Cow genome map
| Conread name: | Ss1.1-rcbl0_005307.5 |
| Conread position: | 590-912 |
| Cow position: | chr1:605286-605622 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 592-912 |
| Cow position: | chr1:80303287-80302953 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 6, 29 |
| Conread position: | 594-784 |
| Cow position: | chr1:88966484-88966675 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 594-912 |
| Cow position: | chr1:13219661-13219329 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 594-912 |
| Cow position: | chr1:26078392-26078061 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 594-912 |
| Cow position: | chr1:68775614-68775278 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 594-912 |
| Cow position: | chr1:69068650-69068986 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 597-904 |
| Cow position: | chr1:72849606-72849292 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 597-910 |
| Cow position: | chr1:14380034-14380353 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 597-912 |
| Cow position: | chr1:23086970-23087295 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 601-912 |
| Cow position: | chr1:7174517-7174841 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 602-912 |
| Cow position: | chr1:76327393-76327070 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 604-870 |
| Cow position: | chr1:82150318-82150580 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 609-912 |
| Cow position: | chr1:53127848-53128156 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 622-875 |
| Cow position: | chr1:56866477-56866734 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 624-885 |
| Cow position: | chr1:54904694-54904959 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 205 |
| Conread position: | 626-881 |
| Cow position: | chr1:2966205-2965936 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 626-912 |
| Cow position: | chr1:880375-880081 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 629-850 |
| Cow position: | chr1:64253781-64254013 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 8, 185 |
| Conread position: | 658-912 |
| Cow position: | chr1:23515801-23516073 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 39 |
| Conread position: | 675-910 |
| Cow position: | chr1:3003110-3003351 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 679-910 |
| Cow position: | chr1:35243412-35243643 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 156, 7 |
| Conread position: | 682-912 |
| Cow position: | chr1:60258522-60258281 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 589-891 |
| Cow position: | chr10:60255520-60255233 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 593-885 |
| Cow position: | chr10:49992368-49992060 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 594-912 |
| Cow position: | chr10:68317263-68317597 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 598-766 |
| Cow position: | chr10:63739576-63739409 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 607-912 |
| Cow position: | chr10:33959956-33960265 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 612-911 |
| Cow position: | chr10:27429429-27429127 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 622-910 |
| Cow position: | chr10:45989834-45989542 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 629-912 |
| Cow position: | chr10:17121531-17121831 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 657-912 |
| Cow position: | chr10:42889511-42889241 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 662-910 |
| Cow position: | chr10:48664790-48664552 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 662-912 |
| Cow position: | chr10:60043342-60043608 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 571-907 |
| Cow position: | chr11:74393291-74392954 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 581-912 |
| Cow position: | chr11:47610083-47609731 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 587-885 |
| Cow position: | chr11:44023952-44024264 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 589-833 |
| Cow position: | chr11:23169222-23169464 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 592-912 |
| Cow position: | chr11:77723924-77723595 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 593-910 |
| Cow position: | chr11:21577267-21577598 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 596-833 |
| Cow position: | chr11:81907926-81908172 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 597-857 |
| Cow position: | chr11:23584776-23584522 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 623-904 |
| Cow position: | chr11:50301838-50302123 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 629-912 |
| Cow position: | chr11:16999731-17000036 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 629-912 |
| Cow position: | chr11:39233218-39233517 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 634-912 |
| Cow position: | chr11:69089230-69089518 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 97 |
| Conread position: | 663-912 |
| Cow position: | chr11:81327132-81327387 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 677-912 |
| Cow position: | chr11:1438210-1438453 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 593-782 |
| Cow position: | chr12:34590621-34590809 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 171 |
| Conread position: | 597-885 |
| Cow position: | chr12:12022514-12022219 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 597-885 |
| Cow position: | chr12:27766946-27767242 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 607-912 |
| Cow position: | chr12:37844512-37844830 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 622-912 |
| Cow position: | chr12:38897898-38897593 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 662-885 |
| Cow position: | chr12:30178850-30178612 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 693-908 |
| Cow position: | chr12:30197658-30197891 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 588-910 |
| Cow position: | chr13:14369630-14369956 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 597-871 |
| Cow position: | chr13:51585538-51585269 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 597-912 |
| Cow position: | chr13:20129557-20129886 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 598-911 |
| Cow position: | chr13:37307240-37306921 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 604-912 |
| Cow position: | chr13:54769706-54770028 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 615-911 |
| Cow position: | chr13:42899762-42900072 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 622-910 |
| Cow position: | chr13:55797722-55798023 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 625-905 |
| Cow position: | chr13:10971115-10971403 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 626-881 |
| Cow position: | chr13:11996889-11996626 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 662-912 |
| Cow position: | chr13:15620105-15619843 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 684-912 |
| Cow position: | chr13:21435810-21436053 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 40-468 |
| Cow position: | chr14:34935089-34934673 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 432-910 |
| Cow position: | chr14:34934674-34934178 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 595-912 |
| Cow position: | chr14:18961359-18961025 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 597-776 |
| Cow position: | chr14:41809926-41810104 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 599-768 |
| Cow position: | chr14:27265310-27265140 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 602-906 |
| Cow position: | chr14:27542377-27542692 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 625-912 |
| Cow position: | chr14:14271849-14272148 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 121 |
| Conread position: | 629-912 |
| Cow position: | chr14:1759575-1759286 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 639-884 |
| Cow position: | chr14:36479046-36479293 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 107 |
| Conread position: | 654-881 |
| Cow position: | chr14:15864891-15864663 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 120 |
| Conread position: | 654-912 |
| Cow position: | chr14:34661523-34661798 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 573-885 |
| Cow position: | chr15:41025659-41025972 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 594-885 |
| Cow position: | chr15:33750213-33750502 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 597-832 |
| Cow position: | chr15:23120390-23120629 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 608-871 |
| Cow position: | chr15:31057804-31057540 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 619-912 |
| Cow position: | chr15:2060867-2061176 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 622-851 |
| Cow position: | chr15:47386223-47386462 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 622-912 |
| Cow position: | chr15:26721902-26722212 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 631-881 |
| Cow position: | chr15:47702699-47702441 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 707-912 |
| Cow position: | chr15:37255866-37256072 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 547-783 |
| Cow position: | chr16:12929303-12929538 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 594-910 |
| Cow position: | chr16:20680828-20681159 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 624-902 |
| Cow position: | chr16:44697942-44697672 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 625-885 |
| Cow position: | chr16:43360055-43360327 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 626-912 |
| Cow position: | chr16:20211704-20211998 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 657-910 |
| Cow position: | chr16:38974005-38973743 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 660-908 |
| Cow position: | chr16:14719094-14718833 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 597-885 |
| Cow position: | chr17:20241527-20241808 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 597-908 |
| Cow position: | chr17:1539868-1540184 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 599-871 |
| Cow position: | chr17:12352573-12352294 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 621-871 |
| Cow position: | chr17:28168553-28168813 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 622-874 |
| Cow position: | chr17:20827343-20827078 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 622-912 |
| Cow position: | chr17:11099036-11099349 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 625-871 |
| Cow position: | chr17:13200628-13200387 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 594-881 |
| Cow position: | chr18:31397463-31397760 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 596-765 |
| Cow position: | chr18:32318363-32318531 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 597-776 |
| Cow position: | chr18:49604312-49604129 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 597-912 |
| Cow position: | chr18:35520789-35521119 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 597-912 |
| Cow position: | chr18:50783980-50783663 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 619-912 |
| Cow position: | chr18:33796642-33796947 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 625-903 |
| Cow position: | chr18:32726920-32726620 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 626-905 |
| Cow position: | chr18:18888025-18888327 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 629-912 |
