Cow genome map
| Conread name: | Ss1.1-rebs34c_j9.5 |
| Conread position: | 677-815 |
| Cow position: | chr10:9012863-9012726 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 678-813 |
| Cow position: | chr10:9028012-9028146 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 678-813 |
| Cow position: | chr13:22118987-22119121 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 678-813 |
| Cow position: | chr13:24158259-24158393 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 677-814 |
| Cow position: | chr14:3064399-3064263 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 679-821 |
| Cow position: | chr14:25871858-25871999 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 679-824 |
| Cow position: | chr14:25888961-25889105 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 679-827 |
| Cow position: | chr14:25855589-25855736 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 679-833 |
| Cow position: | chr14:25832146-25832299 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 688-813 |
| Cow position: | chr14:3131092-3130968 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 688-814 |
| Cow position: | chr14:25776410-25776535 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 691-814 |
| Cow position: | chr14:25906778-25906900 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 677-818 |
| Cow position: | chr17:44465943-44466082 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 677-811 |
| Cow position: | chr18:55506811-55506678 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 677-811 |
| Cow position: | chr18:55531947-55531814 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 677-814 |
| Cow position: | chr18:53618505-53618369 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 677-824 |
| Cow position: | chr18:50095779-50095924 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 678-814 |
| Cow position: | chr18:49038987-49038852 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 678-814 |
| Cow position: | chr18:56268546-56268411 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 678-814 |
| Cow position: | chr18:56332267-56332132 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 678-816 |
| Cow position: | chr18:52421796-52421933 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 678-816 |
| Cow position: | chr18:52442015-52442152 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 678-817 |
| Cow position: | chr18:44411449-44411311 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 678-817 |
| Cow position: | chr18:51867650-51867788 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 678-843 |
| Cow position: | chr18:51796385-51796221 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 678-843 |
| Cow position: | chr18:51819673-51819509 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 678-852 |
| Cow position: | chr18:51844477-51844303 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 150, 37 |
| Conread position: | 678-853 |
| Cow position: | chr18:41193465-41193641 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 679-816 |
| Cow position: | chr18:42728293-42728157 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 679-822 |
| Cow position: | chr18:56288182-56288040 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 680-815 |
| Cow position: | chr18:43143696-43143829 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 680-843 |
| Cow position: | chr18:1414855-1415017 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 155, 11 |
| Conread position: | 688-814 |
| Cow position: | chr18:53646070-53645945 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 688-814 |
| Cow position: | chr18:55954147-55954272 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 688-816 |
| Cow position: | chr18:50653443-50653316 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 698-823 |
| Cow position: | chr18:50077726-50077849 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 699-824 |
| Cow position: | chr18:50267462-50267585 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 699-824 |
| Cow position: | chr18:50278867-50278990 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 679-822 |
| Cow position: | chr19:20638202-20638060 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 677-814 |
| Cow position: | chr22:12541194-12541330 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 678-814 |
| Cow position: | chr22:11699013-11699148 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 678-815 |
| Cow position: | chr22:14439807-14439943 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 678-823 |
| Cow position: | chr22:14465233-14465377 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 677-815 |
| Cow position: | chr25:36847444-36847307 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 678-815 |
| Cow position: | chr25:33295401-33295537 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 688-831 |
| Cow position: | chr25:23415305-23415445 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 693-815 |
| Cow position: | chr25:36799455-36799576 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 667-818 |
| Cow position: | chr28:7735910-7736058 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 18-169 |
| Cow position: | chr3:68013389-68013537 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 186-594 |
| Cow position: | chr3:68013534-68013947 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 462-594 |
| Cow position: | chr3:68031563-68031695 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-847 |
| Cow position: | chr3:68040897-68041070 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 40 |
| Conread position: | 679-875 |
| Cow position: | chr3:68022140-68022335 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 678-849 |
| Cow position: | chr6:49358204-49358375 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 157, 36 |
| Conread position: | 679-813 |
| Cow position: | chr6:49387729-49387862 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 679-839 |
| Cow position: | chr6:49419712-49419869 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 679-813 |
| Cow position: | chr7:11488091-11488224 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 679-813 |
| Cow position: | chr7:18387052-18387185 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 693-833 |
| Cow position: | chr7:42881413-42881274 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 678-833 |
| Cow position: | chr8:45148252-45148405 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 678-815 |
| Cow position: | chrX:29072746-29072610 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 684-826 |
| Cow position: | chrX:25336774-25336634 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 687-813 |
| Cow position: | chrX:29040701-29040826 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |