Cow genome map
| Conread name: | Ss1.1-rche29_e3.5 |
| Conread position: | 1-172 |
| Cow position: | chr10:61436120-61435948 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 1-288 |
| Cow position: | chr10:29323400-29323115 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 1-340 |
| Cow position: | chr10:55510312-55510637 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 4-347 |
| Cow position: | chr10:9499649-9499987 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 122-371 |
| Cow position: | chr10:1788852-1789103 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 217-347 |
| Cow position: | chr10:61435925-61435796 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 234-347 |
| Cow position: | chr10:14386651-14386761 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 1-182 |
| Cow position: | chr11:10015974-10016150 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 4-420 |
| Cow position: | chr11:38007025-38006599 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 51-345 |
| Cow position: | chr11:4460803-4461095 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 76 |
| Conread position: | 122-340 |
| Cow position: | chr11:33065646-33065434 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 1-141 |
| Cow position: | chr12:48470396-48470256 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 1-161 |
| Cow position: | chr12:46033351-46033188 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 1-285 |
| Cow position: | chr12:6686914-6686634 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 1-340 |
| Cow position: | chr12:2262715-2262379 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 1-340 |
| Cow position: | chr12:5720213-5719862 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 195 |
| Conread position: | 1-340 |
| Cow position: | chr12:6467051-6466718 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 4-335 |
| Cow position: | chr12:25049424-25049748 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 149-340 |
| Cow position: | chr12:48469974-48469791 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 210-420 |
| Cow position: | chr12:4197668-4197884 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 134 |
| Conread position: | 1-134 |
| Cow position: | chr13:55804170-55804039 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 1-200 |
| Cow position: | chr13:25287080-25286889 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 119 |
| Conread position: | 1-420 |
| Cow position: | chr13:52402230-52401821 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 49-420 |
| Cow position: | chr13:48543235-48542855 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 204-340 |
| Cow position: | chr13:55804029-55803895 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 72, 50 |
| Conread position: | 1-180 |
| Cow position: | chr14:12969165-12969343 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 1-316 |
| Cow position: | chr14:16521041-16521348 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 3-340 |
| Cow position: | chr14:12569769-12570082 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 7-340 |
| Cow position: | chr14:29706537-29706849 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 97-420 |
| Cow position: | chr14:36279136-36278829 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 150, 41 |
| Conread position: | 110-420 |
| Cow position: | chr14:26623432-26623130 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 1-255 |
| Cow position: | chr15:39248445-39248195 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 1-340 |
| Cow position: | chr15:42560245-42560586 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 1-347 |
| Cow position: | chr15:42612450-42612109 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 1-417 |
| Cow position: | chr15:24903369-24902953 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 9-172 |
| Cow position: | chr15:8438607-8438764 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 34-224 |
| Cow position: | chr15:31800649-31800459 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 34-226 |
| Cow position: | chr15:32355594-32355401 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 39-347 |
| Cow position: | chr15:16772718-16772407 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 216-332 |
| Cow position: | chr15:8439778-8439895 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 1-205 |
| Cow position: | chr16:27160561-27160359 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 1-284 |
| Cow position: | chr16:31694098-31693819 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 1-334 |
| Cow position: | chr16:48002988-48002657 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 1-347 |
| Cow position: | chr16:5698137-5697775 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 1-347 |
| Cow position: | chr16:43121623-43121282 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 1-420 |
| Cow position: | chr16:26918337-26917937 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 3-182 |
| Cow position: | chr16:51080328-51080518 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 15-226 |
| Cow position: | chr16:29771617-29771828 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 94-420 |
| Cow position: | chr16:5786385-5786079 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 182, 34 |
| Conread position: | 1-176 |
| Cow position: | chr17:21428140-21428315 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 1-251 |
| Cow position: | chr17:21977645-21977896 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 1-341 |
| Cow position: | chr17:4609332-4609677 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 1-420 |
| Cow position: | chr17:10400463-10400869 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 128 |
