Cow genome map
| Conread name: | Ss1.1-rfat0107_a23.5 |
| Conread position: | 228-652 |
| Cow position: | chr1:6428295-6428701 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 385, 37 |
| Conread position: | 8-660 |
| Cow position: | chr10:58436746-58436093 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 529, 0 |
| Conread position: | 15-230 |
| Cow position: | chr10:50087426-50087641 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-605 |
| Cow position: | chr10:50087707-50087839 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-132 |
| Cow position: | chr11:74548198-74548329 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 127 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-305 |
| Cow position: | chr11:74550426-74550525 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-392 |
| Cow position: | chr11:74550834-74550923 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-475 |
| Cow position: | chr11:74551494-74551581 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-587 |
| Cow position: | chr11:74551919-74552032 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-304 |
| Cow position: | chr13:43715186-43715462 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 14-646 |
| Cow position: | chr13:55456207-55456832 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 338-522 |
| Cow position: | chr13:43715465-43715648 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 246-526 |
| Cow position: | chr14:21836517-21836236 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 192, 77 |
| Conread position: | 28-610 |
| Cow position: | chr16:29457275-29457829 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 520, 78 |
| Conread position: | 2-107 |
| Cow position: | chr18:21688191-21688086 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-598 |
| Cow position: | chr18:23496143-23496706 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 114-643 |
| Cow position: | chr18:21687861-21687331 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 491, 256 |
| Conread position: | 8-653 |
| Cow position: | chr19:32618091-32618723 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 594, 157 |
| Conread position: | 8-106 |
| Cow position: | chr2:60900994-60901092 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-638 |
| Cow position: | chr20:9316149-9316791 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 0 |
| Conread position: | 14-669 |
| Cow position: | chr21:49610492-49611151 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 40 |
| Conread position: | 109-646 |
| Cow position: | chr24:30807227-30807772 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 496, 0 |
| Conread position: | 16-581 |
| Cow position: | chr25:33287942-33287383 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 123 |
| Conread position: | 351-669 |
| Cow position: | chr25:731462-731136 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 0 |
| Conread position: | 15-612 |
| Cow position: | chr27:23776899-23776293 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 175-641 |
| Cow position: | chr28:20978125-20978583 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 8-253 |
| Cow position: | chr3:24917952-24917704 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 10-643 |
| Cow position: | chr3:44880532-44879893 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 83 |
| Conread position: | 14-643 |
| Cow position: | chr3:40150-39528 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 343 |
| Conread position: | 8-626 |
| Cow position: | chr7:5733659-5733041 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 594, 398 |
| Conread position: | 23-602 |
| Cow position: | chr8:22039076-22039600 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 82 |