Cow genome map
| Conread name: | Ss1.1-recc2803c_e10.5.5 |
| Conread position: | 646-942 |
| Cow position: | chr15:19656654-19656367 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 952-1243 |
| Cow position: | chr15:19654541-19654254 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 70-290 |
| Cow position: | chr16:17738941-17738745 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 200, 28 |
| Conread position: | 276-1270 |
| Cow position: | chr16:17738547-17737573 (view UCSC Genome Browser custom track) |
| Alignm length: | 1020 |
| Alignm identity: | 727 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 57 |
| Conread position: | 48-213 |
| Cow position: | chr19:6151535-6151691 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 295-736 |
| Cow position: | chr19:6151962-6152394 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 13 |
| Conread position: | 827-1065 |
| Cow position: | chr19:6152571-6152802 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 32 |
| Conread position: | 1042-1441 |
| Cow position: | chr19:6152935-6153315 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 132-661 |
| Cow position: | chr2:13167783-13167259 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 262 |
| Conread position: | 132-621 |
| Cow position: | chr22:28774568-28774111 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 185 |
| Conread position: | 133-745 |
| Cow position: | chr24:17814067-17813467 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 259 |
| Conread position: | 109-739 |
| Cow position: | chr3:72090166-72089553 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 160 |
| Conread position: | 144-634 |
| Cow position: | chr3:79778605-79779089 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 742-1290 |
| Cow position: | chr3:18142134-18142701 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 36 |
| Conread position: | 1725-2350 |
| Cow position: | chr3:39080285-39079676 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 210-776 |
| Cow position: | chr4:5500975-5501538 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 466, 0 |
| Conread position: | 5-660 |
| Cow position: | chr5:21062305-21062950 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 100 |
| Conread position: | 768-1256 |
| Cow position: | chr5:21063492-21063987 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 1275-1605 |
| Cow position: | chr5:21064287-21064615 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 1653-2311 |
| Cow position: | chr5:21064616-21065258 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 114 |
| Conread position: | 44-607 |
| Cow position: | chr7:34661811-34662335 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 109 |
| Conread position: | 51-564 |
| Cow position: | chr7:67036604-67036116 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 559-763 |
| Cow position: | chr7:67035840-67035639 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 701-1261 |
| Cow position: | chr7:67035644-67035107 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 97 |
| Conread position: | 739-1267 |
| Cow position: | chr7:34662362-34662876 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 68 |
| Conread position: | 133-736 |
| Cow position: | chr8:29274504-29275091 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 44 |
| Conread position: | 146-296 |
| Cow position: | chr8:3188816-3188666 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-442 |
| Cow position: | chr8:3188414-3188267 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 444-618 |
| Cow position: | chr8:3188181-3188007 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 616-776 |
| Cow position: | chr8:3187514-3187357 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 128-1272 |
| Cow position: | chr9:62394269-62393123 (view UCSC Genome Browser custom track) |
| Alignm length: | 1158 |
| Alignm identity: | 1083 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 132-733 |
| Cow position: | chrX:27079969-27080538 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 137-296 |
| Cow position: | chrX:11867530-11867371 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 450-618 |
| Cow position: | chrX:11866456-11866288 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |