Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rdbla0108_i21.5
        

               Conread position:
               97-362
               

               Cow position:
               chr10:25479004-25479267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 160
               

               Conread position:
               99-347
               

               Cow position:
               chr10:15391394-15391652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               101-307
               

               Cow position:
               chr10:38429637-38429427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               103-324
               

               Cow position:
               chr10:11032584-11032359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               103-335
               

               Cow position:
               chr10:45606513-45606283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               103-361
               

               Cow position:
               chr10:66753149-66753421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               104-338
               

               Cow position:
               chr10:23404112-23404352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               105-346
               

               Cow position:
               chr10:20110030-20109790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               106-335
               

               Cow position:
               chr10:22479811-22479576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               111-354
               

               Cow position:
               chr10:11404219-11403970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               112-284
               

               Cow position:
               chr10:21424758-21424579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               112-319
               

               Cow position:
               chr10:15874157-15873942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               112-324
               

               Cow position:
               chr10:48255305-48255084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               112-324
               

               Cow position:
               chr10:51221146-51220937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 138
               

               Conread position:
               112-324
               

               Cow position:
               chr10:59153734-59153523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               112-335
               

               Cow position:
               chr10:10124262-10124494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-335
               

               Cow position:
               chr10:24786024-24786259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               22, 131
               

               Conread position:
               112-335
               

               Cow position:
               chr10:41984970-41984736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-339
               

               Cow position:
               chr10:58608028-58608257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               112-345
               

               Cow position:
               chr10:6012118-6011891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               112-348
               

               Cow position:
               chr10:8413132-8412890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               112-360
               

               Cow position:
               chr10:6038418-6038171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 107
               

               Conread position:
               112-387
               

               Cow position:
               chr10:49624683-49624967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               21, 249
               

               Conread position:
               115-322
               

               Cow position:
               chr10:2407210-2406995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               115-324
               

               Cow position:
               chr10:11497159-11497361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               115-346
               

               Cow position:
               chr10:23949000-23948757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               115-347
               

               Cow position:
               chr10:39081319-39081556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               115-410
               

               Cow position:
               chr10:62516802-62517106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               25, 234
               

               Conread position:
               117-347
               

               Cow position:
               chr10:42454052-42454282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               118-307
               

               Cow position:
               chr10:31368810-31368610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 180
               

               Conread position:
               130-329
               

               Cow position:
               chr10:9794720-9794518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               131-307
               

               Cow position:
               chr10:6490827-6490641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               131-338
               

               Cow position:
               chr10:50776646-50776859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               132-360
               

               Cow position:
               chr10:3115419-3115660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 157
               

               Conread position:
               132-397
               

               Cow position:
               chr10:9530044-9529783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               135-319
               

               Cow position:
               chr10:31250790-31250606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               137-358
               

               Cow position:
               chr10:68251761-68251985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               138-332
               

               Cow position:
               chr10:53762171-53761970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               138-339
               

               Cow position:
               chr10:34167833-34168027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               140-335
               

               Cow position:
               chr10:29689385-29689182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 149
               

               Conread position:
               141-370
               

               Cow position:
               chr10:52244700-52244460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               143-352
               

               Cow position:
               chr10:907912-908118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               151-307
               

               Cow position:
               chr10:30753144-30753296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               159-312
               

               Cow position:
               chr10:6921690-6921846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               160-335
               

               Cow position:
               chr10:20952113-20952281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               191-310
               

               Cow position:
               chr10:2267039-2266921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               191-338
               

               Cow position:
               chr10:52889228-52889084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               191-340
               

               Cow position:
               chr10:45299818-45299963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               196-319
               

               Cow position:
               chr10:61426723-61426600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-315
               

               Cow position:
               chr11:84795879-84795612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               77-335
               

               Cow position:
               chr11:9055852-9056114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               95-299
               

               Cow position:
               chr11:56892725-56892939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 177
               

               Conread position:
               99-299
               

               Cow position:
               chr11:60137607-60137811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               106-315
               

               Cow position:
               chr11:24967374-24967579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               106-324
               

               Cow position:
               chr11:47566020-47565791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               106-338
               

               Cow position:
               chr11:11752598-11752356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               106-358
               

               Cow position:
               chr11:4609913-4609669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               110-291
               

               Cow position:
               chr11:2908693-2908879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               110-334
               

               Cow position:
               chr11:27681422-27681657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               111-345
               

               Cow position:
               chr11:19238232-19238000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               112-307
               

               Cow position:
               chr11:66401626-66401819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               112-335
               

               Cow position:
               chr11:19259590-19259355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               112-335
               

               Cow position:
               chr11:34946148-34945914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               112-335
               

               Cow position:
               chr11:51745280-51745500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               112-337
               

               Cow position:
               chr11:50951479-50951714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               112-338
               

               Cow position:
               chr11:11460416-11460632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               112-348
               

               Cow position:
               chr11:78543860-78544100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 195
               

               Conread position:
               112-359
               

               Cow position:
               chr11:42519664-42519913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               112-360
               

               Cow position:
               chr11:16000852-16001105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               112-361
               

               Cow position:
               chr11:45889889-45890143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               112-380
               

               Cow position:
               chr11:9874244-9874515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               115-322
               

               Cow position:
               chr11:31894202-31894416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               115-333
               

               Cow position:
               chr11:48983051-48983269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               115-335
               

               Cow position:
               chr11:52832789-52832569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               115-382
               

               Cow position:
               chr11:63508354-63508616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               116-299
               

               Cow position:
               chr11:81518246-81518055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               116-324
               

               Cow position:
               chr11:53452419-53452203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               116-329
               

               Cow position:
               chr11:7683893-7684108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               124-338
               

               Cow position:
               chr11:17151614-17151831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               127-363
               

               Cow position:
               chr11:5648683-5648924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               131-299
               

               Cow position:
               chr11:72082651-72082825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               131-324
               

               Cow position:
               chr11:46705594-46705393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 53
               

               Conread position:
               131-335
               

               Cow position:
               chr11:8828685-8828475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               131-335
               

               Cow position:
               chr11:11785275-11785490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               131-335
               

               Cow position:
               chr11:32439009-32438795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 131
               

               Conread position:
               131-337
               

               Cow position:
               chr11:7001989-7001770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               131-343
               

               Cow position:
               chr11:12950001-12949784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               132-307
               

               Cow position:
               chr11:39808938-39809117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               132-386
               

               Cow position:
               chr11:50937801-50937534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               134-311
               

               Cow position:
               chr11:65988173-65988357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               136-324
               

               Cow position:
               chr11:47193462-47193660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               139-352
               

               Cow position:
               chr11:19269130-19268916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               140-347
               

               Cow position:
               chr11:29802634-29802425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               141-320
               

               Cow position:
               chr11:73499235-73499060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               141-324
               

               Cow position:
               chr11:17452192-17452380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               141-352
               

               Cow position:
               chr11:70399806-70400015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               142-376
               

               Cow position:
               chr11:40275645-40275408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               142-376
               

               Cow position:
               chr11:40279137-40278900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               144-311
               

               Cow position:
               chr11:13039214-13039047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               149-347
               

               Cow position:
               chr11:14046114-14045910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               154-388
               

               Cow position:
               chr11:34642263-34642024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 177
               

               Conread position:
               155-324
               

               Cow position:
               chr11:19606286-19606458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               186-358
               

               Cow position:
               chr11:54057999-54058170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               191-319
               

               Cow position:
               chr11:373131-373003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-324
               

               Cow position:
               chr11:46700024-46700155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               191-344
               

               Cow position:
               chr11:75255418-75255566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               191-360
               

               Cow position:
               chr11:5188142-5188308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               192-335
               

               Cow position:
               chr11:34136516-34136659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               193-335
               

               Cow position:
               chr11:6729683-6729825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               197-365
               

               Cow position:
               chr11:7333092-7332921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               201-322
               

               Cow position:
               chr11:76007403-76007523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 6
               

               Conread position:
               206-335
               

               Cow position:
               chr11:76851808-76851680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               93-338
               

               Cow position:
               chr12:5658863-5658607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               98-319
               

               Cow position:
               chr12:31528960-31528735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               103-355
               

               Cow position:
               chr12:7996309-7996567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               106-344
               

               Cow position:
               chr12:48425610-48425855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               109-357
               

               Cow position:
               chr12:4582846-4583100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               112-309
               

               Cow position:
               chr12:21828991-21829183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr12:17109986-17109770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               112-337
               

               Cow position:
               chr12:1223439-1223210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 170
               

               Conread position:
               112-358
               

               Cow position:
               chr12:18769169-18768913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 206
               

               Conread position:
               115-341
               

               Cow position:
               chr12:40716134-40715906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               119-379
               

               Cow position:
               chr12:25312460-25312191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 136
               

               Conread position:
               124-335
               

               Cow position:
               chr12:30064858-30065069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               125-360
               

               Cow position:
               chr12:18966834-18966594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               131-338
               

               Cow position:
               chr12:41642353-41642571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 126
               

               Conread position:
               132-307
               

               Cow position:
               chr12:14325341-14325164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               135-310
               

               Cow position:
               chr12:5797630-5797453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               141-316
               

               Cow position:
               chr12:44057455-44057631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               144-347
               

               Cow position:
               chr12:18093831-18094038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               146-335
               

               Cow position:
               chr12:7645864-7645674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               151-324
               

               Cow position:
               chr12:25933627-25933808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               154-316
               

               Cow position:
               chr12:5497875-5497709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 119
               

               Conread position:
               155-357
               

               Cow position:
               chr12:29691245-29691041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 181
               

               Conread position:
               156-324
               

               Cow position:
               chr12:45541659-45541831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               6, 158
               

               Conread position:
               191-324
               

               Cow position:
               chr12:28017038-28017171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               193-324
               

               Cow position:
               chr12:36109268-36109136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               99-332
               

               Cow position:
               chr13:38898188-38898432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               103-324
               

               Cow position:
               chr13:20180466-20180237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               105-346
               

               Cow position:
               chr13:32167265-32167511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               110-355
               

               Cow position:
               chr13:22886951-22887199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               112-291
               

               Cow position:
               chr13:3016136-3016319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               112-291
               

               Cow position:
               chr13:33954987-33955171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               112-299
               

               Cow position:
               chr13:35719096-35719291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr13:58348124-58347907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               112-332
               

               Cow position:
               chr13:14717293-14717525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 175
               

               Conread position:
               112-338
               

               Cow position:
               chr13:661599-661829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               112-348
               

               Cow position:
               chr13:46430260-46430506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               112-352
               

               Cow position:
               chr13:9803112-9802862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 200
               

               Conread position:
               112-358
               

               Cow position:
               chr13:46284572-46284820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               112-358
               

               Cow position:
               chr13:49200679-49200430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               112-384
               

               Cow position:
               chr13:37558324-37558046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               112-440
               

               Cow position:
               chr13:50739208-50738884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               115-281
               

               Cow position:
               chr13:54080772-54080950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               115-324
               

               Cow position:
               chr13:33282045-33281827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               115-365
               

               Cow position:
               chr13:34761719-34761465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 135
               

               Conread position:
               116-312
               

               Cow position:
               chr13:9125706-9125504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               116-324
               

               Cow position:
               chr13:18761693-18761907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               116-347
               

               Cow position:
               chr13:22075711-22075469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               117-315
               

               Cow position:
               chr13:33347165-33346966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               125-306
               

               Cow position:
               chr13:7010495-7010312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               130-359
               

               Cow position:
               chr13:58620925-58621156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               131-335
               

               Cow position:
               chr13:32657403-32657181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               132-351
               

               Cow position:
               chr13:15090888-15091111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               132-354
               

               Cow position:
               chr13:12745694-12745467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               132-360
               

               Cow position:
               chr13:30271341-30271110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               132-363
               

               Cow position:
               chr13:26522928-26523154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               133-307
               

               Cow position:
               chr13:11834457-11834639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               133-312
               

               Cow position:
               chr13:16327684-16327504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               133-324
               

               Cow position:
               chr13:20156507-20156308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               133-324
               

               Cow position:
               chr13:54969781-54969984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               133-329
               

               Cow position:
               chr13:30510077-30509882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               133-339
               

               Cow position:
               chr13:12521758-12521972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               133-346
               

               Cow position:
               chr13:43167011-43167232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               140-362
               

               Cow position:
               chr13:17796381-17796150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               141-304
               

               Cow position:
               chr13:14099103-14099271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               141-346
               

               Cow position:
               chr13:54814901-54815114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               142-346
               

               Cow position:
               chr13:43155843-43156056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               142-360
               

               Cow position:
               chr13:32904790-32904566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               143-324
               

               Cow position:
               chr13:18551012-18550826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               146-324
               

               Cow position:
               chr13:29820199-29820385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 5
               

               Conread position:
               146-347
               

               Cow position:
               chr13:26508488-26508285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 174
               

               Conread position:
               161-307
               

               Cow position:
               chr13:22082379-22082228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               166-357
               

               Cow position:
               chr13:17991643-17991447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               177-321
               

               Cow position:
               chr13:26507901-26507759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               191-312
               

               Cow position:
               chr13:25058109-25057988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-346
               

               Cow position:
               chr13:6927257-6927106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               191-354
               

               Cow position:
               chr13:34191760-34191922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               191-357
               

               Cow position:
               chr13:33161041-33161205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               191-362
               

               Cow position:
               chr13:58615142-58614973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               191-381
               

               Cow position:
               chr13:37435272-37435088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               196-333
               

               Cow position:
               chr13:34689881-34689744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               197-324
               

               Cow position:
               chr13:13296112-13296235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               199-338
               

               Cow position:
               chr13:53858115-53858254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-357
               

               Cow position:
               chr14:23008338-23008035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               77-338
               

               Cow position:
               chr14:8488319-8488061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               99-321
               

               Cow position:
               chr14:33553297-33553079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               100-288
               

               Cow position:
               chr14:22657353-22657164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               100-354
               

               Cow position:
               chr14:6984852-6985104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               101-381
               

               Cow position:
               chr14:2189745-2189458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               103-335
               

               Cow position:
               chr14:37678894-37679135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               105-335
               

               Cow position:
               chr14:35700532-35700296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               106-324
               

               Cow position:
               chr14:21018217-21017994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               110-288
               

               Cow position:
               chr14:46962636-46962465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr14:27104181-27103963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               112-361
               

               Cow position:
               chr14:21691173-21691430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               116-356
               

               Cow position:
               chr14:7582356-7582596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 165
               

               Conread position:
               131-335
               

               Cow position:
               chr14:28605314-28605100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               131-339
               

               Cow position:
               chr14:21084423-21084204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 211
               

               Conread position:
               131-339
               

               Cow position:
               chr14:26108715-26108497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 169
               

               Conread position:
               131-347
               

               Cow position:
               chr14:20865237-20865453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 72
               

               Conread position:
               132-332
               

               Cow position:
               chr14:47974059-47973855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               132-347
               

