593
               

               Cow position:
               chr24:36561587-36561043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               83-803
               

               Cow position:
               chr24:33431383-33432089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               634-810
               

               Cow position:
               chr24:36561025-36560847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               20-518
               

               Cow position:
               chr25:18301391-18301887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               28-455
               

               Cow position:
               chr25:15377764-15378204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 76
               

               Conread position:
               29-444
               

               Cow position:
               chr25:34660471-34660053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               275
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               155, 15
               

               Conread position:
               30-619
               

               Cow position:
               chr25:18028993-18028398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               392
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 282
               

               Conread position:
               32-454
               

               Cow position:
               chr25:18091194-18091624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               32-468
               

               Cow position:
               chr25:12836879-12836429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               48-619
               

               Cow position:
               chr25:18061929-18061366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               373
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               136, 11
               

               Conread position:
               51-537
               

               Cow position:
               chr25:18171925-18172413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 11
               

               Conread position:
               99-619
               

               Cow position:
               chr25:36238275-36238806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               253-443
               

               Cow position:
               chr25:14015118-14015313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               264-499
               

               Cow position:
               chr25:18412389-18412155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               191, 71
               

               Conread position:
               471-826
               

               Cow position:
               chr25:18276839-18276482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               127, 146
               

               Conread position:
               519-808
               

               Cow position:
               chr25:18091951-18092240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               565-803
               

               Cow position:
               chr25:18172415-18172655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               29-648
               

               Cow position:
               chr26:12575738-12575125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 65
               

               Conread position:
               29-672
               

               Cow position:
               chr26:23606249-23605604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               412
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               29-817
               

               Cow position:
               chr26:20031575-20032374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               814
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               30-430
               

               Cow position:
               chr26:21826695-21826288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-828
               

               Cow position:
               chr26:9847538-9846759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               814
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               32-798
               

               Cow position:
               chr26:9860372-9859611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               782
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               43-828
               

               Cow position:
               chr26:20300660-20299876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               812
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               50-338
               

               Cow position:
               chr26:3690649-3690938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               146, 51
               

               Conread position:
               282-724
               

               Cow position:
               chr26:21349804-21350263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               305
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 197
               

               Conread position:
               476-828
               

               Cow position:
               chr26:34012045-34012400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               119, 94
               

               Conread position:
               611-828
               

               Cow position:
               chr26:9089916-9090133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 113
               

               Conread position:
               29-656
               

               Cow position:
               chr27:16437323-16437950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               405
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               143, 72
               

               Conread position:
               30-587
               

               Cow position:
               chr27:26557443-26556875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               30-594
               

               Cow position:
               chr27:16431078-16431634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               371
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               141, 71
               

               Conread position:
               30-655
               

               Cow position:
               chr27:15330613-15331266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               658
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               31-468
               

               Cow position:
               chr27:27306985-27307425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               32-451
               

               Cow position:
               chr27:31270105-31270527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               48-463
               

               Cow position:
               chr27:27050297-27050721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               169-763
               

               Cow position:
               chr27:25115933-25116548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 276
               

               Conread position:
               662-809
               

               Cow position:
               chr27:5060491-5060342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               12-454
               

               Cow position:
               chr28:5822586-5823032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 92
               

               Conread position:
               29-214
               

               Cow position:
               chr28:2590599-2590784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               127, 72
               

               Conread position:
               29-451
               

               Cow position:
               chr28:4384748-4384317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               29-462
               

               Cow position:
               chr28:22543529-22543971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               292
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               30-425
               

               Cow position:
               chr28:5763965-5764366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               30-476
               

               Cow position:
               chr28:10292708-10293157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 10
               

               Conread position:
               30-828
               

               Cow position:
               chr28:5811266-5812070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               817
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               30-828
               

               Cow position:
               chr28:21357575-21358380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               825
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               31-666
               

               Cow position:
               chr28:21324313-21324929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               32-408
               

               Cow position:
               chr28:26005984-26006375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               33-363
               

               Cow position:
               chr28:15572300-15572635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               33-566
               

               Cow position:
               chr28:12245934-12246461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               357
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 72
               

