Cow genome map
| Conread name: | Ss1.1-rduo434b_e14.5.5 |
| Conread position: | 450-901 |
| Cow position: | chr10:16293758-16294207 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 43 |
| Conread position: | 1434-1743 |
| Cow position: | chr12:45098790-45098493 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 209-735 |
| Cow position: | chr13:33341267-33340756 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 30 |
| Conread position: | 249-900 |
| Cow position: | chr13:34973170-34972529 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 124 |
| Conread position: | 1574-1748 |
| Cow position: | chr19:36119077-36119259 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 198-1742 |
| Cow position: | chr2:84257836-84256303 (view UCSC Genome Browser custom track) |
| Alignm length: | 1546 |
| Alignm identity: | 1216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 229 |
| Conread position: | 211-934 |
| Cow position: | chr2:76342802-76342061 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 69 |
| Conread position: | 242-636 |
| Cow position: | chr2:5916227-5916612 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 72 |
| Conread position: | 22-412 |
| Cow position: | chr21:47465855-47466239 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 209-901 |
| Cow position: | chr21:39567427-39566730 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 201 |
| Conread position: | 211-808 |
| Cow position: | chr23:9542346-9541758 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 395 |
| Conread position: | 882-1109 |
| Cow position: | chr24:19426489-19426262 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 124 |
| Conread position: | 1565-1752 |
| Cow position: | chr24:19426663-19426841 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 209-843 |
| Cow position: | chr25:2045060-2044420 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 397 |
| Conread position: | 209-736 |
| Cow position: | chr3:44434956-44435470 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 156 |
| Conread position: | 209-934 |
| Cow position: | chr3:42725983-42726708 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 156 |
| Conread position: | 221-456 |
| Cow position: | chr3:187745-187509 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 227-934 |
| Cow position: | chr3:28699271-28699977 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 379 |
| Conread position: | 335-1186 |
| Cow position: | chr4:49740479-49739628 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 822 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1268-1764 |
| Cow position: | chr4:49739577-49739083 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 240-736 |
| Cow position: | chr5:52103918-52103425 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 169 |
| Conread position: | 456-666 |
| Cow position: | chr5:16535619-16535409 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 141, 150 |
| Conread position: | 1571-1744 |
| Cow position: | chr6:55006260-55006432 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 4-200 |
| Cow position: | chr7:14433272-14433465 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-299 |
| Cow position: | chr7:4126134-4126429 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 15 |
| Conread position: | 4-303 |
| Cow position: | chr7:1073922-1073634 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 297, 14 |
| Conread position: | 191-718 |
| Cow position: | chr7:37344213-37343686 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 139, 127 |
| Conread position: | 198-987 |
| Cow position: | chr7:27793632-27792839 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 669 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 625, 318 |
| Conread position: | 198-1023 |
| Cow position: | chr7:14433499-14434324 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 681 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 198-1664 |
| Cow position: | chr7:14408485-14409927 (view UCSC Genome Browser custom track) |
| Alignm length: | 1472 |
| Alignm identity: | 1202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 752, 804 |
| Conread position: | 198-1742 |
| Cow position: | chr7:11454845-11456374 (view UCSC Genome Browser custom track) |
| Alignm length: | 1553 |
| Alignm identity: | 1234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 575, 1012 |
| Conread position: | 224-906 |
| Cow position: | chr7:11575112-11574432 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 166 |
| Conread position: | 879-1302 |
| Cow position: | chr7:11574498-11574090 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 208 |
| Conread position: | 938-1411 |
| Cow position: | chr7:14434194-14434665 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 302 |
| Conread position: | 1193-1414 |
| Cow position: | chr7:27792846-27792631 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 119, 33 |
| Conread position: | 1328-1557 |
| Cow position: | chr7:14424029-14423814 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1336-1560 |
| Cow position: | chr7:11574094-11573882 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1411-1745 |
| Cow position: | chr7:14434815-14435137 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1543-1743 |
| Cow position: | chr7:11573853-11573652 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 1576-1741 |
| Cow position: | chr7:14423822-14423669 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 209-736 |
| Cow position: | chr8:40436573-40436053 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 55 |
| Conread position: | 267-781 |
| Cow position: | chr8:53118793-53118278 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 104 |
| Conread position: | 202-932 |
| Cow position: | chr9:20570097-20570826 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 58 |
| Conread position: | 311-1015 |
| Cow position: | chr9:57166600-57165884 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 99 |
| Conread position: | 221-563 |
| Cow position: | chrX:38795055-38795394 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |