Cow genome map
| Conread name: | Ss1.1-reje15b_p17.5.5 |
| Conread position: | 381-807 |
| Cow position: | chr11:39497667-39498082 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 603-773 |
| Cow position: | chr11:15620758-15620923 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 380-802 |
| Cow position: | chr13:11745263-11745679 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 404-575 |
| Cow position: | chr13:57317701-57317872 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-840 |
| Cow position: | chr13:54646199-54645776 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 105 |
| Conread position: | 289-825 |
| Cow position: | chr14:2794468-2794982 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 414-730 |
| Cow position: | chr17:44555857-44555554 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 383-738 |
| Cow position: | chr18:36287244-36287596 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 33 |
| Conread position: | 642-828 |
| Cow position: | chr18:1582065-1581891 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 91 |
| Conread position: | 380-807 |
| Cow position: | chr19:12317370-12316957 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 384-810 |
| Cow position: | chr2:30121595-30121176 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 476-807 |
| Cow position: | chr2:4968398-4968073 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 18 |
| Conread position: | 521-727 |
| Cow position: | chr2:33405070-33404865 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 380-824 |
| Cow position: | chr24:21199437-21199859 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 380-866 |
| Cow position: | chr26:8119916-8120373 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 380-651 |
| Cow position: | chr27:23329049-23329318 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 380-821 |
| Cow position: | chr3:63842467-63842033 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 480-690 |
| Cow position: | chr3:70822518-70822309 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 157, 41 |
| Conread position: | 641-773 |
| Cow position: | chr3:58949854-58949983 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 119 |
| Conread position: | 380-770 |
| Cow position: | chr7:533048-533419 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-488 |
| Cow position: | chr8:20217208-20217720 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 163 |
| Conread position: | 411-776 |
| Cow position: | chr8:32167013-32167364 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 488-614 |
| Cow position: | chr8:20220795-20220921 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 119 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 612-726 |
| Cow position: | chr8:20222033-20222147 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 382-639 |
| Cow position: | chr9:35287193-35287441 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 630-777 |
| Cow position: | chr9:35287695-35287834 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 381-809 |
| Cow position: | chrX:39396158-39396562 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |