Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rebs25c_d20.5
        

               Conread position:
               73-479
               

               Cow position:
               chr10:8996447-8996041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-514
               

               Cow position:
               chr10:8996699-8996258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-514
               

               Cow position:
               chr10:8996783-8996342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               394, 387
               

               Conread position:
               81-485
               

               Cow position:
               chr10:21939175-21938771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-509
               

               Cow position:
               chr10:8996606-8996179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 77
               

               Conread position:
               72-386
               

               Cow position:
               chr11:74554539-74554225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr11:74554707-74554270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-339
               

               Cow position:
               chr11:50368543-50368277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               161, 155
               

               Conread position:
               73-470
               

               Cow position:
               chr11:74554622-74554225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr11:74554790-74554354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               73-509
               

               Cow position:
               chr11:74554874-74554438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-509
               

               Cow position:
               chr11:74554958-74554522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 57
               

               Conread position:
               73-514
               

               Cow position:
               chr11:74555042-74554601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               417, 399
               

               Conread position:
               96-514
               

               Cow position:
               chr11:74555103-74554685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 63
               

               Conread position:
               109-451
               

               Cow position:
               chr11:50368591-50368245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               320, 0
               

               Conread position:
               181-509
               

               Cow position:
               chr11:74555102-74554774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               202-507
               

               Cow position:
               chr11:50368582-50368277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               282-513
               

               Cow position:
               chr11:50368586-50368354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               121, 127
               

               Conread position:
               60-514
               

               Cow position:
               chr13:24162872-24163326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               331, 335
               

               Conread position:
               60-525
               

               Cow position:
               chr13:22124978-22125440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               444, 0
               

               Conread position:
               62-498
               

               Cow position:
               chr13:22125314-22125752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 150
               

               Conread position:
               62-498
               

               Cow position:
               chr13:24163040-24163478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 150
               

               Conread position:
               68-510
               

               Cow position:
               chr13:22124818-22125260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               138, 145
               

               Conread position:
               70-403
               

               Cow position:
               chr13:24163302-24163635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               138, 143
               

               Conread position:
               72-495
               

               Cow position:
               chr13:22125242-22125665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               226, 222
               

               Conread position:
               72-495
               

               Cow position:
               chr13:24162968-24163391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               226, 222
               

               Conread position:
               72-525
               

               Cow position:
               chr13:24162716-24163166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               432, 0
               

               Conread position:
               73-356
               

               Cow position:
               chr13:39930878-39931159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               269, 0
               

               Conread position:
               73-428
               

               Cow position:
               chr13:39930794-39931149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               328, 324
               

               Conread position:
               73-485
               

               Cow position:
               chr13:24163221-24163633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               73-494
               

               Cow position:
               chr13:22125495-22125916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               73-508
               

               Cow position:
               chr13:39930710-39931145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               328, 324
               

               Conread position:
               73-509
               

               Cow position:
               chr13:22124739-22125175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               217, 224
               

               Conread position:
               73-514
               

               Cow position:
               chr13:22124907-22125348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               73-514
               

               Cow position:
               chr13:22125159-22125600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               318, 322
               

               Conread position:
               73-514
               

               Cow position:
               chr13:24162465-24162906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               277
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               217, 224
               

               Conread position:
               73-514
               

               Cow position:
               chr13:24162633-24163074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               285
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               73-529
               

               Cow position:
               chr13:22125075-22125528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               445, 0
               

               Conread position:
               74-514
               

               Cow position:
               chr13:39930627-39931067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               327, 323
               

               Conread position:
               85-510
               

               Cow position:
               chr13:24162561-24162986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 128
               

               Conread position:
               85-529
               

               Cow position:
               chr13:24162813-24163254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               433, 0
               

               Conread position:
               143-472
               

               Cow position:
               chr13:24162451-24162780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 90
               

               Conread position:
               146-507
               

               Cow position:
               chr13:22124728-22125089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               76, 87
               

               Conread position:
               152-514
               

               Cow position:
               chr13:39930621-39930983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               249, 245
               

               Conread position:
               62-509
               

               Cow position:
               chr14:25895755-25896203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               68-470
               

               Cow position:
               chr14:25894922-25895324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               341, 319
               

               Conread position:
               70-485
               

               Cow position:
               chr14:25877389-25877804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               249, 256
               

               Conread position:
               70-513
               

               Cow position:
               chr14:25836361-25836805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               441, 0
               

               Conread position:
               71-468
               

               Cow position:
               chr14:25895597-25895994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-485
               

               Cow position:
               chr14:25860339-25860753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               248, 255
               

               Conread position:
               71-508
               

               Cow position:
               chr14:25876718-25877155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               329, 335
               

               Conread position:
               71-509
               

               Cow position:
               chr14:25895933-25896371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-511
               

               Cow position:
               chr14:433789-434229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               72-355
               

               Cow position:
               chr14:3079942-3079657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               72-467
               

               Cow position:
               chr14:3127874-3127480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 0
               

               Conread position:
               72-470
               

               Cow position:
               chr14:25895430-25895828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-489
               

               Cow position:
               chr14:25895010-25895427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               155, 171
               

               Conread position:
               72-508
               

               Cow position:
               chr14:3061089-3060653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 153
               

               Conread position:
               72-509
               

               Cow position:
               chr14:3156046-3156483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr14:25836447-25836884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-511
               

               Cow position:
               chr14:25895346-25895785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-513
               

               Cow position:
               chr14:3061341-3060899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               279
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               72-514
               

               Cow position:
               chr14:680455-680897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               419, 412
               

               Conread position:
               72-514
               

               Cow position:
               chr14:25895094-25895536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 152
               

               Conread position:
               72-514
               

               Cow position:
               chr14:25895514-25895956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 71
               

               Conread position:
               73-352
               

               Cow position:
               chr14:3155558-3155837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               252, 239
               

               Conread position:
               73-385
               

               Cow position:
               chr14:663422-663110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               73-416
               

               Cow position:
               chr14:447906-448249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               73-424
               

               Cow position:
               chr14:3127621-3127270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               151, 139
               

               Conread position:
               73-440
               

               Cow position:
               chr14:3128041-3127674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               147, 153
               

               Conread position:
               73-498
               

               Cow position:
               chr14:447822-448247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-507
               

               Cow position:
               chr14:433959-434393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               73-507
               

               Cow position:
               chr14:3127705-3127271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               336, 331
               

               Conread position:
               73-508
               

               Cow position:
               chr14:3080445-3080010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr14:680708-681144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               169, 159
               

               Conread position:
               73-509
               

               Cow position:
               chr14:680792-681228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               73-509
               

               Cow position:
               chr14:3080109-3079673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-509
               

               Cow position:
               chr14:3080361-3079925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr14:3127957-3127521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr14:25895263-25895699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 235
               

               Conread position:
               73-509
               

               Cow position:
               chr14:25895683-25896119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr14:433875-434313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 156
               

               Conread position:
               73-511
               

               Cow position:
               chr14:3061172-3060734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 157
               

               Conread position:
               73-511
               

               Cow position:
               chr14:3061256-3060818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               73-511
               

               Cow position:
               chr14:3080277-3079839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr14:3080613-3080175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-513
               

               Cow position:
               chr14:3061592-3061151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               73-514
               

               Cow position:
               chr14:447570-448011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:447654-448095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 163
               

               Conread position:
               73-514
               

               Cow position:
               chr14:447738-448179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:680540-680981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3061424-3060983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3061676-3061235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3080193-3079752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3080529-3080088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 329
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3080697-3080256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3080781-3080340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3080865-3080424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               277
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3127789-3127348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               274
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:3128125-3127684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr14:25895179-25895620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-514
               

               Cow position:
               chr14:25836706-25837141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-514
               

               Cow position:
               chr14:3061499-3061067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-514
               

               Cow position:
               chr14:25877317-25877749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               315, 326
               

               Conread position:
               83-514
               

               Cow position:
               chr14:680634-681065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 238
               

               Conread position:
               84-509
               

               Cow position:
               chr14:25877151-25877576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-506
               

               Cow position:
               chr14:3155975-3156396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               85-514
               

               Cow position:
               chr14:3080937-3080508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-517
               

               Cow position:
               chr14:680384-680816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-481
               

               Cow position:
               chr14:663488-663098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               91-512
               

               Cow position:
               chr14:3155408-3155829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               62, 68
               

               Conread position:
               91-514
               

               Cow position:
               chr14:680222-680645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-514
               

               Cow position:
               chr14:3061742-3061319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 313
               

               Conread position:
               91-517
               

               Cow position:
               chr14:680306-680732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               402, 396
               

               Conread position:
               99-507
               

               Cow position:
               chr14:447512-447920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-511
               

               Cow position:
               chr14:433762-434145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               128-517
               

               Cow position:
               chr14:680175-680564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               237, 241
               

               Conread position:
               146-495
               

               Cow position:
               chr14:3128136-3127787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               155-514
               

               Cow position:
               chr14:25894925-25895284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               171-403
               

               Cow position:
               chr14:185-417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-509
               

               Cow position:
               chr14:663480-663154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 5
               

               Conread position:
               193-517
               

               Cow position:
               chr14:447522-447846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               300, 288
               

               Conread position:
               202-485
               

               Cow position:
               chr14:25836157-25836440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-514
               

               Cow position:
               chr14:3128164-3127852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               267-509
               

               Cow position:
               chr14:447512-447754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               71-422
               

               Cow position:
               chr15:19139009-19138658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               82, 73
               

               Conread position:
               73-471
               

               Cow position:
               chr15:19139343-19138945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-498
               

               Cow position:
               chr15:48468669-48469100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 229
               

               Conread position:
               73-506
               

               Cow position:
               chr15:19139091-19138658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 146
               

               Conread position:
               84-513
               

               Cow position:
               chr15:19139163-19138734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               427, 10
               

               Conread position:
               202-514
               

               Cow position:
               chr15:48468462-48468774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               103, 109
               

               Conread position:
               283-527
               

               Cow position:
               chr15:48468459-48468699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 112
               

               Conread position:
               63-511
               

               Cow position:
               chr17:44467746-44468195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               68-513
               

               Cow position:
               chr17:44467584-44468030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 234
               

               Conread position:
               70-514
               

               Cow position:
               chr17:44467838-44468282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 149
               

               Conread position:
               73-356
               

               Cow position:
               chr17:41440470-41440187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               271, 250
               

               Conread position:
               73-493
               

               Cow position:
               chr17:44468009-44468425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               151, 146
               

               Conread position:
               73-511
               

               Cow position:
               chr17:41440806-41440368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr17:41440974-41440536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 111
               

               Conread position:
               73-511
               

               Cow position:
               chr17:41441058-41440620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 362
               

               Conread position:
               73-511
               

               Cow position:
               chr17:44467505-44467943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 146
               

               Conread position:
               73-511
               

               Cow position:
               chr17:44467673-44468111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 248
               

               Conread position:
               73-514
               

               Cow position:
               chr17:41440638-41440197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 357
               

               Conread position:
               73-567
               

               Cow position:
               chr17:44467421-44467909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 146
               

               Conread position:
               82-510
               

               Cow position:
               chr17:41440713-41440285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               411, 405
               

               Conread position:
               85-511
               

               Cow position:
               chr17:41440878-41440452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 12
               

               Conread position:
               94-511
               

               Cow position:
               chr17:44467357-44467775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 394
               

               Conread position:
               97-510
               

               Cow position:
               chr17:41441118-41440705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               177-514
               

               Cow position:
               chr17:41441122-41440785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-433
               

               Cow position:
               chr17:45350812-45350569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               264-517
               

               Cow position:
               chr17:41441119-41440866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               139, 145
               

               Conread position:
               50-395
               

               Cow position:
               chr18:56128417-56128761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               62-317
               

               Cow position:
               chr18:42724198-42723942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               62-513
               

               Cow position:
               chr18:56391377-56390926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               62-514
               

               Cow position:
               chr18:42724450-42723997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               64-485
               

               Cow position:
               chr18:47846712-47846291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               157, 164
               

               Conread position:
               67-461
               

               Cow position:
               chr18:51400425-51400818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               68-417
               

               Cow position:
               chr18:56391203-56390853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               71-507
               

               Cow position:
               chr18:54668883-54668447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               72-372
               

               Cow position:
               chr18:44817890-44818190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               72-402
               

               Cow position:
               chr18:55497389-55497059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               152, 146
               

               Conread position:
               72-438
               

               Cow position:
               chr18:54668714-54668348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               80, 87
               

               Conread position:
               72-479
               

               Cow position:
               chr18:47846620-47846213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               92, 99
               

               Conread position:
               72-509
               

               Cow position:
               chr18:53635559-53635122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               273
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr18:56128606-56129043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-511
               

               Cow position:
               chr18:42724523-42724084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               272, 249
               

               Conread position:
               72-511
               

               Cow position:
               chr18:47846536-47846097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               76, 70
               

               Conread position:
               72-511
               

               Cow position:
               chr18:49032561-49032122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-513
               

               Cow position:
               chr18:55497641-55497199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 171
               

               Conread position:
               72-513
               

               Cow position:
               chr18:56316366-56316808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               279
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               256, 263
               

               Conread position:
               72-514
               

               Cow position:
               chr18:49032981-49032539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               72-514
               

               Cow position:
               chr18:55497557-55497115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 87
               

               Conread position:
               73-339
               

               Cow position:
               chr18:56391920-56391654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               161, 155
               

               Conread position:
               73-353
               

               Cow position:
               chr18:56391113-56390833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               169, 164
               

               Conread position:
               73-371
               

               Cow position:
               chr18:55442332-55442630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               228, 221
               

               Conread position:
               73-378
               

               Cow position:
               chr18:52011873-52011568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-401
               

               Cow position:
               chr18:42724270-42723942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               292, 298
               

               Conread position:
               73-423
               

               Cow position:
               chr18:52011957-52011607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-431
               

               Cow position:
               chr18:56267478-56267120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 86
               

               Conread position:
               73-438
               

               Cow position:
               chr18:56316703-56317068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-462
               

               Cow position:
               chr18:1418236-1418627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               368, 384
               

               Conread position:
               73-467
               

               Cow position:
               chr18:50848653-50849047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-469
               

               Cow position:
               chr18:22844303-22843904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               73-469
               

               Cow position:
               chr18:51400682-51401078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               245, 252
               

               Conread position:
               73-470
               

               Cow position:
               chr18:50281908-50282305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               223, 229
               

               Conread position:
               73-479
               

               Cow position:
               chr18:1418068-1418474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-481
               

               Cow position:
               chr18:53610485-53610077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-485
               

               Cow position:
               chr18:51400514-51400926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               73-486
               

               Cow position:
               chr18:49032476-49032063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-498
               

               Cow position:
               chr18:56391281-56390856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 248
               

               Conread position:
               73-506
               

               Cow position:
               chr18:53635642-53635209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               419, 414
               

               Conread position:
               73-506
               

               Cow position:
               chr18:56128523-56128956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               419, 414
               

               Conread position:
               73-506
               

               Cow position:
               chr18:56128691-56129124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-508
               

               Cow position:
               chr18:49033148-49032713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               396, 391
               

               Conread position:
               73-508
               

               Cow position:
               chr18:53610401-53609966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               328, 324
               

               Conread position:
               73-509
               

               Cow position:
               chr18:22844219-22843780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 330
               

               Conread position:
               73-509
               

               Cow position:
               chr18:49032896-49032460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               144, 139
               

               Conread position:
               73-509
               

               Cow position:
               chr18:49033232-49032796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr18:49033316-49032880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr18:50083600-50084036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               151, 145
               

               Conread position:
               73-509
               

               Cow position:
               chr18:53635474-53635038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-509
               

               Cow position:
               chr18:55497472-55497036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 146
               

               Conread position:
               73-509
               

               Cow position:
               chr18:56316115-56316551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               169, 164
               

               Conread position:
               73-509
               

               Cow position:
               chr18:56316451-56316887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr18:56329365-56328929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               418, 414
               

               Conread position:
               73-509
               

               Cow position:
               chr18:56329533-56329097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-509
               

               Cow position:
               chr18:56329953-56329517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               420, 415
               

               Conread position:
               73-511
               

               Cow position:
               chr18:49032812-49032374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 55
               

               Conread position:
               73-511
               

               Cow position:
               chr18:56329617-56329179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 412
               

               Conread position:
               73-511
               

               Cow position:
               chr18:56330037-56329599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr18:56391449-56391011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 248
               

               Conread position:
               73-511
               

               Cow position:
               chr18:56391533-56391095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 248
               

               Conread position:
               73-513
               

               Cow position:
               chr18:52012209-52011768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               237, 233
               

               Conread position:
               73-513
               

               Cow position:
               chr18:56316283-56316724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               438, 0
               

               Conread position:
               73-513
               

               Cow position:
               chr18:56329869-56329428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               277
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               438, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr18:49032644-49032203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               84, 80
               

               Conread position:
               73-514
               

               Cow position:
               chr18:50281824-50282265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               73-514
               

               Cow position:
               chr18:51400346-51400787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr18:52012377-52011936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr18:53635894-53635453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr18:56128271-56128712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr18:56316199-56316640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               283
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               84, 78
               

               Conread position:
               73-514
               

               Cow position:
               chr18:56329449-56329008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 86
               

               Conread position:
               73-514
               

               Cow position:
               chr18:56329701-56329260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr18:56329785-56329344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               418, 414
               

               Conread position:
               73-514
               

               Cow position:
               chr18:56330121-56329680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-515
               

               Cow position:
               chr18:53610149-53609707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-516
               

               Cow position:
               chr18:47846451-47846008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-520
               

               Cow position:
               chr18:56329281-56328833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               73-531
               

               Cow position:
               chr18:56316535-56316995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               77-509
               

               Cow position:
               chr18:52012037-52011605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-509
               

               Cow position:
               chr18:53610225-53609797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-509
               

               Cow position:
               chr18:53635718-53635290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               320, 316
               

               Conread position:
               82-514
               

               Cow position:
               chr18:52012284-52011852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-514
               

               Cow position:
               chr18:56128112-56128544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               82-529
               

               Cow position:
               chr18:56316628-56317072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               281
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               418, 0
               

               Conread position:
               83-509
               

               Cow position:
               chr18:53586587-53586161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               83-514
               

               Cow position:
               chr18:53635968-53635537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               84-404
               

               Cow position:
               chr18:53610054-53609734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 154
               

               Conread position:
               84-481
               

               Cow position:
               chr18:53635799-53635402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-467
               

               Cow position:
               chr18:50281752-50282135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               380, 0
               

               Conread position:
               85-479
               

               Cow position:
               chr18:56128367-56128761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 74
               

               Conread position:
               85-511
               

               Cow position:
               chr18:42724594-42724168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               234, 241
               

               Conread position:
               89-338
               

               Cow position:
               chr18:54664083-54664332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-384
               

               Cow position:
               chr18:22843603-22843308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               89-517
               

               Cow position:
               chr18:22844371-22843940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               69, 63
               

               Conread position:
               89-517
               

               Cow position:
               chr18:54668949-54668521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 99
               

               Conread position:
               91-535
               

               Cow position:
               chr18:22844030-22843581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 66
               

               Conread position:
               94-514
               

               Cow position:
               chr18:56330184-56329764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-511
               

               Cow position:
               chr18:56391590-56391179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 221
               

               Conread position:
               102-509
               

               Cow position:
               chr18:55497695-55497288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 295
               

               Conread position:
               109-451
               

               Cow position:
               chr18:56391968-56391622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               320, 0
               

               Conread position:
               117-467
               

               Cow position:
               chr18:46317181-46316826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               309, 353
               

               Conread position:
               118-513
               

               Cow position:
               chr18:56316076-56316472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               359, 346
               

               Conread position:
               157-456
               

               Cow position:
               chr18:55442332-55442631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               226, 220
               

               Conread position:
               157-508
               

               Cow position:
               chr18:56267478-56267127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               79, 86
               

               Conread position:
               162-511
               

               Cow position:
               chr18:54668960-54668611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               181-514
               

               Cow position:
               chr18:56316055-56316388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-486
               

               Cow position:
               chr18:46317198-46316896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               241, 245
               

               Conread position:
               187-511
               

               Cow position:
               chr18:44817837-44818161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               214, 210
               

               Conread position:
               202-507
               

               Cow position:
               chr18:56391959-56391654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               213-514
               

               Cow position:
               chr18:53610429-53610128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-524
               

               Cow position:
               chr18:44818598-44818903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               175, 23
               

               Conread position:
               241-514
               

               Cow position:
               chr18:49033316-49033043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               264, 259
               

               Conread position:
               265-494
               

               Cow position:
               chr18:54664091-54664320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-514
               

               Cow position:
               chr18:44944385-44944626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               277-507
               

               Cow position:
               chr18:54687760-54687990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               282-513
               

               Cow position:
               chr18:56391963-56391731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               121, 127
               

               Conread position:
               283-509
               

               Cow position:
               chr18:49033358-49033132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               210, 204
               

               Conread position:
               69-509
               

               Cow position:
               chr19:23649364-23649804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-401
               

               Cow position:
               chr19:23649535-23649864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-395
               

               Cow position:
               chr19:23597179-23597501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-402
               

               Cow position:
               chr19:14940726-14941055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-482
               

               Cow position:
               chr19:23597095-23597504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-508
               

               Cow position:
               chr19:23649704-23650139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               133, 142
               

               Conread position:
               73-509
               

               Cow position:
               chr19:23649788-23650224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               86-479
               

               Cow position:
               chr19:23649297-23649690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-403
               

               Cow position:
               chr19:17615106-17615410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               170-511
               

               Cow position:
               chr19:23649297-23649638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               322, 317
               

               Conread position:
               183-515
               

               Cow position:
               chr19:17615106-17615438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               73-395
               

               Cow position:
               chr2:82800094-82800416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               133, 140
               

               Conread position:
               73-423
               

               Cow position:
               chr2:82799506-82799856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               151, 141
               

               Conread position:
               73-467
               

               Cow position:
               chr2:82799842-82800236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               51, 56
               

               Conread position:
               73-471
               

               Cow position:
               chr2:48689477-48689080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               333, 68
               

               Conread position:
               73-485
               

               Cow position:
               chr2:82799926-82800338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               300, 307
               

               Conread position:
               73-509
               

               Cow position:
               chr2:82799758-82800194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               80, 86
               

               Conread position:
               73-514
               

               Cow position:
               chr2:86465162-86465603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 145
               

               Conread position:
               84-479
               

               Cow position:
               chr2:82800021-82800416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               205, 212
               

               Conread position:
               85-514
               

               Cow position:
               chr2:82799602-82800031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               240, 234
               

               Conread position:
               117-469
               

               Cow position:
               chr2:48689517-48689166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               157-509
               

               Cow position:
               chr2:82799506-82799858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-511
               

               Cow position:
               chr20:6660994-6660568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               95-435
               

               Cow position:
               chr20:6661068-6660728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 138
               

               Conread position:
               56-514
               

               Cow position:
               chr21:12659047-12659505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               63-509
               

               Cow position:
               chr21:34223080-34222636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               68-513
               

               Cow position:
               chr21:12659227-12659673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               443, 0
               

               Conread position:
               69-482
               

               Cow position:
               chr21:12659564-12659977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               69-511
               

               Cow position:
               chr21:12659144-12659586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               424, 418
               

               Conread position:
               69-513
               

               Cow position:
               chr21:12658808-12659253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               442, 0
               

               Conread position:
               70-468
               

               Cow position:
               chr21:12608365-12607967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-395
               

               Cow position:
               chr21:34222906-34222582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-468
               

               Cow position:
               chr21:12608784-12608387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-507
               

               Cow position:
               chr21:12608532-12608096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-511
               

               Cow position:
               chr21:12658894-12659334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-525
               

               Cow position:
               chr21:12659398-12659849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               429, 0
               

               Conread position:
               73-357
               

               Cow position:
               chr21:12659736-12660020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-424
               

               Cow position:
               chr21:12608278-12607927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-424
               

               Cow position:
               chr21:12659652-12660003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr21:12608446-12608010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 369
               

               Conread position:
               73-509
               

               Cow position:
               chr21:12608614-12608178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 397
               

               Conread position:
               73-509
               

               Cow position:
               chr21:34222988-34222552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               274
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               424, 429
               

               Conread position:
               73-511
               

               Cow position:
               chr21:12608698-12608260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr21:12608866-12608428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 224
               

               Conread position:
               73-511
               

               Cow position:
               chr21:12659316-12659754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 184
               

               Conread position:
               73-511
               

               Cow position:
               chr21:12659484-12659922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-513
               

               Cow position:
               chr21:12658980-12659421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               438, 0
               

               Conread position:
               84-488
               

               Cow position:
               chr21:11852332-11852736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               270, 264
               

               Conread position:
               128-511
               

               Cow position:
               chr21:12608895-12608512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 253
               

               Conread position:
               223-511
               

               Cow position:
               chr21:12658793-12659082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               316-514
               

               Cow position:
               chr21:12658803-12659001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               61-423
               

               Cow position:
               chr22:12458557-12458194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               73-423
               

               Cow position:
               chr22:12499606-12499956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-427
               

               Cow position:
               chr22:12418795-12418441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr22:11640922-11641363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr22:12418963-12418522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               420, 414
               

               Conread position:
               83-514
               

               Cow position:
               chr22:11640848-11641279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               410, 397
               

               Conread position:
               130-423
               

               Cow position:
               chr22:11640643-11640936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 106
               

               Conread position:
               130-506
               

               Cow position:
               chr22:12418990-12418614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-470
               

               Cow position:
               chr23:24560744-24560345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-426
               

               Cow position:
               chr23:25724063-25723710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-440
               

               Cow position:
               chr23:24560658-24560291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-509
               

               Cow position:
               chr23:24639532-24639968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               73-514
               

               Cow position:
               chr23:24560826-24560385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               87-508
               

               Cow position:
               chr23:24626302-24626723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               212, 205
               

               Conread position:
               102-300
               

               Cow position:
               chr23:23495941-23495743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-507
               

               Cow position:
               chr23:25724078-25723713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               258, 254
               

               Conread position:
               180-514
               

               Cow position:
               chr23:25724124-25723790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-509
               

               Cow position:
               chr23:25660161-25660483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               196, 192
               

               Conread position:
               72-509
               

               Cow position:
               chr24:17077947-17077510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               419, 415
               

               Conread position:
               73-401
               

               Cow position:
               chr24:17036315-17035987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-470
               

               Cow position:
               chr24:17036231-17035834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               73-509
               

               Cow position:
               chr24:17036483-17036047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-510
               

               Cow position:
               chr24:17035559-17035122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               144, 137
               

               Conread position:
               1-72
               

               Cow position:
               chr25:3663958-3664029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               72
               

               Alignm identity:
               71
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-511
               

               Cow position:
               chr25:34473427-34473921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               36-511
               

               Cow position:
               chr25:24399044-24398573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               63-475
               

               Cow position:
               chr25:33298698-33299112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               70-262
               

               Cow position:
               chr25:3664411-3664603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-405
               

               Cow position:
               chr25:22235973-22236308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               243, 253
               

               Conread position:
               70-479
               

               Cow position:
               chr25:33530289-33530698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-511
               

               Cow position:
               chr25:3636502-3636061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 389
               

               Conread position:
               70-517
               

               Cow position:
               chr25:33530373-33530821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               71-430
               

               Cow position:
               chr25:3664244-3664602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 338
               

               Conread position:
               71-498
               

               Cow position:
               chr25:33530040-33530465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 7
               

               Conread position:
               71-509
               

               Cow position:
               chr25:33157496-33157058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-288
               

               Cow position:
               chr25:4657235-4657018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               72-339
               

               Cow position:
               chr25:3676138-3676405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-343
               

               Cow position:
               chr25:24398676-24398405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-378
               

               Cow position:
               chr25:22941315-22941009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               72-384
               

               Cow position:
               chr25:25653006-25653318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-397
               

               Cow position:
               chr25:326559-326884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               296, 291
               

               Conread position:
               72-408
               

               Cow position:
               chr25:33529160-33529497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 248
               

               Conread position:
               72-417
               

               Cow position:
               chr25:3676054-3676399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-417
               

               Cow position:
               chr25:24385018-24384673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               272, 277
               

               Conread position:
               72-428
               

               Cow position:
               chr25:3636332-3635976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               331, 337
               

               Conread position:
               72-429
               

               Cow position:
               chr25:3637028-3636671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               185, 198
               

               Conread position:
               72-506
               

               Cow position:
               chr25:33298961-33299395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr25:33157243-33156806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               81, 87
               

               Conread position:
               72-509
               

               Cow position:
               chr25:36844642-36844214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               289, 0
               

               Conread position:
               72-511
               

               Cow position:
               chr25:33530207-33530646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 239
               

               Conread position:
               73-327
               

               Cow position:
               chr25:34733946-34733692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               149, 145
               

               Conread position:
               73-354
               

               Cow position:
               chr25:34473822-34474100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               267, 42
               

               Conread position:
               73-395
               

               Cow position:
               chr25:36800946-36801268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               229, 238
               

               Conread position:
               73-401
               

               Cow position:
               chr25:34447085-34447413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               312, 306
               

               Conread position:
               73-423
               

               Cow position:
               chr25:33127865-33128215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               296, 291
               

               Conread position:
               73-423
               

               Cow position:
               chr25:34763393-34763740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               73-437
               

               Cow position:
               chr25:33506811-33507174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 253
               

               Conread position:
               73-440
               

               Cow position:
               chr25:33157326-33156959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               73-451
               

               Cow position:
               chr25:4657402-4657023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 0
               

               Conread position:
               73-467
               

               Cow position:
               chr25:34770145-34769752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               390, 0
               

               Conread position:
               73-468
               

               Cow position:
               chr25:33299046-33299441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-468
               

               Cow position:
               chr25:33299214-33299609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-469
               

               Cow position:
               chr25:24385101-24384705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               73-470
               

               Cow position:
               chr25:34770061-34769664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               73-471
               

               Cow position:
               chr25:22235892-22236290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-485
               

               Cow position:
               chr25:3663994-3664406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               73-485
               

               Cow position:
               chr25:25652839-25653251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-490
               

               Cow position:
               chr25:33298878-33299294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               414, 0
               

               Conread position:
               73-494
               

               Cow position:
               chr25:33529077-33529498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-495
               

               Cow position:
               chr25:24385185-24384763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               73-507
               

               Cow position:
               chr25:3664078-3664512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               420, 414
               

               Conread position:
               73-507
               

               Cow position:
               chr25:25652251-25652685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-508
               

               Cow position:
               chr25:34763309-34763741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               239, 145
               

               Conread position:
               73-509
               

               Cow position:
               chr25:33157410-33156974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 146
               

               Conread position:
               73-509
               

               Cow position:
               chr25:33298794-33299230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               73-509
               

               Cow position:
               chr25:34762892-34763325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               163, 170
               

               Conread position:
               73-509
               

               Cow position:
               chr25:34763141-34763574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr25:326644-327088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               220, 300
               

               Conread position:
               73-511
               

               Cow position:
               chr25:25652335-25652773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr25:25652503-25652941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               73-511
               

               Cow position:
               chr25:25652671-25653109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               73-511
               

               Cow position:
               chr25:25652755-25653193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-511
               

               Cow position:
               chr25:33530124-33530562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-512
               

               Cow position:
               chr25:34473654-34474091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 146
               

               Conread position:
               73-513
               

               Cow position:
               chr25:25652587-25653028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 324
               

               Conread position:
               73-514
               

               Cow position:
               chr25:34473570-34474008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 0
               

               Conread position:
               73-519
               

               Cow position:
               chr25:25652419-25652866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 40
               

               Conread position:
               73-525
               

               Cow position:
               chr25:3636415-3635960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 248
               

               Conread position:
               73-531
               

               Cow position:
               chr25:25652923-25653378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               397, 407
               

               Conread position:
               73-611
               

               Cow position:
               chr25:3664162-3664700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               488, 469
               

               Conread position:
               79-486
               

               Cow position:
               chr25:24385263-24384856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 58
               

               Conread position:
               79-511
               

               Cow position:
               chr25:24385347-24384915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               81-412
               

               Cow position:
               chr25:34734023-34733691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               81-479
               

               Cow position:
               chr25:34769885-34769487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-485
               

               Cow position:
               chr25:34447010-34447413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 77
               

               Conread position:
               82-509
               

               Cow position:
               chr25:33127790-33128217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               301, 294
               

               Conread position:
               83-516
               

               Cow position:
               chr25:4657476-4657045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 60
               

               Conread position:
               84-468
               

               Cow position:
               chr25:22940526-22940142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               98, 93
               

               Conread position:
               85-401
               

               Cow position:
               chr25:326488-326804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               85-522
               

               Cow position:
               chr25:23267421-23266990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               284, 122
               

               Conread position:
               87-509
               

               Cow position:
               chr25:33127711-33128133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               380, 373
               

               Conread position:
               89-499
               

               Cow position:
               chr25:3675987-3676397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 129
               

               Conread position:
               89-508
               

               Cow position:
               chr25:36801538-36801957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               400, 391
               

               Conread position:
               89-535
               

               Cow position:
               chr25:3663926-3664368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               422, 0
               

               Conread position:
               91-509
               

               Cow position:
               chr25:33299148-33299566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-511
               

               Cow position:
               chr25:25652187-25652605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-423
               

               Cow position:
               chr25:24398738-24398409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               99-462
               

               Cow position:
               chr25:22941372-22941009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               99-514
               

               Cow position:
               chr25:3636557-3636142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-511
               

               Cow position:
               chr25:24385406-24384999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               108-512
               

               Cow position:
               chr25:33529028-33529432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-513
               

               Cow position:
               chr25:34762844-34763246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               212, 216
               

               Conread position:
               117-469
               

               Cow position:
               chr25:22235852-22236204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               111, 122
               

               Conread position:
               118-472
               

               Cow position:
               chr25:33506772-33507126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 291
               

               Conread position:
               128-509
               

               Cow position:
               chr25:33157523-33157142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               363, 359
               

               Conread position:
               128-511
               

               Cow position:
               chr25:33127668-33128051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               363, 359
               

               Conread position:
               140-507
               

               Cow position:
               chr25:346494-346861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-450
               

               Cow position:
               chr25:36844655-36844348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-513
               

               Cow position:
               chr25:33298625-33298983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               355, 0
               

               Conread position:
               162-511
               

               Cow position:
               chr25:3663915-3664264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-507
               

               Cow position:
               chr25:34734023-34733680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               174-517
               

               Cow position:
               chr25:33529011-33529353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               180-495
               

               Cow position:
               chr25:24398736-24398421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 53
               

               Conread position:
               181-485
               

               Cow position:
               chr25:326501-326804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               128, 6
               

               Conread position:
               184-483
               

               Cow position:
               chr25:24385410-24385111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               225, 219
               

               Conread position:
               190-511
               

               Cow position:
               chr25:33157545-33157224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               193-468
               

               Cow position:
               chr25:22941362-22941087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               200-513
               

               Cow position:
               chr25:22235851-22236165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               201-468
               

               Cow position:
               chr25:3637070-3636800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 247
               

               Conread position:
               202-495
               

               Cow position:
               chr25:33506772-33507065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 270
               

               Conread position:
               202-511
               

               Cow position:
               chr25:22940492-22940183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 122
               

               Conread position:
               220-526
               

               Cow position:
               chr25:3636604-3636302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               265-511
               

               Cow position:
               chr25:326501-326746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               265-511
               

               Cow position:
               chr25:3675995-3676241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               277-514
               

               Cow position:
               chr25:33530076-33530313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               283-525
               

               Cow position:
               chr25:33506769-33507014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               330-511
               

               Cow position:
               chr25:25652172-25652353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               337-513
               

               Cow position:
               chr25:326488-326665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               624-787
               

               Cow position:
               chr25:3664680-3664835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               61-508
               

               Cow position:
               chr28:34696131-34696578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr28:11333907-11333470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-403
               

               Cow position:
               chr28:33210291-33210622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               270, 0
               

               Conread position:
               73-489
               

               Cow position:
               chr28:34695891-34696307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 174
               

               Conread position:
               79-354
               

               Cow position:
               chr28:33210381-33210657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               83-509
               

               Cow position:
               chr28:34696069-34696495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-514
               

               Cow position:
               chr28:34695985-34696416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-514
               

               Cow position:
               chr28:34695852-34696248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               135, 128
               

               Conread position:
               124-507
               

               Cow position:
               chr28:33210258-33210642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               301, 0
               

               Conread position:
               199-488
               

               Cow position:
               chr28:11333948-11333660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               184, 174
               

               Conread position:
               208-515
               

               Cow position:
               chr28:33210258-33210565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-511
               

               Cow position:
               chr3:20194641-20195139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               490, 56
               

               Conread position:
               66-401
               

               Cow position:
               chr3:20194946-20195281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-268
               

               Cow position:
               chr3:20194508-20194703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr3:20194784-20195221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 325
               

               Conread position:
               73-507
               

               Cow position:
               chr3:20194869-20195303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 248
               

               Conread position:
               89-352
               

               Cow position:
               chr3:20194441-20194703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               255, 230
               

               Conread position:
               175-423
               

               Cow position:
               chr3:63430872-63431120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               202-436
               

               Cow position:
               chr3:20194470-20194706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               206, 201
               

               Conread position:
               226-485
               

               Cow position:
               chr3:20194411-20194669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               336-511
               

               Cow position:
               chr3:20194436-20194611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-509
               

               Cow position:
               chr4:65703047-65702547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               45-528
               

               Cow position:
               chr4:65261685-65261200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               306
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               47-437
               

               Cow position:
               chr4:65702840-65702452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               63-514
               

               Cow position:
               chr4:65703616-65703163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 255
               

               Conread position:
               69-414
               

               Cow position:
               chr4:65121760-65122105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-508
               

               Cow position:
               chr4:65121592-65122031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-416
               

               Cow position:
               chr4:65350441-65350784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               153, 46
               

               Conread position:
               70-467
               

               Cow position:
               chr4:65121677-65122074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 163
               

               Conread position:
               70-514
               

               Cow position:
               chr4:65350189-65350630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               162, 148
               

               Conread position:
               72-347
               

               Cow position:
               chr4:65146482-65146757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 72
               

               Conread position:
               72-348
               

               Cow position:
               chr4:65494705-65494429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               72-352
               

               Cow position:
               chr4:65703269-65702992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               151, 103
               

               Conread position:
               72-430
               

               Cow position:
               chr4:65494789-65494431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 153
               

               Conread position:
               72-469
               

               Cow position:
               chr4:65350359-65350753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               331, 92
               

               Conread position:
               72-471
               

               Cow position:
               chr4:65261574-65261175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               66, 76
               

               Conread position:
               72-471
               

               Cow position:
               chr4:65494879-65494474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 250
               

               Conread position:
               73-255
               

               Cow position:
               chr4:65157994-65158176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               159, 145
               

               Conread position:
               73-428
               

               Cow position:
               chr4:65261489-65261134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               240, 233
               

               Conread position:
               73-430
               

               Cow position:
               chr4:65703352-65702998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               162, 154
               

               Conread position:
               73-511
               

               Cow position:
               chr4:65494962-65494518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               73-513
               

               Cow position:
               chr4:65350108-65350546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               236, 253
               

               Conread position:
               75-474
               

               Cow position:
               chr4:65146402-65146798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               149, 14
               

               Conread position:
               79-512
               

               Cow position:
               chr4:65350282-65350711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 154
               

               Conread position:
               91-506
               

               Cow position:
               chr4:65702881-65702466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               91-507
               

               Cow position:
               chr4:65350042-65350458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               126, 142
               

               Conread position:
               94-511
               

               Cow position:
               chr4:65703667-65703250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 51
               

               Conread position:
               97-511
               

               Cow position:
               chr4:65495022-65494602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 136
               

               Conread position:
               101-345
               

               Cow position:
               chr4:65157938-65158182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               108-345
               

               Cow position:
               chr4:65121154-65121391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 125
               

               Conread position:
               139-510
               

               Cow position:
               chr4:65157804-65158179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               147-511
               

               Cow position:
               chr4:65121586-65121950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               175-490
               

               Cow position:
               chr4:65495028-65494708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               175, 240
               

               Conread position:
               178-344
               

               Cow position:
               chr4:65146926-65147093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               184-391
               

               Cow position:
               chr4:65121146-65121353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 49
               

               Conread position:
               187-513
               

               Cow position:
               chr4:65121542-65121869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               192-472
               

               Cow position:
               chr4:65146434-65146714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 127
               

               Conread position:
               202-430
               

               Cow position:
               chr4:65546412-65546185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               264-511
               

               Cow position:
               chr4:65495023-65494770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 136
               

               Conread position:
               267-472
               

               Cow position:
               chr4:65495293-65495088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-508
               

               Cow position:
               chr4:65121146-65121386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               276-507
               

               Cow position:
               chr4:65146434-65146665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               198, 207
               

               Conread position:
               282-522
               

               Cow position:
               chr4:65546416-65546176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-514
               

               Cow position:
               chr6:49428183-49428648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               56-472
               

               Cow position:
               chr6:49340702-49341118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               60-514
               

               Cow position:
               chr6:49428950-49429404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-514
               

               Cow position:
               chr6:49428615-49429068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 164
               

               Conread position:
               62-515
               

               Cow position:
               chr6:49429035-49429490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 53
               

               Conread position:
               67-511
               

               Cow position:
               chr6:49428369-49428813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 342
               

               Conread position:
               70-384
               

               Cow position:
               chr6:49396605-49396919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-471
               

               Cow position:
               chr6:49340884-49341285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-479
               

               Cow position:
               chr6:49340800-49341209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-485
               

               Cow position:
               chr6:49340464-49340879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-511
               

               Cow position:
               chr6:49428540-49428981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 240
               

               Conread position:
               70-511
               

               Cow position:
               chr6:49428876-49429317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               423, 417
               

               Conread position:
               71-486
               

               Cow position:
               chr6:49340549-49340965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               410, 0
               

               Conread position:
               71-511
               

               Cow position:
               chr6:49428289-49428729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-479
               

               Cow position:
               chr6:49396523-49396930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr6:49396439-49396876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-511
               

               Cow position:
               chr6:49428794-49429233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-514
               

               Cow position:
               chr6:49428711-49429152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-516
               

               Cow position:
               chr6:49396272-49396715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               83-514
               

               Cow position:
               chr6:49428469-49428900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 136
               

               Conread position:
               72-498
               

               Cow position:
               chr7:28846653-28847079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               238, 231
               

               Conread position:
               72-507
               

               Cow position:
               chr7:28846569-28847004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-401
               

               Cow position:
               chr7:18390477-18390805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               310, 306
               

               Conread position:
               73-423
               

               Cow position:
               chr7:18390393-18390743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-436
               

               Cow position:
               chr7:12293663-12294024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               351, 0
               

               Conread position:
               73-450
               

               Cow position:
               chr7:28846738-28847114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               73-485
               

               Cow position:
               chr7:28846486-28846898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               405, 398
               

               Conread position:
               73-495
               

               Cow position:
               chr7:12293495-12293917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 335
               

               Conread position:
               73-509
               

               Cow position:
               chr7:18390225-18390661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 57
               

               Conread position:
               73-517
               

               Cow position:
               chr7:12293327-12293771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 246
               

               Conread position:
               73-525
               

               Cow position:
               chr7:12293411-12293866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               85-508
               

               Cow position:
               chr7:18390321-18390744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               357, 361
               

               Conread position:
               99-511
               

               Cow position:
               chr7:12293269-12293681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               187-509
               

               Cow position:
               chr7:28846432-28846754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               135, 139
               

               Conread position:
               68-472
               

               Cow position:
               chr8:55580963-55581368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               72-486
               

               Cow position:
               chrX:14181496-14181082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               267
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               154, 146
               

               Conread position:
               73-414
               

               Cow position:
               chrX:13826633-13826292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-482
               

               Cow position:
               chrX:13826549-13826143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               386, 0
               

               Conread position:
               73-495
               

               Cow position:
               chrX:13826801-13826379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               310, 302
               

               Conread position:
               73-507
               

               Cow position:
               chrX:14181327-14180893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-508
               

               Cow position:
               chrX:13826717-13826282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-508
               

               Cow position:
               chrX:14181411-14180976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-517
               

               Cow position:
               chrX:14181579-14181135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-511
               

               Cow position:
               chrX:13826801-13826447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               309, 300
Conread position:	73-479
Cow position:	chr10:8996447-8996041 (view UCSC Genome Browser custom track)
Alignm length:	408
Alignm identity:	248
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	164, 170
Conread position:	73-514
Cow position:	chr10:8996699-8996258 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	264
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	164, 170
Conread position:	81-485
Cow position:	chr10:21939175-21938771 (view UCSC Genome Browser custom track)
Alignm length:	405
Alignm identity:	241
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	82-509
Cow position:	chr10:8996606-8996179 (view UCSC Genome Browser custom track)
Alignm length:	429
Alignm identity:	254
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	71, 77
Conread position:	72-386
Cow position:	chr11:74554539-74554225 (view UCSC Genome Browser custom track)
Alignm length:	315
Alignm identity:	193
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	72-509
Cow position:	chr11:74554707-74554270 (view UCSC Genome Browser custom track)
Alignm length:	438
Alignm identity:	266
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	0, 0
Conread position:	73-339
Cow position:	chr11:50368543-50368277 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	183
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	161, 155
Conread position:	73-470
Cow position:	chr11:74554622-74554225 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	240
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	0, 0
Conread position:	73-509
Cow position:	chr11:74554790-74554354 (view UCSC Genome Browser custom track)
Alignm length:	438
Alignm identity:	269
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	310, 306
Conread position:	96-514
Cow position:	chr11:74555103-74554685 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	244
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	57, 63
Conread position:	109-451
Cow position:	chr11:50368591-50368245 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	220
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	320, 0
Conread position:	181-509
Cow position:	chr11:74555102-74554774 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	204
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	56, 62
Conread position:	202-507
Cow position:	chr11:50368582-50368277 (view UCSC Genome Browser custom track)
Alignm length:	307
Alignm identity:	203
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	125, 120
Conread position:	282-513
Cow position:	chr11:50368586-50368354 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	152
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	121, 127
Conread position:	60-514
Cow position:	chr13:24162872-24163326 (view UCSC Genome Browser custom track)
Alignm length:	458
Alignm identity:	279
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	331, 335
Conread position:	60-525
Cow position:	chr13:22124978-22125440 (view UCSC Genome Browser custom track)
Alignm length:	466
Alignm identity:	292
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	444, 0
Conread position:	62-498
Cow position:	chr13:22125314-22125752 (view UCSC Genome Browser custom track)
Alignm length:	442
Alignm identity:	269
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	7, 150
Conread position:	68-510
Cow position:	chr13:22124818-22125260 (view UCSC Genome Browser custom track)
Alignm length:	445
Alignm identity:	281
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	138, 145
Conread position:	70-403
Cow position:	chr13:24163302-24163635 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	207
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	138, 143
Conread position:	72-495
Cow position:	chr13:22125242-22125665 (view UCSC Genome Browser custom track)
Alignm length:	426
Alignm identity:	266
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	226, 222