Cow genome map
| Conread name: | Ss1.1-blip-UMC-pblivp1-006-e05.3.5 |
| Conread position: | 500-670 |
| Cow position: | chr19:33772617-33772787 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-686 |
| Cow position: | chr19:33975616-33975789 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 92 |
| Conread position: | 247-423 |
| Cow position: | chr23:327542-327721 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 249-429 |
| Cow position: | chr23:432118-432301 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 250-419 |
| Cow position: | chr23:318349-318521 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 250-423 |
| Cow position: | chr23:371202-371378 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 510-670 |
| Cow position: | chr23:442469-442629 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 96 |
| Conread position: | 513-670 |
| Cow position: | chr23:456232-456390 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 960-1178 |
| Cow position: | chr23:331428-331643 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 81 |
| Conread position: | 960-1179 |
| Cow position: | chr23:341546-341762 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 960-1179 |
| Cow position: | chr23:373985-374201 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 960-1183 |
| Cow position: | chr23:443655-443875 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 960-1184 |
| Cow position: | chr23:457048-457269 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 960-1184 |
| Cow position: | chr23:537380-537601 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 968-1184 |
| Cow position: | chr23:497173-497386 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 968-1184 |
| Cow position: | chr23:562293-562506 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 968-1184 |
| Cow position: | chr23:584698-584911 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 968-1184 |
| Cow position: | chr23:602636-602849 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 968-1184 |
| Cow position: | chr23:625276-625489 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 970-1184 |
| Cow position: | chr23:487413-487624 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 69 |
| Conread position: | 978-1184 |
| Cow position: | chr23:475313-475516 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 1-429 |
| Cow position: | chr5:20417999-20418444 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 427-515 |
| Cow position: | chr5:20419223-20419311 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 513-670 |
| Cow position: | chr5:20419586-20419743 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 668-845 |
| Cow position: | chr5:20420286-20420463 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 827-960 |
| Cow position: | chr5:20420547-20420680 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 123 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 960-1183 |
| Cow position: | chr5:20420866-20421089 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1182-1366 |
| Cow position: | chr5:20421381-20421565 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-672 |
| Cow position: | chr7:267376-267663 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 189 |
| Conread position: | 700-1378 |
| Cow position: | chr7:267662-268333 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |