Cow genome map

Conread name: Ss1.1-rcbr0_007653.5

Conread position: 1-205
Cow position: chr1:21932334-21932535 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 36

Conread position: 1-205
Cow position: chr1:43691872-43692075 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 35

Conread position: 1-205
Cow position: chr1:50936426-50936634 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 176

Conread position: 1-205
Cow position: chr1:74980663-74980867 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 35

Conread position: 1-205
Cow position: chr1:78967976-78968179 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 30

Conread position: 1-208
Cow position: chr1:59406238-59406445 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 35

Conread position: 1-208
Cow position: chr1:86878086-86878298 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 34

Conread position: 1-210
Cow position: chr1:71448530-71448323 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 35

Conread position: 3-205
Cow position: chr1:87432621-87432821 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 38

Conread position: 8-219
Cow position: chr1:71740143-71739933 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 178, 27

Conread position: 1-202
Cow position: chr10:59001431-59001633 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 35

Conread position: 1-204
Cow position: chr10:47984085-47984291 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 21

Conread position: 1-218
Cow position: chr10:46085363-46085142 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 176

Conread position: 1-220
Cow position: chr10:4553038-4553258 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 20

Conread position: 1-221
Cow position: chr10:25478396-25478178 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 187, 37

Conread position: 3-208
Cow position: chr10:63650858-63651066 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 32

Conread position: 8-202
Cow position: chr10:53209995-53210188 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 48

Conread position: 8-217
Cow position: chr10:6845531-6845321 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 180, 29

Conread position: 9-219
Cow position: chr10:54155664-54155878 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 2-156
Cow position: chr11:21757438-21757282 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 34

Conread position: 187-492
Cow position: chr11:10750148-10750470 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 157

Conread position: 1-196
Cow position: chr12:35538285-35538089 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 35

Conread position: 1-205
Cow position: chr13:46717818-46718021 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 182, 15

Conread position: 1-208
Cow position: chr13:34502203-34501992 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 35

Conread position: 1-210
Cow position: chr13:13252155-13251941 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 35

Conread position: 1-213
Cow position: chr13:31415458-31415242 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 167

Conread position: 40-204
Cow position: chr13:34709923-34709757 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 1-196
Cow position: chr14:19008013-19007812 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 35

Conread position: 1-200
Cow position: chr14:13320628-13320427 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 40

Conread position: 1-207
Cow position: chr14:39359534-39359734 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 34

Conread position: 1-218
Cow position: chr14:38308046-38308275 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 34

Conread position: 1-221
Cow position: chr14:10054795-10054573 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 130

Conread position: 2-205
Cow position: chr14:14318269-14318066 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 34

Conread position: 9-205
Cow position: chr14:18127172-18126974 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 48

Conread position: 1-204
Cow position: chr15:15121632-15121836 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 35

Conread position: 1-215
Cow position: chr15:40140761-40140968 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 65

Conread position: 9-164
Cow position: chr15:8261393-8261239 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 1-173
Cow position: chr16:43699580-43699751 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 43

Conread position: 1-209
Cow position: chr16:26693006-26692800 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 35

Conread position: 8-213
Cow position: chr16:16386403-16386606 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 152

Conread position: 1-209
Cow position: chr17:34151571-34151786 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 34

Conread position: 1-214
Cow position: chr17:8532835-8533042 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 195, 12

Conread position: 2-203
Cow position: chr17:11737166-11737368 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 33

Conread position: 1-205
Cow position: chr18:24714022-24714227 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 187, 38

Conread position: 8-215
Cow position: chr18:23457570-23457363 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 26

Conread position: 8-203
Cow position: chr2:18163877-18163682 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 175, 26

Conread position: 45-203
Cow position: chr2:61085878-61085719 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 141, 129

Conread position: 1-196
Cow position: chr20:28061623-28061819 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 40

Conread position: 1-195
Cow position: chr21:34927745-34927941 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 167

Conread position: 3-208
Cow position: chr21:45301176-45300973 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 33

Conread position: 10-209
Cow position: chr21:28564048-28563850 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 25

Conread position: 10-232
Cow position: chr21:32325268-32325492 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 23

Conread position: 1-219
Cow position: chr22:36258820-36259037 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 8, 34

Conread position: 8-151
Cow position: chr22:1558865-1558724 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-149
Cow position: chr23:29274267-29274118 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 75

Conread position: 1-204
Cow position: chr23:10879254-10879048 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 35

Conread position: 1-205
Cow position: chr24:9819360-9819562 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 34

Conread position: 8-202
Cow position: chr24:21704978-21705175 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 24

Conread position: 3-197
Cow position: chr25:22188293-22188485 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 181, 32

Conread position: 8-205
Cow position: chr25:35253541-35253737 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 27

Conread position: 1-492
Cow position: chr26:26487699-26487229 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 33

Conread position: 4-208
Cow position: chr27:24160645-24160853 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 160

Conread position: 8-205
Cow position: chr27:21171624-21171820 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 180, 26

Conread position: 13-212
Cow position: chr27:25776806-25777011 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-212
Cow position: chr28:22841751-22841538 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 35

Conread position: 44-202
Cow position: chr28:15578705-15578542 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 107

Conread position: 8-205
Cow position: chr29:45388035-45387840 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 20

Conread position: 1-218
Cow position: chr3:14798061-14798286 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 165

Conread position: 21-205
Cow position: chr3:57365517-57365336 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 165, 14

Conread position: 1-274
Cow position: chr4:9643270-9643001 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 34

Conread position: 8-208
Cow position: chr4:49836341-49836540 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 32

Conread position: 11-204
Cow position: chr4:26943104-26942910 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 170, 155

Conread position: 2-208
Cow position: chr5:28989143-28988937 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 33

Conread position: 3-205
Cow position: chr5:29779407-29779610 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 33

Conread position: 8-205
Cow position: chr5:68369450-68369648 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 36

Conread position: 8-228
Cow position: chr5:36441307-36441525 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 173, 27

Conread position: 1-205
Cow position: chr7:10013841-10014048 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 52

Conread position: 1-208
Cow position: chr7:4757845-4758052 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 35

Conread position: 8-125
Cow position: chr7:30654641-30654526 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 8-219
Cow position: chr7:40434805-40435019 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 32

Conread position: 1-199
Cow position: chr8:49495066-49494866 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 38

Conread position: 1-206
Cow position: chr8:49796283-49796064 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 35

Conread position: 1-211
Cow position: chr8:6034911-6034703 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 34

Conread position: 1-205
Cow position: chr9:30152186-30152391 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 35

Conread position: 1-225
Cow position: chr9:20214384-20214614 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 37

Conread position: 3-203
Cow position: chr9:84937-85136 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 33

Conread position: 4-211
Cow position: chr9:14551039-14551247 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 32

Conread position: 8-208
Cow position: chr9:19699629-19699833 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 152, 26

Conread position: 1-196
Cow position: chrX:18151482-18151678 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 35

Conread position: 1-205
Cow position: chrX:37229425-37229220 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 34

Conread position: 2-204
Cow position: chrX:20946828-20947037 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 8-205
Cow position: chrX:5382225-5382026 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 28

Conread position: 8-219
Cow position: chrX:3617946-3617732 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 31

Conread position: 43-205
Cow position: chrX:40321257-40321093 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 143, 0