| Cow position: | chr18:21718874-21719159 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 8, 142 |
| Conread position: | 637-885 |
| Cow position: | chr18:10732677-10732924 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 658-912 |
| Cow position: | chr18:43208987-43208712 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 98 |
| Conread position: | 663-912 |
| Cow position: | chr18:15908537-15908279 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 675-876 |
| Cow position: | chr18:48109740-48109524 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 677-903 |
| Cow position: | chr18:25023510-25023265 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 679-912 |
| Cow position: | chr18:35765802-35765551 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 584-907 |
| Cow position: | chr19:2210391-2210057 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 35 |
| Conread position: | 591-867 |
| Cow position: | chr19:8110785-8111074 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 609-882 |
| Cow position: | chr19:20938983-20939253 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 688-912 |
| Cow position: | chr19:34024006-34024244 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 589-912 |
| Cow position: | chr2:47297443-47297790 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 593-767 |
| Cow position: | chr2:63738432-63738259 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 594-871 |
| Cow position: | chr2:13268106-13268388 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 594-885 |
| Cow position: | chr2:11147981-11147695 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 594-912 |
| Cow position: | chr2:73932688-73932376 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 597-912 |
| Cow position: | chr2:40485501-40485823 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 597-912 |
| Cow position: | chr2:70544439-70544763 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 616-909 |
| Cow position: | chr2:14319811-14320114 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 622-889 |
| Cow position: | chr2:81300070-81300354 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 625-912 |
| Cow position: | chr2:65727529-65727221 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 625-912 |
| Cow position: | chr2:81360939-81360639 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 633-912 |
| Cow position: | chr2:25133921-25134200 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 636-912 |
| Cow position: | chr2:59168552-59168255 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 636-912 |
| Cow position: | chr2:74638959-74638665 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 214 |
| Conread position: | 662-910 |
| Cow position: | chr2:12291269-12291009 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 665-912 |
| Cow position: | chr2:43097650-43097399 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 677-912 |
| Cow position: | chr2:14306571-14306317 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 594-911 |
| Cow position: | chr20:27586344-27586016 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 598-885 |
| Cow position: | chr20:16811126-16811416 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 599-912 |
| Cow position: | chr20:2218243-2217939 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 662-912 |
| Cow position: | chr20:19308101-19308360 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 151 |
| Conread position: | 681-912 |
| Cow position: | chr20:38883799-38883555 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 591-882 |
| Cow position: | chr21:32408856-32408556 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 594-871 |
| Cow position: | chr21:48614731-48615022 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 597-871 |
| Cow position: | chr21:5345237-5345505 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 597-873 |
| Cow position: | chr21:10636625-10636905 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 597-885 |
| Cow position: | chr21:42229494-42229790 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 622-912 |
| Cow position: | chr21:19288169-19288463 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 626-833 |
| Cow position: | chr21:36369043-36369252 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 160 |
| Conread position: | 629-870 |
| Cow position: | chr21:944489-944238 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 630-885 |
| Cow position: | chr21:13364186-13363938 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 667-912 |
| Cow position: | chr21:36816678-36816940 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 588-871 |
| Cow position: | chr22:17231059-17231357 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 588-912 |
| Cow position: | chr22:21213687-21214028 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 597-911 |
| Cow position: | chr22:26714067-26714398 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 625-867 |
| Cow position: | chr22:40283438-40283692 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 638-912 |
| Cow position: | chr22:42275805-42275516 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 590-778 |
| Cow position: | chr23:8927553-8927366 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 116, 177 |
| Conread position: | 591-869 |
| Cow position: | chr23:29634137-29633856 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 593-907 |
| Cow position: | chr23:24758696-24759027 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 593-912 |
| Cow position: | chr23:41114144-41113823 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 597-849 |
| Cow position: | chr23:37000660-37000921 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 597-871 |
| Cow position: | chr23:7566421-7566144 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 597-881 |
| Cow position: | chr23:37280213-37280498 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 622-869 |
| Cow position: | chr23:30302493-30302753 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 228 |
| Conread position: | 622-912 |
| Cow position: | chr23:24843948-24843639 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 699-909 |
| Cow position: | chr23:37624521-37624307 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 168 |
| Conread position: | 588-880 |
| Cow position: | chr24:43372246-43372545 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 594-912 |
| Cow position: | chr24:23427339-23427000 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 597-884 |
| Cow position: | chr24:39798612-39798318 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 623-906 |
| Cow position: | chr24:44607734-44608021 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 626-910 |
| Cow position: | chr24:10533950-10534257 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 639-912 |
| Cow position: | chr24:32412572-32412287 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 659-908 |
| Cow position: | chr24:36075196-36074937 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 186 |
| Conread position: | 593-908 |
| Cow position: | chr25:15249632-15249961 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 597-912 |
| Cow position: | chr25:8888484-8888820 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 320 |
| Conread position: | 601-885 |
| Cow position: | chr25:8419451-8419148 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 604-767 |
| Cow position: | chr25:25611522-25611359 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 610-912 |
| Cow position: | chr25:28972982-28972687 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 612-912 |
| Cow position: | chr25:2421015-2421319 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 625-882 |
| Cow position: | chr25:37396746-37397017 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 263 |
| Conread position: | 636-912 |
| Cow position: | chr25:12887969-12888259 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 639-912 |
| Cow position: | chr25:19137098-19137386 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 689-912 |
| Cow position: | chr25:40742239-40742006 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 594-871 |
| Cow position: | chr26:25713310-25713592 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 594-905 |
| Cow position: | chr26:25388730-25389051 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 622-778 |
| Cow position: | chr26:30657269-30657427 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 622-871 |
| Cow position: | chr26:17009934-17010195 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 234 |
| Conread position: | 627-886 |
| Cow position: | chr26:21385546-21385281 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 641-912 |
| Cow position: | chr26:24579763-24579475 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 656-912 |
| Cow position: | chr26:34006498-34006227 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 594-912 |
| Cow position: | chr27:14916082-14915754 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 597-909 |
| Cow position: | chr27:7489198-7489524 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 607-881 |
| Cow position: | chr27:22227319-22227597 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 622-912 |
| Cow position: | chr27:15452126-15451808 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 597-912 |
| Cow position: | chr28:28179137-28179465 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 173, 22 |
| Conread position: | 607-912 |
| Cow position: | chr28:29451439-29451131 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 619-912 |
| Cow position: | chr28:33715490-33715779 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 625-871 |
| Cow position: | chr28:33065006-33065264 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 81 |
| Conread position: | 626-912 |
| Cow position: | chr28:2852804-2852499 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 631-911 |
| Cow position: | chr28:33435425-33435720 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 28 |
| Conread position: | 633-909 |
| Cow position: | chr28:33876579-33876881 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 664-850 |
| Cow position: | chr28:3480759-3480565 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 597-871 |
| Cow position: | chr29:19765438-19765719 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 597-912 |
| Cow position: | chr29:19494029-19493705 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 618-912 |
| Cow position: | chr29:1198935-1198632 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 625-912 |
| Cow position: | chr29:24795160-24795442 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 142 |
| Conread position: | 629-912 |
| Cow position: | chr29:2598340-2598033 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 639-887 |
| Cow position: | chr29:16427588-16427848 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 181 |
| Conread position: | 663-911 |
| Cow position: | chr29:18967160-18966902 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 568-908 |
| Cow position: | chr3:76282059-76282419 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 589-912 |
| Cow position: | chr3:12590379-12590703 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 591-909 |
| Cow position: | chr3:40781364-40781043 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 592-912 |
| Cow position: | chr3:78916405-78916742 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 594-869 |
| Cow position: | chr3:17609944-17609663 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 597-782 |
| Cow position: | chr3:58984634-58984448 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 597-889 |
| Cow position: | chr3:48482882-48482586 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 597-903 |
| Cow position: | chr3:44075459-44075146 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 597-910 |
| Cow position: | chr3:58240582-58240252 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 597-912 |
| Cow position: | chr3:12662626-12662962 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 597-912 |
| Cow position: | chr3:28446519-28446187 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 597-912 |
| Cow position: | chr3:63804930-63805241 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 607-912 |
| Cow position: | chr3:21832924-21833232 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 169, 31 |
| Conread position: | 614-909 |
| Cow position: | chr3:21068613-21068911 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 622-885 |
| Cow position: | chr3:34471997-34471722 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 622-912 |
| Cow position: | chr3:25098183-25098499 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 299 |
| Conread position: | 626-912 |
| Cow position: | chr3:48484867-48484555 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 631-830 |
| Cow position: | chr3:5720620-5720821 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 134 |
| Conread position: | 636-910 |
| Cow position: | chr3:79378441-79378150 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 210 |
| Conread position: | 636-912 |
| Cow position: | chr3:52410102-52410396 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 200 |
| Conread position: | 657-912 |
| Cow position: | chr3:34202521-34202782 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 688-912 |
| Cow position: | chr3:70124129-70124359 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 594-910 |
| Cow position: | chr4:39971368-39971698 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 595-909 |
| Cow position: | chr4:44483773-44483450 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 597-885 |
| Cow position: | chr4:1200605-1200301 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 597-912 |
| Cow position: | chr4:46243767-46243434 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 616-885 |
| Cow position: | chr4:29092352-29092080 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 622-912 |
| Cow position: | chr4:56854465-56854768 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 626-910 |
| Cow position: | chr4:43461396-43461682 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 629-910 |
| Cow position: | chr4:2863440-2863733 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 629-910 |
| Cow position: | chr4:64674655-64674951 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 636-912 |
| Cow position: | chr4:36171921-36171630 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 657-870 |
| Cow position: | chr4:43425984-43426201 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 675-912 |
| Cow position: | chr4:28058890-28059145 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 680-912 |
| Cow position: | chr4:22135346-22135108 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 580-911 |
| Cow position: | chr5:45880028-45880371 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 594-912 |
| Cow position: | chr5:15797976-15797644 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 595-843 |
| Cow position: | chr5:53982823-53983082 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 597-885 |
| Cow position: | chr5:40905661-40905951 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 597-906 |
| Cow position: | chr5:46656634-46656304 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 597-911 |
| Cow position: | chr5:27500197-27500516 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 597-912 |
| Cow position: | chr5:13437779-13438106 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 604-910 |
| Cow position: | chr5:36365046-36364724 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 622-912 |
| Cow position: | chr5:30180876-30180578 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 149 |
| Conread position: | 625-893 |
| Cow position: | chr5:69562641-69562911 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 626-904 |
| Cow position: | chr5:14329199-14328903 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 677-881 |
| Cow position: | chr5:18032077-18031871 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 587-911 |
| Cow position: | chr6:50140258-50139920 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 589-869 |
| Cow position: | chr6:9251415-9251694 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 592-906 |
| Cow position: | chr6:20127936-20128262 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 597-855 |
| Cow position: | chr6:42830431-42830173 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 597-882 |
| Cow position: | chr6:23017152-23017446 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 606-870 |
| Cow position: | chr6:9024607-9024879 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 614-797 |
| Cow position: | chr6:47863721-47863905 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 622-787 |
| Cow position: | chr6:18684709-18684545 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 156 |
| Conread position: | 624-885 |
| Cow position: | chr6:8455925-8455658 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 625-910 |
| Cow position: | chr6:64407850-64407553 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 636-869 |
| Cow position: | chr6:59149404-59149645 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 636-884 |
| Cow position: | chr6:59254604-59254343 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 133, 106 |
| Conread position: | 636-912 |
| Cow position: | chr6:23529922-23529638 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 140, 66 |
| Conread position: | 636-912 |