               Conread position:
               38-248
               

               Cow position:
               chr28:24666163-24666376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               55-672
               

               Cow position:
               chr28:25706638-25706019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 46
               

               Conread position:
               57-449
               

               Cow position:
               chr28:21928012-21928411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               64-828
               

               Cow position:
               chr28:7815866-7816617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               796
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 37
               

               Conread position:
               76-808
               

               Cow position:
               chr28:17313557-17314300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               763
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               116-733
               

               Cow position:
               chr28:30563849-30564497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               654
               

               Alignm identity:
               410
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               161-609
               

               Cow position:
               chr28:2924677-2925115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               244-433
               

               Cow position:
               chr28:8722564-8722382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               251-808
               

               Cow position:
               chr28:25784306-25784860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               266-828
               

               Cow position:
               chr28:24666423-24666974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               271-586
               

               Cow position:
               chr28:7791924-7791613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 68
               

               Conread position:
               475-805
               

               Cow position:
               chr28:1388351-1388024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               123, 95
               

               Conread position:
               524-828
               

               Cow position:
               chr28:10620049-10619740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 208
               

               Conread position:
               526-808
               

               Cow position:
               chr28:26006522-26006808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               70, 116
               

               Conread position:
               526-828
               

               Cow position:
               chr28:8722384-8722097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               142, 70
               

               Conread position:
               554-828
               

               Cow position:
               chr28:2990877-2990604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               597-809
               

               Cow position:
               chr28:7791104-7790889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               675-807
               

               Cow position:
               chr28:2925129-2925263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               19-612
               

               Cow position:
               chr29:30696987-30696403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               391
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               28-485
               

               Cow position:
               chr29:21545043-21544573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               29-634
               

               Cow position:
               chr29:27263954-27263359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               30-468
               

               Cow position:
               chr29:35195350-35195799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               31-463
               

               Cow position:
               chr29:10849482-10849054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               31-619
               

               Cow position:
               chr29:15287965-15288570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               32-455
               

               Cow position:
               chr29:34753760-34753324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               39-556
               

               Cow position:
               chr29:8659808-8660327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               41-817
               

               Cow position:
               chr29:102568-103349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               806
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               96-423
               

               Cow position:
               chr29:27600251-27600575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 5
               

               Conread position:
               106-403
               

               Cow position:
               chr29:45465758-45465463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 10
               

               Conread position:
               300-828
               

               Cow position:
               chr29:2751566-2751053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               536-808
               

               Cow position:
               chr29:34753217-34752944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 44
               

               Conread position:
               651-808
               

               Cow position:
               chr29:45465207-45465051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               12-587
               

               Cow position:
               chr8:51861164-51860592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 93
               

               Conread position:
               20-544
               

               Cow position:
               chr8:54825628-54825097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               29-362
               

               Cow position:
               chr8:24421960-24421615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               29-444
               

               Cow position:
               chr8:1584300-1584726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               29-468
               

               Cow position:
               chr8:39952314-39951859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               29-518
               

               Cow position:
               chr8:23215636-23216139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               29-636
               

               Cow position:
               chr8:45318254-45317655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               30-345
               

               Cow position:
               chr8:58187442-58187141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               30-423
               

               Cow position:
               chr8:38609199-38608790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               30-454
               

               Cow position:
               chr8:42163746-42163329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               139, 34
               

               Conread position:
               30-501
               

               Cow position:
               chr8:21204518-21204991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-531
               

               Cow position:
               chr8:9541945-9541469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               30-594
               

               Cow position:
               chr8:30416765-30417321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               30-619
               

               Cow position:
               chr8:27092869-27092270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               30-619
               

               Cow position:
               chr8:47669304-47669884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               30-828
               

               Cow position:
               chr8:11756471-11757274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               821
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               30-828
               

               Cow position:
               chr8:11971802-11970995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               827
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               31-364
               

               Cow position:
               chr8:45162774-45162440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               31-444
               

               Cow position:
               chr8:27985184-27984759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               41-667
               

               Cow position:
               chr8:50751462-50752115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               660
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               43-451
               

               Cow position:
               chr8:44691916-44692332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 57
               

               Conread position:
               64-243
               

               Cow position:
               chr8:25540041-25540220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               74-551
               

               Cow position:
               chr8:61037436-61036956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               91-468
               

               Cow position:
               chr8:40573069-40572690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               122-423
               

               Cow position:
               chr8:12545464-12545166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               167-471
               

               Cow position:
               chr8:19228796-19229096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               83, 173
               

               Conread position:
               175-460
               

               Cow position:
               chr8:53423925-53424215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               91, 158
               

               Conread position:
               199-619
               

               Cow position:
               chr8:45188076-45188492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 111
               

               Conread position:
               251-469
               

               Cow position:
               chr8:42383691-42383468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 16
               

               Conread position:
               297-828
               

               Cow position:
               chr8:25540989-25541539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 181
               

               Conread position:
               298-618
               

               Cow position:
               chr8:46218976-46218655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               55, 179
               

               Conread position:
               371-806
               

               Cow position:
               chr8:45162395-45161972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 40
               

               Conread position:
               519-826
               

               Cow position:
               chr8:38608686-38608388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               198, 77
               

               Conread position:
               526-807
               

               Cow position:
               chr8:44692428-44692720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               72, 207
               

               Conread position:
               527-793
               

               Cow position:
               chr8:44121128-44121391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               539-733
               

               Cow position:
               chr8:9541153-9540957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               646-808
               

               Cow position:
               chr8:24421401-24421238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               140
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               657-806
               

               Cow position:
               chr8:26623031-26623180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               18-446
               

               Cow position:
               chr9:3154567-3155014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 86
               

               Conread position:
               26-444
               

               Cow position:
               chr9:8970546-8970128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               28-302
               

               Cow position:
               chr9:54113147-54113430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               28-388
               

               Cow position:
               chr9:31019299-31019668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               28-606
               

               Cow position:
               chr9:652617-652041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               595
               

               Alignm identity:
               368
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               29-302
               

               Cow position:
               chr9:3144518-3144234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               29-302
               

               Cow position:
               chr9:3149113-3148829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               29-463
               

               Cow position:
               chr9:10313910-10314351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               29-467
               

               Cow position:
               chr9:15071062-15071512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               30-441
               

               Cow position:
               chr9:28627866-28627446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               30-444
               

               Cow position:
               chr9:29358492-29358920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               30-448
               

               Cow position:
               chr9:44794067-44794517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               31-761
               

               Cow position:
               chr9:13218630-13219400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               775
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               32-246
               

               Cow position:
               chr9:11320941-11321159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               32-645
               

               Cow position:
               chr9:833000-832380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 33
               

               Conread position:
               32-785
               

               Cow position:
               chr9:2006644-2005864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               805
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               32-828
               

               Cow position:
               chr9:3801948-3802738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               817
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               33-246
               

               Cow position:
               chr9:64006593-64006812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               48-409
               

               Cow position:
               chr9:54359363-54359726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               21, 56
               

               Conread position:
               60-364
               

               Cow position:
               chr9:3585299-3585609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               123-468
               

               Cow position:
               chr9:2112449-2112804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               49, 115
               

               Conread position:
               168-451
               

               Cow position:
               chr9:56863517-56863231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               168-808
               

               Cow position:
               chr9:18001825-18002453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               654
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               185-468
               

               Cow position:
               chr9:34109199-34108906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               535-808
               

               Cow position:
               chr9:11321418-11321687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               10-619
               

               Cow position:
               chrX:22776415-22777009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               19-389
               

               Cow position:
               chrX:29784904-29784528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               165, 82
               

               Conread position:
               20-444
               

               Cow position:
               chrX:21057876-21058312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               21-635
               

               Cow position:
               chrX:6911369-6910754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               632
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 83
               

               Conread position:
               23-444
               

               Cow position:
               chrX:21599069-21599502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               26-442
               

               Cow position:
               chrX:30047716-30047292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               26-463
               

               Cow position:
               chrX:21291075-21290627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               28-504
               

               Cow position:
               chrX:26898245-26897780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               306
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               144, 31
               

               Conread position:
               29-328
               

               Cow position:
               chrX:20802472-20802776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               29-444
               

               Cow position:
               chrX:30991552-30991127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               276
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               142, 72
               

               Conread position:
               29-444
               

               Cow position:
               chrX:35016201-35016629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               29-445
               

               Cow position:
               chrX:24123694-24123267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               29-451
               

               Cow position:
               chrX:39716207-39716648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               29-456
               

               Cow position:
               chrX:13008220-13007783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               30-567
               

               Cow position:
               chrX:31033791-31034335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 71
               

               Conread position:
               30-619
               

               Cow position:
               chrX:24137994-24137406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               605
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               30-638
               

               Cow position:
               chrX:11670098-11669478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               30-648
               

               Cow position:
               chrX:25331476-25332090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 49
               
30-708UCSC Genome Browser
               Conread position:
               
               

               Cow position:
               chrX:42451128-42450445 (view  custom track)
               

               Alignm length:
               692
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 29
               
30-828UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chrX:21791034-21791833 (view  custom track)

               
               
               
Alignm length: 813

               
               
               
Alignm identity: 576

               
               
               
Alignm E-value: 0

               
               
               
Alignm gaps (pig, cow): 140, 26
31-444UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chrX:21634165-21633737 (view  custom track)

               
               
               
Alignm length: 430

               
               
               
Alignm identity: 287

               
               
               
Alignm E-value: 0

               
               
               
Alignm gaps (pig, cow): 19, 75

               
               
               Conread position:31-451
               
               
               Cow position:chrX:26503591-26504024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 72

               
               
               Conread position:31-619
               
               
               Cow position:chrX:8907463-8908034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:607
               
               
               Alignm identity:382
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):30, 73

               
               
               Conread position:31-828
               
               
               Cow position:chrX:35015217-35015997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:815
               
               
               Alignm identity:550
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):141, 39

               
               
               Conread position:32-387
               
               
               Cow position:chrX:17672516-17672149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:253
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):26, 78

               
               
               Conread position:32-454
               
               
               Cow position:chrX:30372017-30371594 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:266
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):23, 43

               
               
               Conread position:32-672
               
               
               Cow position:chrX:22133615-22132960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:666
               
               
               Alignm identity:408
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):25, 74

               
               
               Conread position:33-828
               
               
               Cow position:chrX:6362472-6361644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:838
               
               
               Alignm identity:549
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 70

               
               
               Conread position:48-468
               
               
               Cow position:chrX:5836262-5835827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 56

               
               
               Conread position:58-643
               
               
               Cow position:chrX:26837659-26838237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:599
               
               
               Alignm identity:364
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):71, 47

               
               
               Conread position:58-670
               
               
               Cow position:chrX:35956256-35955623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:640
               
               
               Alignm identity:416
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 43

               
               
               Conread position:118-456
               
               
               Cow position:chrX:26633489-26633137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:228
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):53, 198

               
               
               Conread position:161-828
               
               
               Cow position:chrX:6284741-6284074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:682
               
               
               Alignm identity:458
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 66

               
               
               Conread position:174-645
               
               
               Cow position:chrX:30144980-30144497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:489
               
               
               Alignm identity:319
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):76, 101

               
               
               Conread position:208-808
               
               
               Cow position:chrX:28552520-28553125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:614
               
               
               Alignm identity:421
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 167

               
               
               Conread position:208-826
               
               
               Cow position:chrX:21585520-21586139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:634
               
               
               Alignm identity:457
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 277

               
               
               Conread position:251-828
               
               
               Cow position:chrX:2537865-2537293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:586
               
               
               Alignm identity:413
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):102, 50

               
               
               Conread position:382-587
               
               
               Cow position:chrX:17670480-17670266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):74, 98

               
               
               Conread position:400-808
               
               
               Cow position:chrX:31371659-31372063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 84

               
               
               Conread position:440-828
               
               
               Cow position:chrX:25041688-25041304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:275
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):7, 38

               
               
               Conread position:553-827
               
               
               Cow position:chrX:31034548-31034826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:205
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):45, 116

               
               
               Conread position:622-815
               
               
               Cow position:chrX:16018205-16018012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):92, 102

               
               
               Conread position:657-819
               
               
               Cow position:chrX:17670006-17669844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):19, 15
Conread position:	28-444
Cow position:	chr10:64306478-64306047 (view UCSC Genome Browser custom track)
Alignm length:	433
Alignm identity:	281
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	31, 76
Conread position:	29-302
Cow position:	chr10:43758088-43758371 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	187
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	30, 75
Conread position:	29-444
Cow position:	chr10:62777015-62777440 (view UCSC Genome Browser custom track)
Alignm length:	428
Alignm identity:	289
Alignm E-value:	0
Alignm gaps (pig, cow):	35, 75
Conread position:	29-456
Cow position:	chr10:62215294-62215734 (view UCSC Genome Browser custom track)
Alignm length:	442
Alignm identity:	279
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	30, 75
Conread position:	29-501
Cow position:	chr10:11469329-11469807 (view UCSC Genome Browser custom track)
Alignm length:	489
Alignm identity:	326
Alignm E-value:	0
Alignm gaps (pig, cow):	32, 75
Conread position:	29-518
Cow position:	chr10:25497010-25497507 (view UCSC Genome Browser custom track)
Alignm length:	500
Alignm identity:	322
Alignm E-value:	0
Alignm gaps (pig, cow):	221, 72
Conread position:	29-635
Cow position:	chr10:34684556-34685176 (view UCSC Genome Browser custom track)
Alignm length:	628
Alignm identity:	408
Alignm E-value:	0
Alignm gaps (pig, cow):	36, 78
Conread position:	30-643
Cow position:	chr10:29634168-29633560 (view UCSC Genome Browser custom track)
Alignm length:	632
Alignm identity:	408
Alignm E-value:	0
Alignm gaps (pig, cow):	31, 74
Conread position:	30-803
Cow position:	chr10:54126070-54126841 (view UCSC Genome Browser custom track)
Alignm length:	792
Alignm identity:	547
Alignm E-value:	0
Alignm gaps (pig, cow):	31, 74
Conread position:	31-643
Cow position:	chr10:60488211-60488818 (view UCSC Genome Browser custom track)
Alignm length:	624
Alignm identity:	407
Alignm E-value:	0
Alignm gaps (pig, cow):	140, 69
Conread position:	31-761
Cow position:	chr10:42627082-42627804 (view UCSC Genome Browser custom track)
Alignm length:	751
Alignm identity:	495
Alignm E-value:	0
Alignm gaps (pig, cow):	34, 8
Conread position:	32-444
Cow position:	chr10:275270-275687 (view UCSC Genome Browser custom track)
Alignm length:	425
Alignm identity:	279
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	7, 73
Conread position:	32-828
Cow position:	chr10:42735117-42735911 (view UCSC Genome Browser custom track)
Alignm length:	820
Alignm identity:	578
Alignm E-value:	0
Alignm gaps (pig, cow):	101, 11
Conread position:	33-417
Cow position:	chr10:54980378-54979999 (view UCSC Genome Browser custom track)
Alignm length:	389
Alignm identity:	273
Alignm E-value:	0
Alignm gaps (pig, cow):	136, 49
Conread position:	38-828
Cow position:	chr10:38547632-38546835 (view UCSC Genome Browser custom track)
Alignm length:	821
Alignm identity:	548
Alignm E-value:	0
Alignm gaps (pig, cow):	25, 67
Conread position:	43-642
Cow position:	chr10:26596158-26596764 (view UCSC Genome Browser custom track)
Alignm length:	616
Alignm identity:	401
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 83
Conread position:	57-468
Cow position:	chr10:8329172-8328762 (view UCSC Genome Browser custom track)
Alignm length:	424
Alignm identity:	282
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	21, 44
Conread position:	111-454
Cow position:	chr10:10414630-10414977 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	223
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	63, 5
Conread position:	126-479
Cow position:	chr10:42657796-42658158 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	242
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	45, 159
Conread position:	274-537
Cow position:	chr10:31522844-31523102 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	194
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	32, 134