Cow genome map
| Conread name: | Ss1.1-rebs08c_g1.5 |
| Conread position: | 1-586 |
| Cow position: | chr10:46593685-46593103 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 0 |
| Conread position: | 302-582 |
| Cow position: | chr16:19694549-19694810 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-120 |
| Cow position: | chr17:45721075-45721194 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-120 |
| Cow position: | chr17:45743102-45742983 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr17:45721677-45721827 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-275 |
| Cow position: | chr17:45756649-45756538 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 274-582 |
| Cow position: | chr17:45721914-45722222 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-582 |
| Cow position: | chr17:45756451-45756143 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-129 |
| Cow position: | chr2:65193077-65192950 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-129 |
| Cow position: | chr2:65209547-65209674 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr2:65192641-65192491 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr2:65209977-65210127 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 130 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-582 |
| Cow position: | chr2:65210868-65211176 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-411 |
| Cow position: | chr2:65192246-65192111 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 120 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-588 |
| Cow position: | chr21:17711586-17712173 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-582 |
| Cow position: | chr23:20802302-20801884 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 199, 206 |
| Conread position: | 1-129 |
| Cow position: | chr5:22167134-22167006 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 121 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-129 |
| Cow position: | chr5:22179117-22178989 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 120 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-129 |
| Cow position: | chr5:22299670-22299798 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 121 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-129 |
| Cow position: | chr5:22341844-22341972 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 121 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-558 |
| Cow position: | chr5:17899774-17899217 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr5:22166868-22166718 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr5:22178851-22178701 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr5:22299937-22300087 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr5:22342111-22342261 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr5:24450359-24450509 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-275 |
| Cow position: | chr5:67435682-67435532 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-582 |
| Cow position: | chr5:22342618-22342930 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-582 |
| Cow position: | chr5:22164638-22164330 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-582 |
| Cow position: | chr5:24452592-24452900 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-582 |
| Cow position: | chr5:67434072-67433774 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-554 |
| Cow position: | chr7:292894-292346 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |