Cow genome map
| Conread name: | Ss1.1-rcbl0_023823.5 |
| Conread position: | 230-383 |
| Cow position: | chr1:81825888-81826045 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 158-381 |
| Cow position: | chr10:29744295-29744520 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 167, 12 |
| Conread position: | 158-383 |
| Cow position: | chr10:25502399-25502627 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 159, 57 |
| Conread position: | 179-344 |
| Cow position: | chr10:25932018-25931850 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 146, 42 |
| Conread position: | 72-245 |
| Cow position: | chr12:28254704-28254525 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 106 |
| Conread position: | 166-382 |
| Cow position: | chr14:26159400-26159181 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 158, 49 |
| Conread position: | 121-386 |
| Cow position: | chr15:6174356-6174622 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 163-381 |
| Cow position: | chr15:6184591-6184806 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 160, 7 |
| Conread position: | 158-382 |
| Cow position: | chr16:23666709-23666483 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 163-350 |
| Cow position: | chr16:32592201-32592018 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 175-355 |
| Cow position: | chr16:21566726-21566903 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-126 |
| Cow position: | chr17:31602242-31602118 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 116-356 |
| Cow position: | chr17:31601848-31601601 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 158-391 |
| Cow position: | chr17:2805751-2805533 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 168, 46 |
| Conread position: | 1-270 |
| Cow position: | chr18:44763070-44762788 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 158-323 |
| Cow position: | chr19:36474999-36474836 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 165-396 |
| Cow position: | chr19:13877808-13877574 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 150, 15 |
| Conread position: | 166-381 |
| Cow position: | chr19:28439724-28439925 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 221-355 |
| Cow position: | chr19:4324560-4324426 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-381 |
| Cow position: | chr21:20776149-20775897 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 44-381 |
| Cow position: | chr22:12667864-12667514 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 190-381 |
| Cow position: | chr22:12964396-12964202 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 163-387 |
| Cow position: | chr23:11730710-11730489 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 170-381 |
| Cow position: | chr23:23937574-23937360 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 141, 45 |
| Conread position: | 180-365 |
| Cow position: | chr23:8201415-8201229 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 146 |
| Conread position: | 251-386 |
| Cow position: | chr24:16956787-16956925 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 112 |
| Conread position: | 219-376 |
| Cow position: | chr25:33789202-33789361 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 107, 136 |
| Conread position: | 259-389 |
| Cow position: | chr25:24491867-24492000 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 166-380 |
| Cow position: | chr26:17662139-17661930 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 166-359 |
| Cow position: | chr27:25168376-25168572 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 159, 49 |
| Conread position: | 2-396 |
| Cow position: | chr28:8638208-8638600 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 217 |
| Conread position: | 165-377 |
| Cow position: | chr29:39588206-39588419 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 152, 50 |
| Conread position: | 3-323 |
| Cow position: | chr3:69218847-69219167 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 16 |
| Conread position: | 158-345 |
| Cow position: | chr3:35467342-35467151 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 151-384 |
| Cow position: | chr4:44648805-44649040 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 19 |
| Conread position: | 1-164 |
| Cow position: | chr5:67954550-67954714 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 139 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 158-385 |
| Cow position: | chr5:2190726-2190496 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 166-406 |
| Cow position: | chr5:69097346-69097588 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 2-381 |
| Cow position: | chr6:26948085-26947694 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 198 |
| Conread position: | 8-381 |
| Cow position: | chr7:43306307-43305917 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 217 |
| Conread position: | 151-388 |
| Cow position: | chrX:41748718-41748950 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 157-354 |
| Cow position: | chrX:30096179-30096379 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 14 |