Cow genome map
| Conread name: | Ss1.1-rche34_p7.5 |
| Conread position: | 334-590 |
| Cow position: | chr1:28525579-28525835 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 45 |
| Conread position: | 591-836 |
| Cow position: | chr1:28534440-28534685 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-75 |
| Cow position: | chr10:13728398-13728472 (view UCSC Genome Browser custom track) |
| Alignm length: | 75 |
| Alignm identity: | 72 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-75 |
| Cow position: | chr10:14756478-14756552 (view UCSC Genome Browser custom track) |
| Alignm length: | 75 |
| Alignm identity: | 73 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-200 |
| Cow position: | chr10:14756675-14756820 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 133 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 72-201 |
| Cow position: | chr10:13728834-13728962 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 123 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 194-335 |
| Cow position: | chr10:13729235-13729376 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 125 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 197-335 |
| Cow position: | chr10:14757091-14757229 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-592 |
| Cow position: | chr10:14757462-14757722 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-605 |
| Cow position: | chr10:13730928-13731198 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 591-838 |
| Cow position: | chr10:13731332-13731579 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 591-838 |
| Cow position: | chr10:14758321-14758568 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 833-1011 |
| Cow position: | chr10:14758709-14758887 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 833-1014 |
| Cow position: | chr10:13731720-13731901 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 978-1140 |
| Cow position: | chr10:14759657-14759819 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 142 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 1012-1140 |
| Cow position: | chr10:13732411-13732539 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-200 |
| Cow position: | chr13:46556368-46556241 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 333-592 |
| Cow position: | chr13:46555007-46554748 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 591-837 |
| Cow position: | chr13:46553646-46553400 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 833-1014 |
| Cow position: | chr13:46552747-46552566 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1140 |
| Cow position: | chr13:46552480-46552352 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-201 |
| Cow position: | chr19:22418880-22418752 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 97-200 |
| Cow position: | chr19:22711067-22710964 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 330-588 |
| Cow position: | chr19:22416021-22415763 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-587 |
| Cow position: | chr19:2451135-2450881 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-587 |
| Cow position: | chr19:22382734-22382480 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-587 |
| Cow position: | chr19:22482958-22482704 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-587 |
| Cow position: | chr19:22528566-22528312 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-588 |
| Cow position: | chr19:2425496-2425241 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-590 |
| Cow position: | chr19:22710659-22710402 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 591-836 |
| Cow position: | chr19:22710083-22709838 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 591-837 |
| Cow position: | chr19:22414038-22413792 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 591-848 |
| Cow position: | chr19:22381775-22381518 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 605-836 |
| Cow position: | chr19:2423383-2423152 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 605-836 |
| Cow position: | chr19:2448631-2448400 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 605-836 |
| Cow position: | chr19:22481032-22480801 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 605-848 |
| Cow position: | chr19:22527596-22527354 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 832-1010 |
| Cow position: | chr19:2448289-2448111 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 832-1011 |
| Cow position: | chr19:22381220-22381041 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 832-1011 |
| Cow position: | chr19:22527056-22526877 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 833-1011 |
| Cow position: | chr19:2423063-2422885 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 833-1011 |
| Cow position: | chr19:22480714-22480536 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 833-1014 |
| Cow position: | chr19:22709758-22709577 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1004-1139 |
| Cow position: | chr19:22480466-22480331 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1139 |
| Cow position: | chr19:2448029-2447902 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1140 |
| Cow position: | chr19:2422806-2422678 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1140 |
| Cow position: | chr19:22380828-22380700 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1140 |
| Cow position: | chr19:22526662-22526534 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1140 |
| Cow position: | chr19:22709472-22709344 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 59 |