               Cow position:
               chr14:7813493-7813709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 125
               

               Conread position:
               132-386
               

               Cow position:
               chr14:47604220-47604477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               64, 183
               

               Conread position:
               133-319
               

               Cow position:
               chr14:28565545-28565359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               133-324
               

               Cow position:
               chr14:6441986-6441786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               136-331
               

               Cow position:
               chr14:21369439-21369240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 81
               

               Conread position:
               138-324
               

               Cow position:
               chr14:43031869-43031675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               141-324
               

               Cow position:
               chr14:47138721-47138909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               141-335
               

               Cow position:
               chr14:43565820-43566011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               142-311
               

               Cow position:
               chr14:26960349-26960525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               143-335
               

               Cow position:
               chr14:19022831-19023029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               145-280
               

               Cow position:
               chr14:31399659-31399518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               168-347
               

               Cow position:
               chr14:26153226-26153413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               171-318
               

               Cow position:
               chr14:37624733-37624885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               191-372
               

               Cow position:
               chr14:8517977-8518153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               176, 83
               

               Conread position:
               192-335
               

               Cow position:
               chr14:5677370-5677231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               78-339
               

               Cow position:
               chr15:23109103-23109373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               119, 184
               

               Conread position:
               102-341
               

               Cow position:
               chr15:24864111-24864355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               103-347
               

               Cow position:
               chr15:8937164-8936940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               105-335
               

               Cow position:
               chr15:6749695-6749931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               105-335
               

               Cow position:
               chr15:19725567-19725795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               105-356
               

               Cow position:
               chr15:24411566-24411313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               97, 6
               

               Conread position:
               106-360
               

               Cow position:
               chr15:15215171-15214905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               107-324
               

               Cow position:
               chr15:21836832-21836614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               110-307
               

               Cow position:
               chr15:3572554-3572757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               111-335
               

               Cow position:
               chr15:12163371-12163605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               111-335
               

               Cow position:
               chr15:24977031-24977259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               111-338
               

               Cow position:
               chr15:8022199-8021967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               112-285
               

               Cow position:
               chr15:36839027-36839209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-312
               

               Cow position:
               chr15:19812796-19812596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               112-346
               

               Cow position:
               chr15:35967343-35967581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               112-368
               

               Cow position:
               chr15:22886696-22886438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               112-412
               

               Cow position:
               chr15:47821522-47821214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               115-307
               

               Cow position:
               chr15:22854547-22854351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               115-346
               

               Cow position:
               chr15:27863181-27863423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               116-306
               

               Cow position:
               chr15:26421457-26421656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               116-316
               

               Cow position:
               chr15:9178066-9178267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               125-272
               

               Cow position:
               chr15:46005517-46005671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               127-324
               

               Cow position:
               chr15:11957669-11957464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               130-346
               

               Cow position:
               chr15:26933820-26934045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               131-335
               

               Cow position:
               chr15:17788232-17788025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               131-338
               

               Cow position:
               chr15:34255600-34255807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 118
               

               Conread position:
               131-354
               

               Cow position:
               chr15:50561271-50561505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               132-324
               

               Cow position:
               chr15:31616880-31617081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               134-278
               

               Cow position:
               chr15:31182552-31182403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               141-307
               

               Cow position:
               chr15:10698454-10698609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               141-324
               

               Cow position:
               chr15:10303340-10303147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               141-338
               

               Cow position:
               chr15:39200894-39200695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               147-279
               

               Cow position:
               chr15:23140021-23140154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 109
               

               Conread position:
               150-310
               

               Cow position:
               chr15:34037082-34037252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               154-335
               

               Cow position:
               chr15:10569005-10569191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               44, 155
               

               Conread position:
               161-378
               

               Cow position:
               chr15:4216049-4216272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               162-360
               

               Cow position:
               chr15:23547897-23548095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               35, 149
               

               Conread position:
               175-359
               

               Cow position:
               chr15:10189442-10189255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               191-339
               

               Cow position:
               chr15:37918704-37918556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-362
               

               Cow position:
               chr15:2117941-2117774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               97-324
               

               Cow position:
               chr16:43082305-43082077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               103-354
               

               Cow position:
               chr16:54515659-54515913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               103-362
               

               Cow position:
               chr16:18427121-18427380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               104-312
               

               Cow position:
               chr16:4499371-4499576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               104-420
               

               Cow position:
               chr16:16946603-16946270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               106-291
               

               Cow position:
               chr16:19976913-19977095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 10
               

               Conread position:
               106-310
               

               Cow position:
               chr16:10303810-10303600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               106-324
               

               Cow position:
               chr16:28827241-28827013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               108-284
               

               Cow position:
               chr16:56104975-56104789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 154
               

               Conread position:
               110-347
               

               Cow position:
               chr16:18557322-18557076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               112-292
               

               Cow position:
               chr16:44898808-44898623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 138
               

               Conread position:
               112-322
               

               Cow position:
               chr16:15938585-15938369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               112-323
               

               Cow position:
               chr16:19003147-19002928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr16:26156194-26155978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               112-346
               

               Cow position:
               chr16:38620900-38621141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               115-358
               

               Cow position:
               chr16:1440383-1440625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               116-335
               

               Cow position:
               chr16:30639282-30639500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               117-300
               

               Cow position:
               chr16:47368707-47368898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               130-324
               

               Cow position:
               chr16:47909381-47909178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               131-298
               

               Cow position:
               chr16:5333625-5333456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               131-329
               

               Cow position:
               chr16:23066623-23066824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               131-336
               

               Cow position:
               chr16:42312348-42312560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               132-335
               

               Cow position:
               chr16:45693112-45693318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               135-366
               

               Cow position:
               chr16:33121577-33121810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               143-348
               

               Cow position:
               chr16:2619004-2618799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               155-310
               

               Cow position:
               chr16:28267036-28266882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               162-340
               

               Cow position:
               chr16:31490313-31490495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               171-362
               

               Cow position:
               chr16:29094875-29095059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 29
               

               Conread position:
               175-333
               

               Cow position:
               chr16:9407868-9407705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               186-410
               

               Cow position:
               chr16:31222564-31222778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               191-312
               

               Cow position:
               chr16:23978402-23978281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-353
               

               Cow position:
               chr16:228464-228305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               195-346
               

               Cow position:
               chr16:4708866-4708715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               197-331
               

               Cow position:
               chr16:52565457-52565590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               199-346
               

               Cow position:
               chr16:49122226-49122080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               70-324
               

               Cow position:
               chr17:24880682-24880944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 48
               

               Conread position:
               76-347
               

               Cow position:
               chr17:23147368-23147645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               103-335
               

               Cow position:
               chr17:38139481-38139723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               104-348
               

               Cow position:
               chr17:3042450-3042704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               105-305
               

               Cow position:
               chr17:19891598-19891809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               106-299
               

               Cow position:
               chr17:10271474-10271670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               106-362
               

               Cow position:
               chr17:32457590-32457331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               110-352
               

               Cow position:
               chr17:39012708-39012953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               111-298
               

               Cow position:
               chr17:8926232-8926039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               111-378
               

               Cow position:
               chr17:20216149-20216421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               27, 233
               

               Conread position:
               112-276
               

               Cow position:
               chr17:10308044-10307877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               112-285
               

               Cow position:
               chr17:25707940-25708121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               112-324
               

               Cow position:
               chr17:27257248-27257014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr17:35212350-35212560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               112-324
               

               Cow position:
               chr17:36217198-36216982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               112-325
               

               Cow position:
               chr17:1455956-1455739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 148
               

               Conread position:
               112-335
               

               Cow position:
               chr17:33903938-33903709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               112-365
               

               Cow position:
               chr17:8832142-8831898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               115-338
               

               Cow position:
               chr17:37778633-37778417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               116-354
               

               Cow position:
               chr17:18173833-18173597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               117-335
               

               Cow position:
               chr17:31798463-31798234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               123-303
               

               Cow position:
               chr17:10790304-10790478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               126-324
               

               Cow position:
               chr17:144179-143976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               131-339
               

               Cow position:
               chr17:13229379-13229596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               131-342
               

               Cow position:
               chr17:37138763-37138975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               131-355
               

               Cow position:
               chr17:2271000-2271231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 151
               

               Conread position:
               131-360
               

               Cow position:
               chr17:6570136-6569910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               131-374
               

               Cow position:
               chr17:9748748-9748999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 194
               

               Conread position:
               135-347
               

               Cow position:
               chr17:33386427-33386648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 146
               

               Conread position:
               141-307
               

               Cow position:
               chr17:7595168-7595337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               141-347
               

               Cow position:
               chr17:30236210-30236418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               143-335
               

               Cow position:
               chr17:14278077-14278278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               144-331
               

               Cow position:
               chr17:23318300-23318111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               154-335
               

               Cow position:
               chr17:15922867-15923052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 125
               

               Conread position:
               183-363
               

               Cow position:
               chr17:42775206-42775025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               191-309
               

               Cow position:
               chr17:23879455-23879337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-314
               

               Cow position:
               chr17:27781137-27781260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-318
               

               Cow position:
               chr17:33930230-33930357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               191-335
               

               Cow position:
               chr17:8093918-8094056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               196-362
               

               Cow position:
               chr17:7861626-7861460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               197-322
               

               Cow position:
               chr17:11826380-11826255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-354
               

               Cow position:
               chr17:37342193-37342060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               70-311
               

               Cow position:
               chr18:10101356-10101605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               86-347
               

               Cow position:
               chr18:38126568-38126296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               108-310
               

               Cow position:
               chr18:16448462-16448660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               110-287
               

               Cow position:
               chr18:34325044-34324861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               110-335
               

               Cow position:
               chr18:35797533-35797752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               110-347
               

               Cow position:
               chr18:37331618-37331376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               112-310
               

               Cow position:
               chr18:15831683-15831481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               112-316
               

               Cow position:
               chr18:16726558-16726774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               112-338
               

               Cow position:
               chr18:11362161-11362394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               129-278
               

               Cow position:
               chr18:19850792-19850641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 5
               

               Conread position:
               131-299
               

               Cow position:
               chr18:23424849-23425024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               132-346
               

               Cow position:
               chr18:5755910-5756131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               133-363
               

               Cow position:
               chr18:55697088-55696858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               141-299
               

               Cow position:
               chr18:33275235-33275395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 81
               

               Conread position:
               141-338
               

               Cow position:
               chr18:35767114-35767313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               141-347
               

               Cow position:
               chr18:33843147-33842931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               142-386
               

               Cow position:
               chr18:43711988-43712234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               150-318
               

               Cow position:
               chr18:26372868-26373045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               151-354
               

               Cow position:
               chr18:48458623-48458830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 165
               

               Conread position:
               154-331
               

               Cow position:
               chr18:30566603-30566421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               190-324
               

               Cow position:
               chr18:35607922-35608056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-312
               

               Cow position:
               chr18:21095106-21094986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               192-323
               

               Cow position:
               chr18:7409303-7409174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               193-360
               

               Cow position:
               chr18:28794837-28795000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               63-323
               

               Cow position:
               chr19:54225425-54225160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               74-322
               

               Cow position:
               chr19:7839153-7838898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 179
               

               Conread position:
               99-324
               

               Cow position:
               chr19:7029836-7030070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               104-345
               

               Cow position:
               chr19:27346726-27346490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               110-338
               

               Cow position:
               chr19:25271485-25271252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               110-363
               

               Cow position:
               chr19:15936767-15937021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               110-374
               

               Cow position:
               chr19:48478909-48479177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               111-319
               

               Cow position:
               chr19:31827028-31827237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               111-323
               

               Cow position:
               chr19:11876773-11876551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               112-281
               

               Cow position:
               chr19:19661977-19662154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-314
               

               Cow position:
               chr19:33260962-33261164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               112-320
               

               Cow position:
               chr19:6735298-6735076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-322
               

               Cow position:
               chr19:904909-905116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               112-324
               

               Cow position:
               chr19:21285143-21284928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               112-324
               

               Cow position:
               chr19:55236420-55236638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               112-335
               

               Cow position:
               chr19:2342413-2342640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 158
               

               Conread position:
               112-335
               

               Cow position:
               chr19:36976982-36976748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               112-338
               

               Cow position:
               chr19:36461600-36461361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               117-335
               

               Cow position:
               chr19:952629-952852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               117-335
               

               Cow position:
               chr19:2771076-2770854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               118-391
               

               Cow position:
               chr19:38871003-38871285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               130-314
               

               Cow position:
               chr19:30935821-30935632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               67, 121
               

               Conread position:
               131-324
               

               Cow position:
               chr19:53738287-53738486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               131-339
               

               Cow position:
               chr19:43727089-43727300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               135-325
               

               Cow position:
               chr19:24689240-24689431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 176
               

               Conread position:
               141-324
               

               Cow position:
               chr19:11636976-11636793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               141-335
               

               Cow position:
               chr19:31126759-31126961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               144-381
               

               Cow position:
               chr19:28842397-28842149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               159-348
               

               Cow position:
               chr19:2280661-2280470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 95
               

               Conread position:
               161-403
               

               Cow position:
               chr19:31381021-31380781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               191-295
               

               Cow position:
               chr19:46306318-46306214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-324
               

               Cow position:
               chr19:11759210-11759076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               191-353
               

               Cow position:
               chr19:11147602-11147443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               191-367
               

               Cow position:
               chr19:38025712-38025892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               200-338
               

               Cow position:
               chr19:41459224-41459362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-276
               

               Cow position:
               chr20:29308523-29308353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               103-324
               

               Cow position:
               chr20:32667952-32668175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               106-335
               

               Cow position:
               chr20:25686370-25686130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               110-312
               

               Cow position:
               chr20:24234139-24234341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               110-331
               

               Cow position:
               chr20:17397274-17397051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               111-307
               

               Cow position:
               chr20:25274305-25274103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               112-311
               

               Cow position:
               chr20:17670167-17670376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 173
               

               Conread position:
               112-311
               

               Cow position:
               chr20:38858434-38858242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 39
               

               Conread position:
               112-324
               

               Cow position:
               chr20:20359799-20359577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               112-331
               

               Cow position:
               chr20:30855768-30855546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               115-319
               

               Cow position:
               chr20:14679609-14679818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               115-331
               

               Cow position:
               chr20:19865242-19865462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               116-306
               

               Cow position:
               chr20:14363148-14362959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               116-307
               

               Cow position:
               chr20:27001382-27001575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               119-360
               

               Cow position:
               chr20:23235028-23235272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               125-324
               

               Cow position:
               chr20:5763294-5763088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               130-323
               

               Cow position:
               chr20:39656254-39656448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               131-272
               

               Cow position:
               chr20:34178466-34178323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               132-305
               

               Cow position:
               chr20:23163896-23163715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               132-322
               

               Cow position:
               chr20:13609058-13608866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               132-324
               

               Cow position:
               chr20:4934064-4933864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               135-340
               

               Cow position:
               chr20:220625-220831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               138-348
               

               Cow position:
               chr20:7386571-7386781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 118
               

               Conread position:
               139-335
               

               Cow position:
               chr20:35924767-35924570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               141-355
               

               Cow position:
               chr20:40355147-40355358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               167-310
               

               Cow position:
               chr20:33962783-33962927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               172-322
               

               Cow position:
               chr20:32587408-32587560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               191-324
               

               Cow position:
               chr20:6105080-6104946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               191-348
               

               Cow position:
               chr20:8261989-8262144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               193-311
               

               Cow position:
               chr20:23604659-23604541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               193-335
               

               Cow position:
               chr20:14471496-14471349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               98-377
               

               Cow position:
               chr21:31004675-31004397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               100-357
               

               Cow position:
               chr21:11676056-11675793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               101-347
               

               Cow position:
               chr21:34739839-34740095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               111-335
               

               Cow position:
               chr21:39509384-39509151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 161
               

               Conread position:
               112-327
               

               Cow position:
               chr21:35997180-35997402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               112-346
               

               Cow position:
               chr21:31576501-31576737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               112-346
               

               Cow position:
               chr21:31662009-31662248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 206
               

               Conread position:
               112-359
               

               Cow position:
               chr21:25286520-25286772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               31, 140
               

               Conread position:
               112-372
               

               Cow position:
               chr21:9353450-9353724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 231
               

               Conread position:
               112-380
               

               Cow position:
               chr21:23397842-23397568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               115-322
               

               Cow position:
               chr21:18941827-18941609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               115-335
               

               Cow position:
               chr21:15239292-15239515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               82, 196
               

               Conread position:
               116-335
               

               Cow position:
               chr21:36371496-36371719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 165
               

               Conread position:
               116-362
               

               Cow position:
               chr21:34565202-34564956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               118-335
               

               Cow position:
               chr21:33947240-33947017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               141-324
               

               Cow position:
               chr21:19860131-19859943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               141-345
               

               Cow position:
               chr21:4723517-4723729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               146-345
               

               Cow position:
               chr21:13418190-13417991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 165
               

               Conread position:
               155-338
               

               Cow position:
               chr21:27480498-27480685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               38, 155
               

               Conread position:
               171-335
               

               Cow position:
               chr21:17807068-17806901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 140
               

               Conread position:
               190-354
               

               Cow position:
               chr21:23974182-23974018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               71, 63
               

               Conread position:
               191-324
               

               Cow position:
               chr21:30150147-30150016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               191-352
               

               Cow position:
               chr21:37121117-37120958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               191-359
               

               Cow position:
               chr21:23397572-23397401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               101-394
               

               Cow position:
               chr22:15424069-15424362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               104-335
               

               Cow position:
               chr22:23580909-23580674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               106-324
               

               Cow position:
               chr22:9466545-9466769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               106-353
               

               Cow position:
               chr22:43262390-43262637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               110-303
               

               Cow position:
               chr22:14118917-14119116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               110-307
               

               Cow position:
               chr22:19040428-19040223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               111-300
               

               Cow position:
               chr22:13274420-13274617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr22:13057757-13057546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               112-324
               

               Cow position:
               chr22:18486987-18486769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               112-347
               

               Cow position:
               chr22:13187818-13188062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 205
               

               Conread position:
               112-359
               

               Cow position:
               chr22:34675460-34675715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               115-319
               

               Cow position:
               chr22:32221586-32221789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               115-340
               

               Cow position:
               chr22:33386565-33386334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 204
               

               Conread position:
               116-324
               

               Cow position:
               chr22:45355322-45355537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               131-310
               

               Cow position:
               chr22:22997437-22997623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               131-347
               

               Cow position:
               chr22:17780767-17780547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               58, 40
               

               Conread position:
               133-348
               

               Cow position:
               chr22:22999553-22999773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               135-335
               

               Cow position:
               chr22:29868644-29868442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 177
               

               Conread position:
               140-350
               

               Cow position:
               chr22:31192604-31192391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               140-378
               

               Cow position:
               chr22:45291291-45291534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               141-352
               

               Cow position:
               chr22:15358215-15358432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 9
               

               Conread position:
               156-361
               

               Cow position:
               chr22:13235507-13235720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               168-348
               

               Cow position:
               chr22:32690439-32690256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               168-360
               

               Cow position:
               chr22:6859234-6859044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 159
               

               Conread position:
               186-337
               

               Cow position:
               chr22:30520920-30521069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               190-360
               

               Cow position:
               chr22:23751154-23750987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               191-354
               

               Cow position:
               chr22:37554486-37554326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               95-324
               

               Cow position:
               chr23:16058522-16058748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               105-310
               

               Cow position:
               chr23:11434321-11434109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               110-338
               

               Cow position:
               chr23:20585755-20585521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               110-367
               

               Cow position:
               chr23:14126511-14126772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               112-280
               

               Cow position:
               chr23:29393380-29393554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               112-338
               

               Cow position:
               chr23:23192206-23191984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               112-339
               

               Cow position:
               chr23:21276078-21275838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               112-346
               

               Cow position:
               chr23:16793529-16793768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               32, 201
               

               Conread position:
               115-347
               

               Cow position:
               chr23:7611216-7611448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               82, 112
               

               Conread position:
               116-324
               

               Cow position:
               chr23:28895009-28894789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               117-338
               

               Cow position:
               chr23:36082530-36082765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               124-331
               

               Cow position:
               chr23:17092538-17092320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               125-304
               

               Cow position:
               chr23:26217524-26217706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               127-335
               

               Cow position:
               chr23:1717591-1717372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               130-382
               

               Cow position:
               chr23:13359788-13360051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               138-347
               

               Cow position:
               chr23:9812250-9812049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               140-348
               

               Cow position:
               chr23:22660609-22660399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 109
               

               Conread position:
               140-381
               

               Cow position:
               chr23:4956002-4956243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               143-361
               

               Cow position:
               chr23:40651496-40651269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               146-288
               

               Cow position:
               chr23:13319924-13320067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               157-357
               

               Cow position:
               chr23:11564381-11564182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 5
               

               Conread position:
               191-335
               

               Cow position:
               chr23:19981652-19981507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               191-346
               

               Cow position:
               chr23:28721202-28721050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               196-324
               

               Cow position:
               chr23:1550915-1551043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-358
               

               Cow position:
               chr23:18967839-18967687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               118, 127
               

               Conread position:
               99-353
               

               Cow position:
               chr24:6507865-6507602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               101-335
               

               Cow position:
               chr24:32758851-32758612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               103-359
               

               Cow position:
               chr24:40091663-40091398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 8
               

               Conread position:
               105-339
               

               Cow position:
               chr24:31258423-31258186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               106-323
               

               Cow position:
               chr24:31378669-31378886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               106-335
               

               Cow position:
               chr24:17981103-17981335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               111-307
               

               Cow position:
               chr24:39681771-39681972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               111-347
               

               Cow position:
               chr24:19754491-19754740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               112-299
               

               Cow position:
               chr24:11201726-11201533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               112-306
               

               Cow position:
               chr24:19611928-19612128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 113
               

               Conread position:
               112-316
               

               Cow position:
               chr24:27633325-27633530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 130
               

               Conread position:
               112-318
               

               Cow position:
               chr24:25677956-25678157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               112-338
               

               Cow position:
               chr24:34369089-34368854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               112-346
               

               Cow position:
               chr24:30860555-30860795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               116-324
               

               Cow position:
               chr24:28335637-28335424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               116-335
               

               Cow position:
               chr24:32158353-32158125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               116-347
               

               Cow position:
               chr24:40809441-40809205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               131-311
               

               Cow position:
               chr24:35827673-35827863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 146
               

               Conread position:
               132-386
               

               Cow position:
               chr24:1271943-1271679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               141-335
               

               Cow position:
               chr24:28279573-28279773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 9
               

               Conread position:
               170-349
               

               Cow position:
               chr24:36497755-36497573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               184-339
               

               Cow position:
               chr24:15909620-15909775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               191-319
               

               Cow position:
               chr24:41332577-41332449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-324
               

               Cow position:
               chr24:5849365-5849237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-319
               

               Cow position:
               chr25:20811445-20811219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               106-367
               

               Cow position:
               chr25:26240473-26240737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               110-360
               

               Cow position:
               chr25:22575581-22575336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 7
               

               Conread position:
               111-346
               

               Cow position:
               chr25:33245860-33246096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               112-365
               

               Cow position:
               chr25:24405795-24405531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               115-342
               

               Cow position:
               chr25:20624991-20624758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 175
               

               Conread position:
               130-334
               

               Cow position:
               chr25:20614698-20614894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               131-347
               

               Cow position:
               chr25:23410624-23410843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               132-315
               

               Cow position:
               chr25:10748539-10748348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               132-316
               

               Cow position:
               chr25:30021035-30021223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               132-324
               

               Cow position:
               chr25:26457717-26457516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               132-380
               

               Cow position:
               chr25:8512127-8511876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               133-357
               

               Cow position:
               chr25:6177996-6178227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               150-324
               

               Cow position:
               chr25:41094157-41093976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               70-324
               

               Cow position:
               chr26:12669113-12669378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               101-362
               

               Cow position:
               chr26:7955802-7956066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               103-321
               

               Cow position:
               chr26:19903331-19903557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               104-324
               

               Cow position:
               chr26:8651656-8651430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               106-324
               

               Cow position:
               chr26:33194599-33194807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               110-346
               

               Cow position:
               chr26:9632413-9632162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               112-324
               

               Cow position:
               chr26:19110870-19111092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               112-335
               

               Cow position:
               chr26:27585733-27585963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               112-353
               

               Cow position:
               chr26:21578128-21577887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               124-299
               

               Cow position:
               chr26:11567996-11567818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               125-355
               

               Cow position:
               chr26:14080679-14080915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 119
               

               Conread position:
               127-352
               

               Cow position:
               chr26:10523472-10523245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               70, 90
               

               Conread position:
               131-314
               

               Cow position:
               chr26:30605381-30605198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               131-333
               

               Cow position:
               chr26:3019437-3019230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               131-347
               

               Cow position:
               chr26:9666430-9666213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               131-363
               

               Cow position:
               chr26:32215422-32215664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 157
               

               Conread position:
               131-390
               

               Cow position:
               chr26:18719234-18719500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 212
               

               Conread position:
               132-324
               

               Cow position:
               chr26:7162431-7162231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               132-342
               

               Cow position:
               chr26:16604266-16604490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               137-307
               

               Cow position:
               chr26:24183057-24182886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               138-312
               

               Cow position:
               chr26:19935371-19935193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 44
               

               Conread position:
               140-335
               

               Cow position:
               chr26:12520015-12520219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               155-335
               

               Cow position:
               chr26:10137738-10137551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 113
               

               Conread position:
               156-335
               

               Cow position:
               chr26:12216860-12217036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               160-316
               

               Cow position:
               chr26:19768799-19768633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               166-314
               

               Cow position:
               chr26:7387780-7387937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               191-347
               

               Cow position:
               chr26:12652197-12652041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               89, 102
               

               Conread position:
               193-338
               

               Cow position:
               chr26:19332954-19332812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               212-335
               

               Cow position:
               chr26:25241695-25241818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-337
               

               Cow position:
               chr27:30365343-30365098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               101-359
               

               Cow position:
               chr27:20765935-20766195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               106-291
               

               Cow position:
               chr27:11416467-11416277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               110-372
               

               Cow position:
               chr27:8430423-8430690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               112-319
               

               Cow position:
               chr27:12244111-12244327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               112-337
               

               Cow position:
               chr27:783716-783486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               112-348
               

               Cow position:
               chr27:19601394-19601144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 172
               

               Conread position:
               112-377
               

               Cow position:
               chr27:12247692-12247427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               114-335
               

               Cow position:
               chr27:25982714-25982936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               115-353
               

               Cow position:
               chr27:13970376-13970614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               116-322
               

               Cow position:
               chr27:14937417-14937632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 170
               

               Conread position:
               128-335
               

               Cow position:
               chr27:25970399-25970189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               129-360
               

               Cow position:
               chr27:13958347-13958587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               131-335
               

               Cow position:
               chr27:21578581-21578793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               131-338
               

               Cow position:
               chr27:1536723-1536948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               134-392
               

               Cow position:
               chr27:30790456-30790202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               138-319
               

               Cow position:
               chr27:23662610-23662795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               140-313
               

               Cow position:
               chr27:21970902-21971078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               141-362
               

               Cow position:
               chr27:13005827-13005605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               150-347
               

               Cow position:
               chr27:10119103-10119313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               151-335
               

               Cow position:
               chr27:16525870-16526059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               158-337
               

               Cow position:
               chr27:25880069-25879882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               191-338
               

               Cow position:
               chr27:18219323-18219179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               191-375
               

               Cow position:
               chr27:1899646-1899828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               166, 102
               

               Conread position:
               191-451
               

               Cow position:
               chr27:17875216-17875471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               209, 146
               

               Conread position:
               192-324
               

               Cow position:
               chr27:9692095-9692224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               100-305
               

               Cow position:
               chr28:12999030-12999245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               100-378
               

               Cow position:
               chr28:1202303-1202024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               101-289
               

               Cow position:
               chr28:5406492-5406684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               106-259
               

               Cow position:
               chr28:4098771-4098933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               108-254
               

               Cow position:
               chr28:13693696-13693848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               110-348
               

               Cow position:
               chr28:31166039-31165790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               111-335
               

               Cow position:
               chr28:7540213-7539979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               23, 168
               

               Conread position:
               112-322
               

               Cow position:
               chr28:29455709-29455504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               112-324
               

               Cow position:
               chr28:6643336-6643112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               112-335
               

               Cow position:
               chr28:19253427-19253657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               112-342
               

               Cow position:
               chr28:9237262-9237500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               112-375
               

               Cow position:
               chr28:33285166-33284888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               115-344
               

               Cow position:
               chr28:11181214-11180977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 201
               

               Conread position:
               115-380
               

               Cow position:
               chr28:4763826-4764102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               17, 191
               

               Conread position:
               117-310
               

               Cow position:
               chr28:15081971-15081767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               117-332
               

               Cow position:
               chr28:11007148-11007375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 203
               

               Conread position:
               128-313
               

               Cow position:
               chr28:8335923-8336119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               131-339
               

               Cow position:
               chr28:4274875-4274662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               160-347
               

               Cow position:
               chr28:23703410-23703597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               191-347
               

               Cow position:
               chr28:22421950-22421794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 143
               

               Conread position:
               218-324
               

               Cow position:
               chr28:22498436-22498542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-310
               

               Cow position:
               chr29:7054344-7054560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 151
               

               Conread position:
               103-364
               

               Cow position:
               chr29:18540989-18541245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               106-322
               

               Cow position:
               chr29:16055194-16054976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               106-324
               

               Cow position:
               chr29:37961043-37960816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               107-324
               

               Cow position:
               chr29:4367658-4367885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 198
               

               Conread position:
               111-335
               

               Cow position:
               chr29:1340722-1340955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               112-322
               

               Cow position:
               chr29:14758921-14758702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               112-338
               

               Cow position:
               chr29:6772073-6772307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 133
               

               Conread position:
               112-356
               

               Cow position:
               chr29:21265701-21265954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               115-312
               

               Cow position:
               chr29:25426713-25426509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 136
               

               Conread position:
               115-322
               

               Cow position:
               chr29:26298916-26299129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               116-307
               

               Cow position:
               chr29:13554080-13554282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               117-365
               

               Cow position:
               chr29:29302714-29302460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 195
               

               Conread position:
               131-307
               

               Cow position:
               chr29:19508913-19509089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 158
               

               Conread position:
               132-335
               

               Cow position:
               chr29:5976822-5976618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               132-360
               

               Cow position:
               chr29:34699872-34699648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               133-324
               

               Cow position:
               chr29:18072904-18073099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               141-324
               

               Cow position:
               chr29:7407928-7407743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               161-335
               

               Cow position:
               chr29:19734660-19734834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-324
               

               Cow position:
               chr29:7637530-7637399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               191-346
               

               Cow position:
               chr29:23742233-23742082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               191-354
               

               Cow position:
               chr29:11071656-11071495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               192-346
               

               Cow position:
               chr29:942849-943007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-359
               

               Cow position:
               chr29:32080576-32080741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               197-338
               

               Cow position:
               chr29:9662050-9662191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-119
               

               Cow position:
               chr8:26042139-26042021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               94-307
               

               Cow position:
               chr8:48763490-48763703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               95-380
               

               Cow position:
               chr8:5997823-5997542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               97-335
               

               Cow position:
               chr8:53866045-53866286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               103-317
               

               Cow position:
               chr8:57387880-57388101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               105-310
               

               Cow position:
               chr8:29413837-29414053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 6
               

               Conread position:
               106-339
               

               Cow position:
               chr8:37487353-37487108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               106-360
               

               Cow position:
               chr8:35218318-35218574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               108-324
               

               Cow position:
               chr8:18001299-18001093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               110-307
               

               Cow position:
               chr8:34318124-34317914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               110-340
               

               Cow position:
               chr8:6723850-6723620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               110-345
               

               Cow position:
               chr8:11249525-11249289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               112-315
               

               Cow position:
               chr8:27053646-27053437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               112-323
               

               Cow position:
               chr8:9811751-9811974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr8:26922573-26922795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 175
               

               Conread position:
               112-324
               

               Cow position:
               chr8:46203220-46203440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               112-328
               

               Cow position:
               chr8:7671305-7671518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               112-331
               

               Cow position:
               chr8:29935867-29936099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               112-336
               

               Cow position:
               chr8:13975845-13976076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               112-345
               

               Cow position:
               chr8:27294679-27294920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 207
               

               Conread position:
               112-347
               

               Cow position:
               chr8:28221611-28221371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 148
               

               Conread position:
               112-361
               

               Cow position:
               chr8:25075548-25075807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               112-365
               

               Cow position:
               chr8:20052968-20052705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               115-324
               

               Cow position:
               chr8:55829393-55829174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               115-330
               

               Cow position:
               chr8:13810158-13810382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 56
               

               Conread position:
               115-335
               

               Cow position:
               chr8:20682354-20682583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               77, 24
               

               Conread position:
               115-349
               

               Cow position:
               chr8:49265350-49265107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 192
               

               Conread position:
               116-394
               

               Cow position:
               chr8:6469209-6468925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               117-355
               

               Cow position:
               chr8:31690764-31691009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 165
               

               Conread position:
               118-360
               

               Cow position:
               chr8:51905084-51904827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 163
               

               Conread position:
               122-323
               

               Cow position:
               chr8:8902013-8901813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               123-359
               

               Cow position:
               chr8:36505345-36505585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               124-329
               

               Cow position:
               chr8:31815077-31814864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               131-324
               

               Cow position:
               chr8:43693184-43693382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 164
               

               Conread position:
               131-335
               

               Cow position:
               chr8:26451094-26451309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               131-360
               

               Cow position:
               chr8:55305052-55305289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               132-382
               

               Cow position:
               chr8:942788-943037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               138-347
               

               Cow position:
               chr8:17064105-17063894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               11, 187
               

               Conread position:
               138-348
               

               Cow position:
               chr8:15969579-15969368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               140-336
               

               Cow position:
               chr8:24426637-24426840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               140-338
               

               Cow position:
               chr8:39017686-39017893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               141-312
               

               Cow position:
               chr8:45586435-45586261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               141-324
               

               Cow position:
               chr8:8134516-8134328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               141-331
               

               Cow position:
               chr8:25573026-25573222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               142-347
               

               Cow position:
               chr8:41318025-41318233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               143-340
               

               Cow position:
               chr8:43803536-43803742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 7
               

               Conread position:
               154-319
               

               Cow position:
               chr8:46640336-46640168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               157-324
               

               Cow position:
               chr8:37114907-37114739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               159-313
               

               Cow position:
               chr8:6330682-6330841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               160-319
               

               Cow position:
               chr8:32079677-32079515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               166-338
               

               Cow position:
               chr8:24547027-24547204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               171-322
               

               Cow position:
               chr8:36471557-36471712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               171-340
               

               Cow position:
               chr8:13900414-13900590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               191-365
               

               Cow position:
               chr8:13738554-13738725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               162, 13
               

               Conread position:
               193-324
               

               Cow position:
               chr8:39936665-39936795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               193-335
               

               Cow position:
               chr8:18743539-18743678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               235-827
               

               Cow position:
               chr8:26041886-26041298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 58
               

               Conread position:
               856-1080
               

               Cow position:
               chr8:26041293-26041081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               218, 40
               

               Conread position:
               63-347
               

               Cow position:
               chr9:46252951-46252665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               76-322
               

               Cow position:
               chr9:27292155-27292409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               99-322
               

               Cow position:
               chr9:15006652-15006879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               99-359
               

               Cow position:
               chr9:19382428-19382162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               100-335
               

               Cow position:
               chr9:4538760-4539004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               101-318
               

               Cow position:
               chr9:32847983-32847761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               101-337
               

               Cow position:
               chr9:16118822-16118588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               103-338
               

               Cow position:
               chr9:32817044-32817289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               104-345
               

               Cow position:
               chr9:54206230-54206484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               106-380
               

               Cow position:
               chr9:34725419-34725697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               109-324
               

               Cow position:
               chr9:40007947-40007728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               110-324
               

               Cow position:
               chr9:56861095-56860882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               110-329
               

               Cow position:
               chr9:8657344-8657570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 36
               

               Conread position:
               111-338
               

               Cow position:
               chr9:6203704-6203933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 199
               

               Conread position:
               112-310
               

               Cow position:
               chr9:41957892-41957686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-335
               

               Cow position:
               chr9:32266310-32266531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               112-337
               

               Cow position:
               chr9:14184751-14184523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               112-337
               

               Cow position:
               chr9:50522263-50522483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               112-338
               

               Cow position:
               chr9:17110858-17110625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               112-338
               

               Cow position:
               chr9:34310113-34309880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               112-339
               

               Cow position:
               chr9:34204218-34203980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-357
               

               Cow position:
               chr9:10127586-10127833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               112-359
               

               Cow position:
               chr9:20039048-20039298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               115-324
               

               Cow position:
               chr9:15033989-15033774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 102
               

               Conread position:
               115-324
               

               Cow position:
               chr9:48773430-48773219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               116-304
               

               Cow position:
               chr9:21462784-21462981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               116-325
               

               Cow position:
               chr9:9200640-9200857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 137
               

               Conread position:
               116-335
               

               Cow position:
               chr9:39428714-39428945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               116-393
               

               Cow position:
               chr9:29808539-29808260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 133
               

               Conread position:
               118-358
               

               Cow position:
               chr9:30020049-30019816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               119-335
               

               Cow position:
               chr9:42173117-42173330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               125-324
               

               Cow position:
               chr9:5172402-5172199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               12, 134
               

               Conread position:
               131-312
               

               Cow position:
               chr9:5059252-5059437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               131-338
               

               Cow position:
               chr9:43926045-43926253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               131-358
               

               Cow position:
               chr9:20896965-20896732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               131-360
               

               Cow position:
               chr9:24837605-24837371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 182
               

               Conread position:
               132-315
               

               Cow position:
               chr9:64007819-64008007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               135-347
               

               Cow position:
               chr9:25469108-25468897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               136-386
               

               Cow position:
               chr9:33059216-33059469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               140-330
               

               Cow position:
               chr9:20839683-20839488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               141-324
               

               Cow position:
               chr9:18237109-18237291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               141-335
               

               Cow position:
               chr9:39152626-39152825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               141-358
               

               Cow position:
               chr9:36827739-36827534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               150-346
               

               Cow position:
               chr9:53794483-53794684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               151-322
               

               Cow position:
               chr9:35708575-35708751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               154-360
               

               Cow position:
               chr9:50827887-50828094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               156-338
               

               Cow position:
               chr9:26645954-26645772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               162-338
               

               Cow position:
               chr9:9761075-9760896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               167-319
               

               Cow position:
               chr9:11102771-11102929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               179-335
               

               Cow position:
               chr9:2391351-2391196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               120, 18
               

               Conread position:
               179-362
               

               Cow position:
               chr9:6347005-6346824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               191-335
               

               Cow position:
               chr9:62330999-62331143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               206-324
               

               Cow position:
               chr9:21566627-21566745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               50-338
               

               Cow position:
               chrX:18287171-18286878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               52-339
               

               Cow position:
               chrX:27771668-27771372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 200
               

               Conread position:
               92-382
               

               Cow position:
               chrX:21640374-21640668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               103-309
               

               Cow position:
               chrX:11562117-11562324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               103-324
               

               Cow position:
               chrX:46083933-46084163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 13
               

               Conread position:
               104-333
               

               Cow position:
               chrX:26619145-26618918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               106-342
               

               Cow position:
               chrX:5046933-5046705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               155, 11
               

               Conread position:
               110-338
               

               Cow position:
               chrX:31340677-31340916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               111-337
               

               Cow position:
               chrX:23414403-23414172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 136
               

               Conread position:
               111-382
               

               Cow position:
               chrX:33803038-33802763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               23, 246
               

               Conread position:
               112-304
               

               Cow position:
               chrX:25338154-25338358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               112-307
               

               Cow position:
               chrX:9539293-9539495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               112-307
               

               Cow position:
               chrX:9839195-9839397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               112-309
               

               Cow position:
               chrX:28787324-28787520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               112-310
               

               Cow position:
               chrX:19678297-19678098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               112-318
               

               Cow position:
               chrX:630339-630123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               112-324
               

               Cow position:
               chrX:6563490-6563708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 202
               

               Conread position:
               112-324
               

               Cow position:
               chrX:21664753-21664534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 203
               

               Conread position:
               112-324
               

               Cow position:
               chrX:38999824-39000039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               112-338
               

               Cow position:
               chrX:27287766-27287534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 149
               

               Conread position:
               115-309
               

               Cow position:
               chrX:27176344-27176138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 169
               

               Conread position:
               115-312
               

               Cow position:
               chrX:47744064-47744266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               115-318
               

               Cow position:
               chrX:26940531-26940333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               146, 35
               

               Conread position:
               116-264
               

               Cow position:
               chrX:39546003-39545846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               116-324
               

               Cow position:
               chrX:36009939-36009725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               116-345
               

               Cow position:
               chrX:7425442-7425677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               116-347
               

               Cow position:
               chrX:7497213-7497447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 138
               

               Conread position:
               116-365
               

               Cow position:
               chrX:16514291-16514041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               128-324
               

               Cow position:
               chrX:23179294-23179091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               131-362
               

               Cow position:
               chrX:25713782-25714024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               133-335
               

               Cow position:
               chrX:20376959-20377165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 120
               

               Conread position:
               141-324
               

               Cow position:
               chrX:18456404-18456591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 106
               

               Conread position:
               141-335
               

               Cow position:
               chrX:40789211-40789405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               142-335
               

               Cow position:
               chrX:29874370-29874170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               146-312
               

               Cow position:
               chrX:16419154-16419325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               146-362
               

               Cow position:
               chrX:159752-159531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 112
               

               Conread position:
               157-324
               

               Cow position:
               chrX:34470734-34470901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 120
               

               Conread position:
               158-335
               

               Cow position:
               chrX:33585518-33585690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               191-310
               

               Cow position:
               chrX:3951098-3951217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-319
               

               Cow position:
               chrX:10289569-10289444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               191-324
               

               Cow position:
               chrX:46028704-46028571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-330
               

               Cow position:
               chrX:18417247-18417110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               192-351
               

               Cow position:
               chrX:488737-488893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               192-360
               

               Cow position:
               chrX:25602389-25602556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               196-347
               

               Cow position:
               chrX:31273265-31273416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-324
               

               Cow position:
               chrX:8103224-8103102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               199-354
               

               Cow position:
               chrX:48428579-48428734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
Conread position:	97-362
Cow position:	chr10:25479004-25479267 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	187
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	12, 160
Conread position:	99-347
Cow position:	chr10:15391394-15391652 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	187
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	10, 18
Conread position:	101-307
Cow position:	chr10:38429637-38429427 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	147
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	33, 9
Conread position:	103-324
Cow position:	chr10:11032584-11032359 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	162
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	29, 13
Conread position:	103-335
Cow position:	chr10:45606513-45606283 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	165
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	99, 13
Conread position:	103-361
Cow position:	chr10:66753149-66753421 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	187
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	30, 13
Conread position:	104-338
Cow position:	chr10:23404112-23404352 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	173
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	30, 12
Conread position:	105-346
Cow position:	chr10:20110030-20109790 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	184
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	26, 11
Conread position:	106-335
Cow position:	chr10:22479811-22479576 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	165
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	28, 13
Conread position:	111-354
Cow position:	chr10:11404219-11403970 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	178
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	22, 50
Conread position:	112-284
Cow position:	chr10:21424758-21424579 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	134
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	30, 0
Conread position:	112-319
Cow position:	chr10:15874157-15873942 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	165
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	31, 69
Conread position:	112-324
Cow position:	chr10:48255305-48255084 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	165
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	76, 29
Conread position:	112-335
Cow position:	chr10:10124262-10124494 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	170
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	22, 0
Conread position:	112-339
Cow position:	chr10:58608028-58608257 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	163
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	81, 15
Conread position:	112-345
Cow position:	chr10:6012118-6011891 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	165
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	25, 54
Conread position:	112-348
Cow position:	chr10:8413132-8412890 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	176
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	25, 40
Conread position:	112-360
Cow position:	chr10:6038418-6038171 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	174
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	25, 107
Conread position:	112-387
Cow position:	chr10:49624683-49624967 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	194
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	21, 249
Conread position:	115-322
Cow position:	chr10:2407210-2406995 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	160
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	23, 46