Cow genome map
| Conread name: | Ss1.1-reep35c_f1.5 |
| Conread position: | 246-438 |
| Cow position: | chr1:90247804-90247990 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 204-414 |
| Cow position: | chr10:16093597-16093807 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-414 |
| Cow position: | chr10:52889302-52889512 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-414 |
| Cow position: | chr11:32100321-32100531 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-415 |
| Cow position: | chr11:17224730-17224519 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-414 |
| Cow position: | chr11:29800921-29801129 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-382 |
| Cow position: | chr12:42176131-42176308 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 211-605 |
| Cow position: | chr13:30517004-30517400 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 74 |
| Conread position: | 245-412 |
| Cow position: | chr13:6601016-6601182 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 257-438 |
| Cow position: | chr13:47248442-47248262 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 248-606 |
| Cow position: | chr14:41871014-41871383 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 206-438 |
| Cow position: | chr15:8752123-8752351 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 204-321 |
| Cow position: | chr16:31296833-31296713 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 204-451 |
| Cow position: | chr16:42031076-42030834 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 253-622 |
| Cow position: | chr16:37718192-37718568 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 168 |
| Conread position: | 204-579 |
| Cow position: | chr17:45580541-45580166 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 215 |
| Conread position: | 220-449 |
| Cow position: | chr17:36633990-36633768 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 174-416 |
| Cow position: | chr19:37643377-37643613 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 204-546 |
| Cow position: | chr19:31270870-31271211 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 142 |
| Conread position: | 195-612 |
| Cow position: | chr2:40228102-40228527 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 70 |
| Conread position: | 199-450 |
| Cow position: | chr2:72488170-72488415 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 201-608 |
| Cow position: | chr2:76351275-76351698 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 217 |
| Conread position: | 205-366 |
| Cow position: | chr2:40225508-40225667 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 211-451 |
| Cow position: | chr2:59510863-59511094 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 236-599 |
| Cow position: | chr2:6179400-6179038 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 248, 28 |
| Conread position: | 257-408 |
| Cow position: | chr2:18052777-18052930 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 135 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 207-603 |
| Cow position: | chr21:34624509-34624112 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 238-416 |
| Cow position: | chr21:22723864-22723687 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 211-441 |
| Cow position: | chr22:39311343-39311572 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 224-451 |
| Cow position: | chr22:36443538-36443315 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 30 |
| Conread position: | 206-595 |
| Cow position: | chr25:28981825-28982221 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 216 |
| Conread position: | 203-498 |
| Cow position: | chr26:32508489-32508196 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 218 |
| Conread position: | 203-605 |
| Cow position: | chr28:11240602-11240200 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 205 |
| Conread position: | 210-599 |
| Cow position: | chr28:1297261-1297643 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 119, 6 |
| Conread position: | 196-421 |
| Cow position: | chr3:85349067-85348844 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 9 |
| Conread position: | 204-629 |
| Cow position: | chr3:408007-407577 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 98 |
| Conread position: | 204-414 |
| Cow position: | chr6:1640291-1640501 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |