Cow genome map
| Conread name: | Ss1.1-mCP0-MI-P-CP0-nwc-g-02-0-UI.s1.3 |
| Conread position: | 412-533 |
| Cow position: | chr1:51598358-51598482 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 412-543 |
| Cow position: | chr1:29922795-29922667 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 412-543 |
| Cow position: | chr1:32029858-32029724 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 412-544 |
| Cow position: | chr1:34693276-34693148 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 125 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-539 |
| Cow position: | chr10:59314956-59315079 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 121 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-519 |
| Cow position: | chr11:20797630-20797527 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 412-544 |
| Cow position: | chr11:18917-19043 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 412-544 |
| Cow position: | chr11:54483238-54483110 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 124 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-525 |
| Cow position: | chr13:51215815-51215928 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-539 |
| Cow position: | chr13:19466841-19466714 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-542 |
| Cow position: | chr15:15058908-15058773 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-502 |
| Cow position: | chr16:42512888-42512798 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-530 |
| Cow position: | chr16:52772347-52772246 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-544 |
| Cow position: | chr17:3452796-3452923 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 408-542 |
| Cow position: | chr18:49656948-49656814 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 412-544 |
| Cow position: | chr18:32368743-32368615 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 124 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-544 |
| Cow position: | chr18:36348875-36348747 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 124 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-512 |
| Cow position: | chr19:2593757-2593858 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 412-542 |
| Cow position: | chr19:9092428-9092558 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-543 |
| Cow position: | chr19:28807535-28807409 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 412-538 |
| Cow position: | chr20:37983813-37983935 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 412-543 |
| Cow position: | chr20:12721024-12720897 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-531 |
| Cow position: | chr21:8064652-8064535 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 407-538 |
| Cow position: | chr23:17122478-17122347 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-544 |
| Cow position: | chr24:36907157-36907289 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-666 |
| Cow position: | chr25:11809011-11809280 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 128 |
| Conread position: | 416-541 |
| Cow position: | chr26:11960452-11960579 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 405-513 |
| Cow position: | chr3:68595290-68595398 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-542 |
| Cow position: | chr3:5422029-5422155 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 122 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 412-543 |
| Cow position: | chr3:58898255-58898385 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 412-556 |
| Cow position: | chr4:1276137-1275997 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-542 |
| Cow position: | chr8:44868062-44868191 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 412-543 |
| Cow position: | chr8:45209071-45209198 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 123 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 412-544 |
| Cow position: | chr9:56078036-56078164 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 123 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 108, 0 |