Cow genome map
| Conread name: | Ss1.1-mO1-MI-P-O1-abx-f-01-1-UM.s1.3.5 |
| Conread position: | 613-947 |
| Cow position: | chr10:23524299-23524630 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 616-1035 |
| Cow position: | chr10:52642424-52641993 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 36 |
| Conread position: | 661-1057 |
| Cow position: | chr10:10118758-10118365 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 706-1058 |
| Cow position: | chr10:69929020-69928667 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 823-1132 |
| Cow position: | chr10:48096419-48096740 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 613-835 |
| Cow position: | chr11:4435635-4435411 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 613-1053 |
| Cow position: | chr11:21569691-21570142 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 200, 7 |
| Conread position: | 613-1082 |
| Cow position: | chr11:64469782-64469303 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 44 |
| Conread position: | 616-1001 |
| Cow position: | chr11:29810984-29810599 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 617-1056 |
| Cow position: | chr11:56290023-56289603 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 267, 40 |
| Conread position: | 618-924 |
| Cow position: | chr11:36203680-36203971 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 192, 12 |
| Conread position: | 620-1060 |
| Cow position: | chr11:68267200-68266755 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 305 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 627-923 |
| Cow position: | chr11:64167537-64167236 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 142, 31 |
| Conread position: | 640-870 |
| Cow position: | chr11:77014913-77014684 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 640-1065 |
| Cow position: | chr11:47981355-47981781 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 653-991 |
| Cow position: | chr11:39488763-39488434 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 230, 11 |
| Conread position: | 671-1036 |
| Cow position: | chr11:41361660-41362018 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 794-1054 |
| Cow position: | chr11:15169672-15169422 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 798-1295 |
| Cow position: | chr11:45690847-45691360 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 335 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 274 |
| Conread position: | 810-1060 |
| Cow position: | chr11:73008911-73009169 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 627-967 |
| Cow position: | chr12:4106839-4107183 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 155, 30 |
| Conread position: | 652-1035 |
| Cow position: | chr12:43614667-43615055 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 879-1060 |
| Cow position: | chr12:14488344-14488528 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 50 |
| Conread position: | 616-1084 |
| Cow position: | chr13:57466779-57467258 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 626-907 |
| Cow position: | chr13:16332056-16331774 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 652-1356 |
| Cow position: | chr13:19337859-19337125 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 479 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 660-1291 |
| Cow position: | chr13:38703780-38703143 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 423 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 707-1168 |
| Cow position: | chr13:915474-915960 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 828-1071 |
| Cow position: | chr13:27839106-27839348 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 101 |
| Conread position: | 613-939 |
| Cow position: | chr14:39437112-39437422 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 629-887 |
| Cow position: | chr14:18958288-18958552 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 146, 36 |
| Conread position: | 639-1162 |
| Cow position: | chr14:15038625-15039167 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 70 |
| Conread position: | 641-1060 |
| Cow position: | chr14:11612756-11613172 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 607-1034 |
| Cow position: | chr15:35189987-35189561 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 172, 27 |
| Conread position: | 613-1057 |
| Cow position: | chr15:596357-595908 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 613-1295 |
| Cow position: | chr15:22783088-22782378 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 616-928 |
| Cow position: | chr15:6859686-6859379 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 616-1056 |
| Cow position: | chr15:25755326-25754883 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 616-1057 |
| Cow position: | chr15:23345465-23345034 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 147, 41 |
| Conread position: | 621-755 |
| Cow position: | chr15:41896571-41896702 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 629-1111 |
| Cow position: | chr15:21595267-21594770 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 330 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 151, 28 |
| Conread position: | 634-1056 |
| Cow position: | chr15:26887924-26887488 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 736-1056 |
| Cow position: | chr15:50925519-50925855 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 787-1082 |
| Cow position: | chr15:49007747-49007437 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 850-1296 |
| Cow position: | chr15:3604344-3603878 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 610-1056 |
| Cow position: | chr16:13112074-13111624 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 40 |
| Conread position: | 613-942 |
| Cow position: | chr16:45820320-45819998 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 206, 27 |
| Conread position: | 613-983 |
| Cow position: | chr16:54484441-54484067 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 167, 44 |
| Conread position: | 616-1037 |
| Cow position: | chr16:42286853-42286428 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 293 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 629-903 |
| Cow position: | chr16:44923330-44923053 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 862-1061 |
| Cow position: | chr16:52576999-52577205 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 605-969 |
| Cow position: | chr17:1310724-1310362 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 33 |
| Conread position: | 617-940 |
| Cow position: | chr17:30882262-30882579 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 169, 10 |
| Conread position: | 620-1162 |
| Cow position: | chr17:14204049-14204590 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 37 |
| Conread position: | 626-1085 |
| Cow position: | chr17:41710750-41710309 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 82, 31 |
| Conread position: | 627-1013 |
| Cow position: | chr17:31704654-31704275 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 644-1057 |
| Cow position: | chr17:41099512-41099090 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 653-1295 |
| Cow position: | chr17:7717134-7716484 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 444 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 607-975 |
| Cow position: | chr18:30381040-30381410 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 613-978 |
| Cow position: | chr18:36813842-36814209 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 191, 45 |
| Conread position: | 616-927 |
| Cow position: | chr18:50594957-50594644 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 166, 41 |
| Conread position: | 617-871 |
| Cow position: | chr18:27149378-27149135 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 667-953 |
| Cow position: | chr18:28663762-28664048 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 684-1060 |
| Cow position: | chr18:22404097-22403717 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 613-1056 |
| Cow position: | chr19:22443553-22443121 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 299 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 613-1366 |
| Cow position: | chr19:41811629-41810880 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 505 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 167, 44 |
| Conread position: | 667-885 |
| Cow position: | chr19:31281451-31281234 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 816-1084 |
| Cow position: | chr19:6071361-6071636 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 613-903 |
| Cow position: | chr20:14961570-14961282 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 200, 33 |
| Conread position: | 613-1061 |
| Cow position: | chr20:6204158-6203706 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 44 |
| Conread position: | 616-970 |
| Cow position: | chr20:35098360-35098009 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 621-1295 |
| Cow position: | chr20:829717-829039 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 435 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 165, 103 |
| Conread position: | 634-1056 |
| Cow position: | chr20:5588173-5588601 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 640-1061 |
| Cow position: | chr20:18343511-18343072 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 654-1057 |
| Cow position: | chr20:13128544-13128129 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 71 |
| Conread position: | 772-1037 |
| Cow position: | chr20:40810416-40810140 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 613-1060 |
| Cow position: | chr21:21655576-21655123 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 44 |
| Conread position: | 618-993 |
| Cow position: | chr21:29780079-29780453 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 629-989 |
| Cow position: | chr21:24148553-24148191 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 154, 29 |
| Conread position: | 613-993 |
| Cow position: | chr22:22924468-22924075 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 44 |
| Conread position: | 708-1051 |
| Cow position: | chr23:15392425-15392751 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 16 |
| Conread position: | 626-1061 |
| Cow position: | chr24:41310099-41309651 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 31 |
| Conread position: | 626-1062 |
| Cow position: | chr24:40775258-40774830 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 630-1055 |
| Cow position: | chr24:32973431-32973863 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 693-929 |
| Cow position: | chr24:25370921-25371155 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 125, 31 |
| Conread position: | 808-1073 |
| Cow position: | chr24:24216293-24216024 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 654-1037 |
| Cow position: | chr25:16059602-16059980 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 126, 70 |
| Conread position: | 613-928 |
| Cow position: | chr26:31607056-31606742 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 173, 37 |
| Conread position: | 616-976 |
| Cow position: | chr26:3807834-3808205 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 174, 41 |
| Conread position: | 616-1076 |
| Cow position: | chr26:6492249-6492716 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 618-991 |
| Cow position: | chr26:17464648-17464269 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 163, 39 |
| Conread position: | 619-984 |
| Cow position: | chr26:9596887-9597244 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 627-1085 |
| Cow position: | chr26:34170415-34170896 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 87, 30 |
| Conread position: | 794-1298 |
| Cow position: | chr26:23595331-23595843 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 340 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 705-910 |
| Cow position: | chr27:10439042-10438837 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 770-1057 |
| Cow position: | chr27:7200398-7200689 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 613-882 |
| Cow position: | chr28:17090183-17090452 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 96, 133 |
| Conread position: | 616-955 |
| Cow position: | chr28:13464608-13464268 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 177, 41 |
| Conread position: | 620-1310 |
| Cow position: | chr28:20704374-20705037 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 445 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 168, 7 |
| Conread position: | 667-1057 |
| Cow position: | chr28:19156312-19156713 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 113, 51 |
| Conread position: | 811-1126 |
| Cow position: | chr28:23542583-23542265 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 616-1295 |
| Cow position: | chr29:28277300-28276603 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 42 |
| Conread position: | 621-1057 |
| Cow position: | chr29:29951279-29950829 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 36 |
| Conread position: | 654-1133 |
| Cow position: | chr29:26263937-26264433 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 334 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 128, 70 |
| Conread position: | 705-1061 |
| Cow position: | chr29:29704983-29705355 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 840-1057 |
| Cow position: | chr29:25874696-25874923 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-1085 |
| Cow position: | chr6:39367835-39368939 (view UCSC Genome Browser custom track) |
| Alignm length: | 1130 |
| Alignm identity: | 821 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 158 |
| Conread position: | 613-1056 |
| Cow position: | chr6:8626795-8627224 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 613-1061 |
| Cow position: | chr6:61660818-61660366 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 616-1105 |
| Cow position: | chr6:21621010-21621514 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 166, 41 |
| Conread position: | 624-1056 |
| Cow position: | chr6:14128866-14129298 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 85, 33 |
| Conread position: | 660-1073 |
| Cow position: | chr6:37450862-37451272 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 724-993 |
| Cow position: | chr6:68363259-68362987 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 227 |
| Conread position: | 613-1037 |
| Cow position: | chr7:21816724-21817154 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 613-1056 |
| Cow position: | chr7:35153340-35153766 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 48 |
| Conread position: | 619-1100 |
| Cow position: | chr7:24942130-24941648 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 320 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 627-1064 |
| Cow position: | chr7:13630575-13630143 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 155, 30 |
| Conread position: | 675-1162 |
| Cow position: | chr7:30711032-30711526 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 706-901 |
| Cow position: | chr7:8831994-8831796 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 610-1049 |
| Cow position: | chr8:6516892-6516439 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 613-998 |
| Cow position: | chr8:30045779-30045389 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 613-1293 |
| Cow position: | chr8:13519395-13520099 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 452 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 616-1050 |
| Cow position: | chr8:1307980-1307540 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 173, 36 |
| Conread position: | 707-1037 |
| Cow position: | chr8:3176142-3175820 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 610-1061 |
| Cow position: | chr9:34424526-34424086 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 132, 114 |
| Conread position: | 610-1148 |
| Cow position: | chr9:17854876-17855426 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 47 |
| Conread position: | 613-993 |
| Cow position: | chr9:63589865-63590251 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 613-1084 |
| Cow position: | chr9:38457031-38457505 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 22 |
| Conread position: | 616-1085 |
| Cow position: | chr9:33034962-33034486 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 620-820 |
| Cow position: | chr9:19441061-19441260 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 37 |
| Conread position: | 620-1041 |
| Cow position: | chr9:21106039-21105614 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 621-811 |
| Cow position: | chr9:56251749-56251939 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 625-1005 |
| Cow position: | chr9:7166029-7165654 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 161, 40 |
| Conread position: | 627-1060 |
| Cow position: | chr9:40037048-40037486 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 159, 97 |
| Conread position: | 639-887 |
| Cow position: | chr9:2974710-2974474 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 812-1057 |
| Cow position: | chr9:13521258-13521513 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 208 |
| Conread position: | 613-815 |
| Cow position: | chrX:23446268-23446469 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 157, 44 |
| Conread position: | 613-874 |
| Cow position: | chrX:20498781-20498525 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 147, 44 |
| Conread position: | 613-879 |
| Cow position: | chrX:9278274-9278017 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 613-1056 |
| Cow position: | chrX:38319093-38318646 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 173, 17 |
| Conread position: | 613-1057 |
| Cow position: | chrX:42339623-42339190 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 162, 44 |
| Conread position: | 614-1060 |
| Cow position: | chrX:11417265-11417714 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 43 |
| Conread position: | 616-1084 |
| Cow position: | chrX:16925342-16925819 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 41 |
| Conread position: | 617-1057 |
| Cow position: | chrX:8903269-8902819 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 618-1033 |
| Cow position: | chrX:27479391-27478987 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 168, 43 |
| Conread position: | 771-991 |
| Cow position: | chrX:1567583-1567816 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 811-1019 |
| Cow position: | chrX:9897238-9897455 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |