Cow genome map
| Conread name: | Ss1.1-rcbr0_004402.5.5 |
| Conread position: | 438-636 |
| Cow position: | chr1:72557463-72557660 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 160-418 |
| Cow position: | chr10:49444988-49444733 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 446-636 |
| Cow position: | chr10:49444678-49444491 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 456-636 |
| Cow position: | chr10:7907395-7907574 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 240-385 |
| Cow position: | chr11:9281037-9281177 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 71 |
| Conread position: | 537-636 |
| Cow position: | chr11:45512614-45512518 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 484-636 |
| Cow position: | chr12:23120166-23120015 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 236-341 |
| Cow position: | chr13:56327702-56327597 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 458-600 |
| Cow position: | chr14:18407869-18407730 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 542-636 |
| Cow position: | chr14:33423540-33423446 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-595 |
| Cow position: | chr16:1219430-1219252 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 487-636 |
| Cow position: | chr16:13213254-13213402 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 492-636 |
| Cow position: | chr16:43679702-43679843 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 236-630 |
| Cow position: | chr17:22514981-22514580 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 220 |
| Conread position: | 247-329 |
| Cow position: | chr17:25553113-25553031 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-636 |
| Cow position: | chr17:25552972-25552786 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 446-630 |
| Cow position: | chr18:48769911-48769733 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 475-636 |
| Cow position: | chr2:78378009-78377848 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 480-636 |
| Cow position: | chr2:50181428-50181273 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 261-385 |
| Cow position: | chr21:40856765-40856888 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 356-585 |
| Cow position: | chr21:2937313-2937095 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 442-636 |
| Cow position: | chr21:23613313-23613120 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 496-636 |
| Cow position: | chr22:40607211-40607068 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 419-595 |
| Cow position: | chr27:17570923-17570745 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 423-636 |
| Cow position: | chr27:631531-631321 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 488-636 |
| Cow position: | chr27:29012195-29012342 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 130 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 159-417 |
| Cow position: | chr29:5118842-5118583 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 235 |
| Conread position: | 401-636 |
| Cow position: | chr29:18407534-18407766 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 469-618 |
| Cow position: | chr29:5118581-5118433 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 513-636 |
| Cow position: | chr3:70317073-70317196 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-636 |
| Cow position: | chr5:55181319-55181128 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 442-596 |
| Cow position: | chr7:53366409-53366260 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 528-636 |
| Cow position: | chr7:39556564-39556456 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-338 |
| Cow position: | chr8:15408143-15407964 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-636 |
| Cow position: | chr9:39578809-39578911 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |