Cow genome map
| Conread name: | Ss1.1-rfat0140_c19.5 |
| Conread position: | 1-732 |
| Cow position: | chr1:35067027-35067757 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 655 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 600 |
| Conread position: | 1-746 |
| Cow position: | chr1:44816457-44815718 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 662 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 170 |
| Conread position: | 1-673 |
| Cow position: | chr10:68529279-68529957 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 206 |
| Conread position: | 70-521 |
| Cow position: | chr10:67618607-67619046 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 36 |
| Conread position: | 1-315 |
| Cow position: | chr11:16292685-16292364 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 353-603 |
| Cow position: | chr11:16292354-16292106 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 106 |
| Conread position: | 1-704 |
| Cow position: | chr12:38109557-38108857 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 636 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 600 |
| Conread position: | 254-592 |
| Cow position: | chr12:18286092-18285774 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 34 |
| Conread position: | 126-680 |
| Cow position: | chr13:40819900-40820447 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 154 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 537, 379 |
| Conread position: | 1-334 |
| Cow position: | chr15:5461930-5462272 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 418-520 |
| Cow position: | chr15:5462640-5462742 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-716 |
| Cow position: | chr17:29061044-29061756 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 646 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 600 |
| Conread position: | 1-530 |
| Cow position: | chr2:19713804-19713290 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 18 |
| Conread position: | 517-715 |
| Cow position: | chr2:19713126-19712929 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 48 |
| Conread position: | 91-485 |
| Cow position: | chr21:46764614-46764219 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 0 |
| Conread position: | 518-708 |
| Cow position: | chr21:46764213-46764023 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 87 |
| Conread position: | 1-624 |
| Cow position: | chr25:31589810-31590436 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 174 |
| Conread position: | 15-546 |
| Cow position: | chr25:23743628-23743137 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 500, 49 |
| Conread position: | 1-705 |
| Cow position: | chr26:13880842-13881543 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 619 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 622, 167 |
| Conread position: | 30-720 |
| Cow position: | chr28:14969608-14968924 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 633, 174 |
| Conread position: | 1-459 |
| Cow position: | chr3:46085366-46085792 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-699 |
| Cow position: | chr3:38042906-38042210 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 355 |
| Conread position: | 3-701 |
| Cow position: | chr3:64424840-64424160 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 1-586 |
| Cow position: | chr4:57583781-57583215 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 33 |
| Conread position: | 73-714 |
| Cow position: | chr4:27506328-27506958 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 103 |
| Conread position: | 451-578 |
| Cow position: | chr5:3011635-3011760 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 58-174 |
| Cow position: | chr6:30740013-30740129 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-699 |
| Cow position: | chr6:41100756-41100217 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 423 |
| Conread position: | 174-271 |
| Cow position: | chr6:30740717-30740814 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-404 |
| Cow position: | chr6:30744063-30744197 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 127 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-484 |
| Cow position: | chr6:30744943-30745025 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 483-602 |
| Cow position: | chr6:30745230-30745349 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 113 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-733 |
| Cow position: | chr7:35281473-35280745 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 652 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 600 |