Cow genome map
| Conread name: | Ss1.1-rduo425b_a9.5 |
| Conread position: | 5-275 |
| Cow position: | chr1:31423998-31424269 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 9-279 |
| Cow position: | chr1:67283909-67283634 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 50-275 |
| Cow position: | chr1:76045051-76045277 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 51-278 |
| Cow position: | chr10:6262591-6262821 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 131-278 |
| Cow position: | chr10:34668089-34668233 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 28-279 |
| Cow position: | chr11:10219406-10219650 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 56-264 |
| Cow position: | chr11:47763082-47763288 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 132 |
| Conread position: | 39-273 |
| Cow position: | chr14:50131673-50131438 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 109-278 |
| Cow position: | chr14:42123637-42123808 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 18-278 |
| Cow position: | chr15:32671041-32670779 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 57-268 |
| Cow position: | chr15:4955298-4955100 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 276-389 |
| Cow position: | chr15:30817723-30817610 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-540 |
| Cow position: | chr15:30816797-30816646 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-278 |
| Cow position: | chr16:28875309-28875057 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 61-278 |
| Cow position: | chr18:35845847-35846053 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 17-278 |
| Cow position: | chr2:5978866-5978604 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 17-278 |
| Cow position: | chr2:28712468-28712724 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 30-278 |
| Cow position: | chr2:36055249-36055491 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 31-276 |
| Cow position: | chr2:34473139-34473379 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 58-253 |
| Cow position: | chr2:56846265-56846076 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 63-274 |
| Cow position: | chr2:50401148-50400942 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 50-278 |
| Cow position: | chr22:294625-294854 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 73-272 |
| Cow position: | chr22:45107873-45108068 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 74-278 |
| Cow position: | chr22:36593582-36593782 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 122-278 |
| Cow position: | chr22:36582545-36582696 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 46 |
| Conread position: | 23-277 |
| Cow position: | chr23:26835779-26835532 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 6-278 |
| Cow position: | chr24:16651404-16651671 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 73-276 |
| Cow position: | chr24:6045744-6045551 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 17-277 |
| Cow position: | chr26:12581314-12581059 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 56-275 |
| Cow position: | chr28:10291797-10291571 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 146 |
| Conread position: | 50-278 |
| Cow position: | chr3:21307063-21307291 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 25-278 |
| Cow position: | chr4:43916041-43915797 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 30-278 |
| Cow position: | chr5:57977759-57978008 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 56-278 |
| Cow position: | chr6:31638510-31638728 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 5-279 |
| Cow position: | chr7:30120849-30121114 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 25-278 |
| Cow position: | chrX:6252156-6252399 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 31-273 |
| Cow position: | chrX:29810958-29810721 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 33-273 |
| Cow position: | chrX:41891040-41891277 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 92 |