Cow genome map


           Conread name:
           Ss1.1-rcki22_c23.5
        

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               125
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               125
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               129
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-147
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               33-146
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               136
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               140
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               127
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-152
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               126
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-146
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-146
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               128
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-146
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               122
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               129
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               125
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               128
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               127
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-145
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               126
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               132
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               128
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               128
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               124
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               126
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               129
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-146
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               133
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               134
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               128
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               133
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-146
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               127
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               129
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-383
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 230
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-146
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               128
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-146
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               126
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               129
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               136
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               137
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               136
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               137
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               129
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               133
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               132
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-145
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               128
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-146
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               129
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               127
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               128
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-146
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               65-146
               

               Cow position:
               
               

               Alignm length:
               82
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               133
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               134
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               132
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               126
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               123
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               129
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               125
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               130
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               124
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               130
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               126
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0