Cow genome map
| Conread name: | Ss1.1-rese19c_c15.5 |
| Conread position: | 1-845 |
| Cow position: | chr1:29801163-29802023 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 702 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 155 |
| Conread position: | 77-583 |
| Cow position: | chr1:65388672-65388140 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 350 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 239-765 |
| Cow position: | chr1:71443734-71443202 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 334 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 249-595 |
| Cow position: | chr10:23409050-23409412 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 124 |
| Conread position: | 249-694 |
| Cow position: | chr10:15488739-15488269 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 181 |
| Conread position: | 249-583 |
| Cow position: | chr11:43512788-43513140 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 211 |
| Conread position: | 249-595 |
| Cow position: | chr11:19062237-19062599 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 180 |
| Conread position: | 249-583 |
| Cow position: | chr13:18331198-18331551 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 249-593 |
| Cow position: | chr13:49975584-49975223 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 187 |
| Conread position: | 234-590 |
| Cow position: | chr14:17489542-17489915 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 249-765 |
| Cow position: | chr14:29045897-29046439 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 345 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 186 |
| Conread position: | 248-593 |
| Cow position: | chr15:6614800-6614439 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 181 |
| Conread position: | 249-583 |
| Cow position: | chr17:29302774-29302419 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 249-583 |
| Cow position: | chr18:23702866-23703217 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 249-583 |
| Cow position: | chr18:29864390-29864741 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 249-593 |
| Cow position: | chr18:16146793-16147148 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 172 |
| Conread position: | 253-522 |
| Cow position: | chr18:31250249-31250517 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 249-593 |
| Cow position: | chr19:5899284-5899645 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 181 |
| Conread position: | 249-592 |
| Cow position: | chr2:32862937-32863291 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 249-593 |
| Cow position: | chr2:26923092-26922735 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 249-583 |
| Cow position: | chr20:13765081-13764732 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 239-593 |
| Cow position: | chr21:28257725-28257359 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 249-583 |
| Cow position: | chr21:5019441-5019090 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 122 |
| Conread position: | 249-583 |
| Cow position: | chr24:146396-146747 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 249-593 |
| Cow position: | chr24:40550833-40550475 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 249-583 |
| Cow position: | chr25:18887568-18887919 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 135 |
| Conread position: | 249-599 |
| Cow position: | chr25:32578725-32579090 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 218-590 |
| Cow position: | chr26:12586336-12586725 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 155 |
| Conread position: | 249-596 |
| Cow position: | chr27:9331868-9331506 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 77-628 |
| Cow position: | chr28:22230944-22231516 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 359 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 249-531 |
| Cow position: | chr3:66622263-66621970 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 249-593 |
| Cow position: | chr3:64026085-64026446 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 249-583 |
| Cow position: | chr4:43317794-43318131 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 249-593 |
| Cow position: | chr4:13495187-13494827 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 249-593 |
| Cow position: | chr4:14387672-14387317 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 182 |
| Conread position: | 249-593 |
| Cow position: | chr4:41956620-41956258 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 181 |
| Conread position: | 249-593 |
| Cow position: | chr4:41960756-41960394 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 181 |
| Conread position: | 249-583 |
| Cow position: | chr6:34890035-34890385 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 249-593 |
| Cow position: | chr6:329369-329730 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 249-591 |
| Cow position: | chr7:25441964-25441611 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 193 |
| Conread position: | 251-593 |
| Cow position: | chr7:27458556-27458904 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 253-602 |
| Cow position: | chr7:55040303-55040670 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 254-590 |
| Cow position: | chr8:46322018-46322370 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 249-592 |
| Cow position: | chr9:30828764-30828406 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 249-583 |
| Cow position: | chrX:16701610-16701273 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 249-593 |
| Cow position: | chrX:11147401-11147761 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 104 |