| Conread position: | 2-185 |
| Cow position: | chr17:4604338-4604528 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 8-351 |
| Cow position: | chr17:2767215-2766880 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 154-340 |
| Cow position: | chr17:21428722-21428906 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 204-420 |
| Cow position: | chr17:32385142-32384924 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 1-135 |
| Cow position: | chr18:15610949-15611084 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 1-339 |
| Cow position: | chr18:47119516-47119199 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 246, 43 |
| Conread position: | 5-419 |
| Cow position: | chr18:42462534-42462944 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 18-339 |
| Cow position: | chr18:50018443-50018145 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 54-420 |
| Cow position: | chr18:23622480-23622829 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 121-419 |
| Cow position: | chr18:49891980-49892282 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 126, 65 |
| Conread position: | 1-133 |
| Cow position: | chr19:20036170-20036301 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-298 |
| Cow position: | chr19:20083933-20084212 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 2-339 |
| Cow position: | chr19:3412303-3411951 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 126 |
| Conread position: | 4-420 |
| Cow position: | chr19:49866245-49865801 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 5-172 |
| Cow position: | chr19:52359721-52359555 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 38-340 |
| Cow position: | chr19:50785176-50785477 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 147-341 |
| Cow position: | chr19:45597392-45597198 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 156-340 |
| Cow position: | chr19:53748380-53748196 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 1-291 |
| Cow position: | chr20:27923937-27924210 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 1-420 |
| Cow position: | chr20:4001042-4001454 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 170 |
| Conread position: | 1-420 |
| Cow position: | chr20:41897608-41898014 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 298 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 9-297 |
| Cow position: | chr20:8498537-8498251 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 97-347 |
| Cow position: | chr20:33887315-33887565 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 217-420 |
| Cow position: | chr20:31731199-31731402 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 5-187 |
| Cow position: | chr21:37988060-37987878 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 54-347 |
| Cow position: | chr21:34043592-34043894 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 143, 73 |
| Conread position: | 1-169 |
| Cow position: | chr22:10259563-10259399 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 1-245 |
| Cow position: | chr22:27460181-27459937 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 1-324 |
| Cow position: | chr22:19577443-19577118 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 1-340 |
| Cow position: | chr22:12309584-12309902 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 1-420 |
| Cow position: | chr22:27388236-27388641 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 2-301 |
| Cow position: | chr22:41338075-41337781 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 20-347 |
| Cow position: | chr22:20060649-20060324 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 56-312 |
| Cow position: | chr22:25084249-25083998 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 187, 71 |
| Conread position: | 82-420 |
| Cow position: | chr22:22489829-22489487 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 155-341 |
| Cow position: | chr22:6179182-6179368 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 220-419 |
| Cow position: | chr22:10259377-10259172 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 120 |
| Conread position: | 1-225 |
| Cow position: | chr23:26204706-26204922 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 199, 60 |
| Conread position: | 1-347 |
| Cow position: | chr23:4569556-4569889 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 1-420 |
| Cow position: | chr23:18566247-18566658 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 1-420 |
| Cow position: | chr23:31610662-31611072 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 137 |
| Conread position: | 2-134 |
| Cow position: | chr23:9515051-9515183 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 118 |
| Conread position: | 2-189 |
| Cow position: | chr23:9617973-9617786 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 2-347 |
| Cow position: | chr23:26598605-26598950 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 1-261 |
| Cow position: | chr24:38024158-38023897 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 1-340 |
| Cow position: | chr24:6099745-6099420 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 1-347 |
| Cow position: | chr24:13307290-13306953 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 191 |
| Conread position: | 1-419 |
| Cow position: | chr24:6179471-6179869 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 2-339 |
| Cow position: | chr24:2931498-2931169 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 9-253 |
| Cow position: | chr24:2128492-2128733 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 1-419 |
| Cow position: | chr25:23565288-23564878 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 3-420 |
| Cow position: | chr25:2681299-2681712 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 5-347 |
| Cow position: | chr25:11381655-11381989 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 1-131 |
| Cow position: | chr26:29853507-29853374 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-347 |
| Cow position: | chr26:28425376-28425701 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 1-351 |
| Cow position: | chr26:26975665-26976000 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 83 |
| Conread position: | 1-420 |
| Cow position: | chr26:22774668-22774259 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 39-305 |
| Cow position: | chr26:6978491-6978221 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 94-368 |
| Cow position: | chr26:2413318-2413052 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 229-419 |
| Cow position: | chr26:29853191-29853003 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 1-340 |
| Cow position: | chr27:22442788-22443109 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 1-341 |
| Cow position: | chr27:15088828-15088478 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 91-347 |
| Cow position: | chr27:13310469-13310219 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 113-335 |
| Cow position: | chr27:23047837-23048061 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 160-420 |
| Cow position: | chr27:11381386-11381647 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 128, 50 |
| Conread position: | 1-182 |
| Cow position: | chr28:34754619-34754799 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 1-322 |
| Cow position: | chr28:9718084-9717766 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 1-420 |
| Cow position: | chr28:720054-719650 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 139 |
| Conread position: | 1-420 |
| Cow position: | chr28:34762072-34761660 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 188 |
| Conread position: | 2-347 |
| Cow position: | chr28:8020147-8019815 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 3-182 |
| Cow position: | chr28:5865855-5865674 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 6-291 |
| Cow position: | chr28:3719893-3719613 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 9-292 |
| Cow position: | chr28:26466203-26465927 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 206-379 |
| Cow position: | chr28:32226731-32226903 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 1-182 |
| Cow position: | chr29:4243927-4244110 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 104-347 |
| Cow position: | chr29:11395437-11395209 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 1-255 |
| Cow position: | chr6:27488375-27488129 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 1-313 |
| Cow position: | chr6:15638627-15638927 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 1-336 |
| Cow position: | chr6:50787132-50786787 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 197 |
| Conread position: | 1-338 |
| Cow position: | chr6:42716722-42716398 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 2-420 |
| Cow position: | chr6:50312433-50312021 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 3-161 |
| Cow position: | chr6:58697214-58697375 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 5-420 |
| Cow position: | chr6:43189171-43189578 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 38-340 |
| Cow position: | chr6:54339670-54339378 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 155-420 |
| Cow position: | chr6:58697612-58697880 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 1-255 |
| Cow position: | chr7:32471030-32470774 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 1-287 |
| Cow position: | chr7:22491123-22491411 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 1-323 |
| Cow position: | chr7:44189411-44189718 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 2-339 |
| Cow position: | chr7:65900994-65901340 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 4-176 |
| Cow position: | chr7:23418453-23418621 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 56-226 |
| Cow position: | chr7:26775538-26775371 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 80-420 |
| Cow position: | chr7:68427894-68428212 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 167, 101 |
| Conread position: | 195-347 |
| Cow position: | chr7:23418615-23418767 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 1-170 |
| Cow position: | chr8:53422686-53422520 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 1-294 |
| Cow position: | chr8:51943528-51943221 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 1-338 |
| Cow position: | chr8:40295661-40295992 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 80-338 |
| Cow position: | chr8:3108912-3109168 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 125-417 |
| Cow position: | chr8:10203094-10203387 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 162-420 |
| Cow position: | chr8:32341037-32341291 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 1-257 |
| Cow position: | chr9:39181168-39181435 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 1-347 |
| Cow position: | chr9:44404107-44404429 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 210-341 |
| Cow position: | chr9:39181530-39181662 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 1-285 |
| Cow position: | chrX:25951697-25951425 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 1-420 |
| Cow position: | chrX:34705443-34705839 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 2-340 |
| Cow position: | chrX:36875880-36875546 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 39, 75 |