| Cow position: | chr6:35709394-35709102 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 657-912 |
| Cow position: | chr6:35216623-35216892 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 659-912 |
| Cow position: | chr6:3558870-3559130 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 659-912 |
| Cow position: | chr6:12543927-12543660 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 179 |
| Conread position: | 662-910 |
| Cow position: | chr6:18613965-18614224 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 584-912 |
| Cow position: | chr7:23956526-23956199 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 594-912 |
| Cow position: | chr7:50450484-50450153 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 597-871 |
| Cow position: | chr7:64778749-64778481 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 597-911 |
| Cow position: | chr7:46958416-46958088 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 597-912 |
| Cow position: | chr7:58225448-58225132 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 621-912 |
| Cow position: | chr7:40073134-40072842 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 137 |
| Conread position: | 622-905 |
| Cow position: | chr7:16029500-16029792 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 625-912 |
| Cow position: | chr7:3418681-3418985 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 625-912 |
| Cow position: | chr7:48858607-48858301 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 625-912 |
| Cow position: | chr7:52942621-52942923 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 12, 194 |
| Conread position: | 662-871 |
| Cow position: | chr7:14867217-14866997 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 677-911 |
| Cow position: | chr7:31399148-31399385 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 703-911 |
| Cow position: | chr7:8500356-8500145 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 6, 83 |
| Conread position: | 592-886 |
| Cow position: | chr8:21976080-21976375 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 593-885 |
| Cow position: | chr8:45825171-45824874 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 594-871 |
| Cow position: | chr8:5962181-5962465 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 614-912 |
| Cow position: | chr8:21187943-21187624 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 620-889 |
| Cow position: | chr8:25492237-25491974 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 622-912 |
| Cow position: | chr8:33441278-33440971 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 624-782 |
| Cow position: | chr8:22963676-22963512 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 624-911 |
| Cow position: | chr8:37699405-37699118 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 626-912 |
| Cow position: | chr8:8003285-8003589 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 626-912 |
| Cow position: | chr8:47445996-47446292 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 632-870 |
| Cow position: | chr8:31759876-31760126 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 657-885 |
| Cow position: | chr8:24385107-24384873 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 677-885 |
| Cow position: | chr8:50985812-50985595 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 677-912 |
| Cow position: | chr8:55196666-55196916 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 109 |
| Conread position: | 589-912 |
| Cow position: | chr9:39780828-39780486 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 594-772 |
| Cow position: | chr9:27796547-27796722 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 594-871 |
| Cow position: | chr9:19980136-19979854 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 594-908 |
| Cow position: | chr9:35462432-35462112 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 597-912 |
| Cow position: | chr9:46659274-46659611 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 607-912 |
| Cow position: | chr9:44356737-44357057 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 622-912 |
| Cow position: | chr9:60075160-60074859 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 625-912 |
| Cow position: | chr9:38030684-38030993 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 627-912 |
| Cow position: | chr9:8226477-8226760 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 170 |
| Conread position: | 630-871 |
| Cow position: | chr9:19496414-19496164 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 636-912 |
| Cow position: | chr9:32822814-32822532 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 145 |
| Conread position: | 591-832 |
| Cow position: | chrX:35817995-35818242 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 49 |
| Conread position: | 591-910 |
| Cow position: | chrX:27088699-27089031 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 597-910 |
| Cow position: | chrX:9477040-9477373 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 597-912 |
| Cow position: | chrX:31286259-31286599 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 605-881 |
| Cow position: | chrX:32907741-32908027 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 607-885 |
| Cow position: | chrX:8507448-8507168 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 622-881 |
| Cow position: | chrX:12106237-12106506 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 625-912 |
| Cow position: | chrX:4315403-4315715 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 625-912 |
| Cow position: | chrX:8737548-8737848 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 626-912 |
| Cow position: | chrX:11847895-11847598 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 72 |
| Conread position: | 626-912 |
| Cow position: | chrX:26362391-26362692 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 98 |