Cow genome map
| Conread name: | Ss1.1-mE4-MI-P-E4-ahg-c-05-1-UM.s1.3 |
| Conread position: | 5-201 |
| Cow position: | chr10:31077805-31077609 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 7-196 |
| Cow position: | chr10:50704341-50704160 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 7-258 |
| Cow position: | chr10:24235850-24236105 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 144 |
| Conread position: | 203-408 |
| Cow position: | chr10:31077442-31077249 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 65-198 |
| Cow position: | chr11:40000580-40000447 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 270-408 |
| Cow position: | chr13:5002700-5002842 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 311-414 |
| Cow position: | chr13:12767609-12767506 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 46-201 |
| Cow position: | chr14:39154636-39154478 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 275-416 |
| Cow position: | chr15:8460722-8460865 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 74-201 |
| Cow position: | chr16:2286490-2286362 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 248-408 |
| Cow position: | chr16:25614787-25614947 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 106-417 |
| Cow position: | chr17:34347765-34348059 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 7-201 |
| Cow position: | chr18:52466689-52466882 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 7-205 |
| Cow position: | chr18:9373268-9373063 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 55-417 |
| Cow position: | chr18:16353330-16352978 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 259-416 |
| Cow position: | chr18:9372772-9372611 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 170-351 |
| Cow position: | chr19:8204320-8204491 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 126, 88 |
| Conread position: | 259-422 |
| Cow position: | chr19:973238-973072 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 76-201 |
| Cow position: | chr2:36916376-36916247 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 259-416 |
| Cow position: | chr20:20623052-20622897 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 150-260 |
| Cow position: | chr21:27621444-27621334 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-201 |
| Cow position: | chr22:12755964-12755774 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 7-417 |
| Cow position: | chr22:35434837-35434432 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 211 |
| Conread position: | 289-421 |
| Cow position: | chr24:40464780-40464914 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 66-421 |
| Cow position: | chr25:38162048-38162385 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 253-402 |
| Cow position: | chr27:10069808-10069961 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 257-402 |
| Cow position: | chr27:15469601-15469451 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 7-417 |
| Cow position: | chr28:26288771-26288371 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 60-235 |
| Cow position: | chr28:5829729-5829555 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 259-432 |
| Cow position: | chr28:8783184-8783359 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 90-417 |
| Cow position: | chr3:3935124-3934810 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 7-424 |
| Cow position: | chr7:49360694-49360285 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 264-408 |
| Cow position: | chr7:17351325-17351471 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 264-408 |
| Cow position: | chr7:17354104-17353958 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 55-417 |
| Cow position: | chr8:18077721-18077373 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 97 |
| Conread position: | 55-203 |
| Cow position: | chr9:29170355-29170499 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 53 |