Cow genome map
| Conread name: | Ss1.1-rese40c_i20.5 |
| Conread position: | 2-995 |
| Cow position: | chr1:5834292-5833292 (view UCSC Genome Browser custom track) |
| Alignm length: | 1021 |
| Alignm identity: | 865 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 248 |
| Conread position: | 833-1002 |
| Cow position: | chr1:94031190-94031017 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 838-1000 |
| Cow position: | chr1:33174832-33175001 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 838-1002 |
| Cow position: | chr1:42278841-42278674 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 841-999 |
| Cow position: | chr1:93887220-93887062 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 822-1003 |
| Cow position: | chr10:5289275-5289461 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 828-1001 |
| Cow position: | chr10:52987406-52987228 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 833-1000 |
| Cow position: | chr10:53681346-53681504 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 833-1002 |
| Cow position: | chr10:10089406-10089580 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 837-1002 |
| Cow position: | chr10:51099878-51099711 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 837-1005 |
| Cow position: | chr10:11941298-11941126 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 848-1001 |
| Cow position: | chr10:29853110-29852954 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 858-1002 |
| Cow position: | chr10:46540014-46540157 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 780-1002 |
| Cow position: | chr11:17090799-17091019 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 7 |
| Conread position: | 826-1002 |
| Cow position: | chr13:61346275-61346455 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 831-1008 |
| Cow position: | chr14:3693850-3694033 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 838-1000 |
| Cow position: | chr14:39713416-39713249 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 841-1005 |
| Cow position: | chr14:6081956-6082121 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 833-1005 |
| Cow position: | chr15:24664138-24663965 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 833-1002 |
| Cow position: | chr16:19045205-19045034 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 834-1002 |
| Cow position: | chr16:24936217-24936049 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 107 |
| Conread position: | 842-1002 |
| Cow position: | chr16:53819791-53819949 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 838-1001 |
| Cow position: | chr17:43483884-43484043 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 833-1001 |
| Cow position: | chr18:9908419-9908590 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 833-1002 |
| Cow position: | chr18:8649063-8648890 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 833-1008 |
| Cow position: | chr18:18647491-18647670 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 810-1002 |
| Cow position: | chr19:12563294-12563096 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 833-1002 |
| Cow position: | chr19:54204496-54204326 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 837-1002 |
| Cow position: | chr19:25584926-25585097 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 814-1001 |
| Cow position: | chr2:66057022-66056829 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 832-1002 |
| Cow position: | chr2:72102698-72102873 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 833-1002 |
| Cow position: | chr2:39603015-39602841 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 833-1004 |
| Cow position: | chr2:57570115-57570284 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 837-1006 |
| Cow position: | chr20:27905272-27905446 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 841-1003 |
| Cow position: | chr20:33738124-33737957 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 849-1014 |
| Cow position: | chr20:33793476-33793311 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 828-1002 |
| Cow position: | chr21:38003240-38003417 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 814-1008 |
| Cow position: | chr22:906621-906423 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 837-1002 |
| Cow position: | chr23:2115025-2114855 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 829-1005 |
| Cow position: | chr24:44049807-44049633 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 815-1005 |
| Cow position: | chr25:11995657-11995463 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 137 |
| Conread position: | 820-1001 |
| Cow position: | chr25:22450320-22450502 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 828-1001 |
| Cow position: | chr25:14905195-14905014 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 831-1002 |
| Cow position: | chr25:5583804-5583625 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 837-1002 |
| Cow position: | chr25:20220208-20220377 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 27 |
| Conread position: | 820-996 |
| Cow position: | chr26:17076975-17077150 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 809-1002 |
| Cow position: | chr27:27183796-27183603 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 832-1002 |
| Cow position: | chr28:11468919-11468747 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 837-1002 |
| Cow position: | chr28:1805456-1805616 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 843-998 |
| Cow position: | chr28:34779193-34779353 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 829-1002 |
| Cow position: | chr29:38336492-38336670 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 855-1001 |
| Cow position: | chr29:16395587-16395438 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 814-1001 |
| Cow position: | chr3:17070021-17069833 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 832-1001 |
| Cow position: | chr3:76143364-76143544 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 833-996 |
| Cow position: | chr3:64714840-64714673 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 837-1005 |
| Cow position: | chr3:66029851-66029677 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 833-993 |
| Cow position: | chr4:35016824-35016660 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 837-1002 |
| Cow position: | chr4:46214893-46214726 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 837-1007 |
| Cow position: | chr4:38412109-38411933 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 833-1000 |
| Cow position: | chr5:37401734-37401907 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 833-1003 |
| Cow position: | chr5:30357327-30357504 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 837-1002 |
| Cow position: | chr5:38874500-38874331 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 817-1001 |
| Cow position: | chr6:41417144-41416959 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 837-1002 |
| Cow position: | chr6:4641237-4641407 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 826-1004 |
| Cow position: | chr7:18436850-18436668 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 832-995 |
| Cow position: | chr8:27116496-27116663 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 837-998 |
| Cow position: | chr8:14601315-14601481 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 837-1003 |
| Cow position: | chr8:34573067-34572895 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 832-1000 |
| Cow position: | chrX:41193486-41193658 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 833-995 |
| Cow position: | chrX:5139192-5139035 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |