Cow genome map

Conread name: Ss1.1-rfcc04b_m13.5

Conread position: 2-205
Cow position: chr11:50368480-50368277 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-281
Cow position: chr11:74554892-74554616 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 12-280
Cow position: chr11:50368554-50368286 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 61

Conread position: 13-281
Cow position: chr11:74554800-74554532 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 20-267
Cow position: chr11:74554709-74554462 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 23-280
Cow position: chr11:74554958-74554701 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 57

Conread position: 55-289
Cow position: chr11:50368595-50368361 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 156, 164

Conread position: 8-289
Cow position: chr13:22125144-22125425 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 246, 250

Conread position: 8-289
Cow position: chr13:24162870-24163151 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-292
Cow position: chr13:24162539-24162818 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 150

Conread position: 23-280
Cow position: chr13:22125495-22125752 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 163
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 252, 240

Conread position: 23-280
Cow position: chr13:24163221-24163478 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 252, 240

Conread position: 35-250
Cow position: chr13:39930806-39931021 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 148, 144

Conread position: 35-281
Cow position: chr13:22124919-22125165 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 161, 166

Conread position: 35-281
Cow position: chr13:24162645-24162891 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 35-292
Cow position: chr13:22124835-22125092 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 128

Conread position: 1-253
Cow position: chr14:3080719-3080467 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 230, 236

Conread position: 1-280
Cow position: chr14:3061698-3061419 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 184, 192

Conread position: 1-289
Cow position: chr14:3080635-3080347 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 98

Conread position: 2-253
Cow position: chr14:3079962-3079711 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 93, 97

Conread position: 2-280
Cow position: chr14:25895410-25895688 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 104

Conread position: 2-289
Cow position: chr14:680771-681058 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-298
Cow position: chr14:3080130-3079834 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-289
Cow position: chr14:447550-447836 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-253
Cow position: chr14:25895328-25895577 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 98

Conread position: 4-278
Cow position: chr14:434024-434298 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-289
Cow position: chr14:680437-680722 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 4-290
Cow position: chr14:447635-447921 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 180
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 100

Conread position: 4-298
Cow position: chr14:433856-434150 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-250
Cow position: chr14:680355-680599 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-280
Cow position: chr14:3061021-3060747 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 177, 173

Conread position: 6-290
Cow position: chr14:3127890-3127604 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 274, 0

Conread position: 7-208
Cow position: chr14:3079873-3079672 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-278
Cow position: chr14:433775-434046 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 27

Conread position: 7-280
Cow position: chr14:447974-448247 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 66

Conread position: 7-281
Cow position: chr14:3080545-3080271 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 7-281
Cow position: chr14:3156115-3156389 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr14:434111-434393 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr14:663438-663156 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 74, 66

Conread position: 7-289
Cow position: chr14:680692-680974 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr14:3061440-3061158 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 95

Conread position: 7-289
Cow position: chr14:3156199-3156481 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 73

Conread position: 7-295
Cow position: chr14:663354-663066 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 66

Conread position: 9-289
Cow position: chr14:3080206-3079927 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 11-308
Cow position: chr14:3127549-3127252 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-249
Cow position: chr14:3127968-3127731 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 12-253
Cow position: chr14:25895672-25895913 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 57

Conread position: 12-280
Cow position: chr14:447727-447995 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 90

Conread position: 12-289
Cow position: chr14:3080456-3080179 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 251, 256

Conread position: 12-289
Cow position: chr14:3128136-3127859 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 96, 91

Conread position: 13-254
Cow position: chr14:3061098-3060857 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 14-289
Cow position: chr14:3060929-3060654 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 14-289
Cow position: chr14:3061265-3060990 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 59

Conread position: 19-250
Cow position: chr14:25895595-25895826 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 165, 172

Conread position: 20-289
Cow position: chr14:3080280-3080011 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 22-250
Cow position: chr14:25895934-25896162 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-252
Cow position: chr14:3061341-3061111 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 51

Conread position: 22-254
Cow position: chr14:25895514-25895746 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 42, 47

Conread position: 22-263
Cow position: chr14:25895094-25895335 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-289
Cow position: chr14:25895850-25896117 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 246, 251

Conread position: 22-298
Cow position: chr14:3156046-3156322 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 77

Conread position: 23-207
Cow position: chr14:3156299-3156483 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 23-218
Cow position: chr14:3155642-3155837 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 162, 169

Conread position: 23-250
Cow position: chr14:3128041-3127814 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 146, 153

Conread position: 23-250
Cow position: chr14:25895263-25895490 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 23-257
Cow position: chr14:25895767-25896001 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 76

Conread position: 23-268
Cow position: chr14:25895179-25895424 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 72

Conread position: 23-280
Cow position: chr14:433959-434216 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 50

Conread position: 23-289
Cow position: chr14:680624-680890 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr14:3061172-3060906 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 208, 214

Conread position: 34-250
Cow position: chr14:25895022-25895238 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr14:3061496-3061242 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 64

Conread position: 35-289
Cow position: chr14:3061580-3061326 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 241, 234

Conread position: 35-289
Cow position: chr14:3080013-3079759 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr14:3127609-3127355 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr14:3127777-3127523 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr14:3155570-3155824 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 45

Conread position: 35-290
Cow position: chr14:3127693-3127438 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 41-289
Cow position: chr14:3061742-3061494 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 42-288
Cow position: chr14:3080762-3080516 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 108

Conread position: 44-289
Cow position: chr14:447927-448172 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 49-289
Cow position: chr14:447512-447752 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 51

Conread position: 66-289
Cow position: chr14:3080822-3080599 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-289
Cow position: chr15:48468837-48469109 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 177
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 59

Conread position: 20-194
Cow position: chr15:19138842-19138668 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 79

Conread position: 35-253
Cow position: chr15:19138911-19138693 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 35-256
Cow position: chr15:19139162-19138942 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 9

Conread position: 2-209
Cow position: chr17:45350786-45350577 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 99

Conread position: 2-298
Cow position: chr17:41440827-41440531 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-280
Cow position: chr17:44467653-44467930 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 86, 96

Conread position: 3-283
Cow position: chr17:44467989-44468269 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 228, 234

Conread position: 3-298
Cow position: chr17:44467821-44468116 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-218
Cow position: chr17:41440405-41440191 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-289
Cow position: chr17:44468076-44468359 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 224, 232

Conread position: 7-280
Cow position: chr17:41440654-41440381 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-280
Cow position: chr17:41440738-41440465 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 21

Conread position: 7-280
Cow position: chr17:41441074-41440801 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 88, 98

Conread position: 7-298
Cow position: chr17:44467909-44468200 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 7-311
Cow position: chr17:41440990-41440685 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 124

Conread position: 7-321
Cow position: chr17:41440906-41440591 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 53, 37

Conread position: 9-289
Cow position: chr17:44467743-44468023 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-298
Cow position: chr17:44467494-44467780 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr17:41440470-41440204 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr17:44467589-44467855 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 78

Conread position: 23-321
Cow position: chr17:44467421-44467720 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 252, 246

Conread position: 34-298
Cow position: chr17:41440543-41440279 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 44-268
Cow position: chr17:44467357-44467582 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 16, 49

Conread position: 47-289
Cow position: chr17:41441118-41440876 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 58

Conread position: 1-256
Cow position: chr18:54668651-54668396 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 27

Conread position: 1-280
Cow position: chr18:55497494-55497215 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-205
Cow position: chr18:56391857-56391654 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-256
Cow position: chr18:53610338-53610084 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-257
Cow position: chr18:56316598-56316853 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-289
Cow position: chr18:53610170-53609883 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 71

Conread position: 2-289
Cow position: chr18:56316346-56316633 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-207
Cow position: chr18:55497240-55497036 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-250
Cow position: chr18:56128504-56128750 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-281
Cow position: chr18:49032915-49032638 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 163, 158

Conread position: 4-289
Cow position: chr18:56316432-56316717 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-289
Cow position: chr18:56329300-56329015 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 96

Conread position: 5-195
Cow position: chr18:44817873-44818063 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 178, 174

Conread position: 5-250
Cow position: chr18:55497658-55497413 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 191, 196

Conread position: 7-250
Cow position: chr18:56329129-56328886 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 7-281
Cow position: chr18:52012309-52012035 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr18:49032744-49032462 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr18:52012057-52011775 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-250
Cow position: chr18:22843979-22843737 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-289
Cow position: chr18:22844063-22843782 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 91

Conread position: 9-304
Cow position: chr18:55497318-55497023 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 18

Conread position: 11-289
Cow position: chr18:53610413-53610135 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-206
Cow position: chr18:56391040-56390846 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-250
Cow position: chr18:53635653-53635415 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-280
Cow position: chr18:56128680-56128948 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 172
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 61

Conread position: 12-280
Cow position: chr18:56391376-56391108 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 218, 225

Conread position: 12-280
Cow position: chr18:56391931-56391663 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 61

Conread position: 12-321
Cow position: chr18:54668808-54668498 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 22

Conread position: 13-257
Cow position: chr18:49033074-49032830 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 14-281
Cow position: chr18:56329626-56329359 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-289
Cow position: chr18:56329962-56329687 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 14-298
Cow position: chr18:56391458-56391174 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 169, 162

Conread position: 14-298
Cow position: chr18:56391542-56391258 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 253, 249

Conread position: 20-278
Cow position: chr18:56330040-56329782 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 21-249
Cow position: chr18:53635560-53635332 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 6

Conread position: 21-289
Cow position: chr18:49032562-49032294 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 167
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-250
Cow position: chr18:42724523-42724295 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 22-277
Cow position: chr18:55497389-55497134 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 77

Conread position: 22-277
Cow position: chr18:55497557-55497302 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 63, 67

Conread position: 22-278
Cow position: chr18:56391198-56390942 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 245, 235

Conread position: 22-281
Cow position: chr18:49032981-49032722 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-301
Cow position: chr18:54668714-54668435 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 180
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 51

Conread position: 23-193
Cow position: chr18:22844303-22844133 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 76

Conread position: 23-211
Cow position: chr18:54664068-54664255 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 16

Conread position: 23-250
Cow position: chr18:51400514-51400741 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 128

Conread position: 23-250
Cow position: chr18:56128859-56129086 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 81

Conread position: 23-280
Cow position: chr18:49033148-49032891 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 23-280
Cow position: chr18:49033316-49033059 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 23-281
Cow position: chr18:52012125-52011867 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 23-288
Cow position: chr18:53635306-53635041 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 81

Conread position: 23-289
Cow position: chr18:42724186-42723920 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr18:42724270-42724004 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr18:47846451-47846185 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr18:50281824-50282090 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr18:56267394-56267128 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 208, 214

Conread position: 23-289
Cow position: chr18:56316703-56316969 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr18:56329197-56328931 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 57

Conread position: 23-289
Cow position: chr18:56329449-56329183 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 37

Conread position: 23-289
Cow position: chr18:56329785-56329519 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr18:56391113-56390847 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 160, 156

Conread position: 23-298
Cow position: chr18:56329869-56329594 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 75

Conread position: 23-311
Cow position: chr18:56391281-56390992 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 0

Conread position: 34-253
Cow position: chr18:42724595-42724376 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 26

Conread position: 35-281
Cow position: chr18:56267466-56267220 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 35-281
Cow position: chr18:56316547-56316793 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:49032380-49032126 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:49033220-49032966 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:52012197-52011943 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:53635714-53635460 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:56128451-56128705 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:56329353-56329099 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr18:56329521-56329267 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 35-298
Cow position: chr18:49032632-49032369 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 37-321
Cow position: chr18:54669677-54669390 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 263, 0

Conread position: 39-277
Cow position: chr18:22844371-22844133 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 39-289
Cow position: chr18:22843603-22843353 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 213, 224

Conread position: 41-303
Cow position: chr18:54687742-54688004 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 58

Conread position: 42-251
Cow position: chr18:22843516-22843307 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 50-278
Cow position: chr18:56391590-56391362 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 42

Conread position: 55-289
Cow position: chr18:56391972-56391738 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 156, 164

Conread position: 65-289
Cow position: chr18:55497682-55497458 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 118, 114

Conread position: 11-289
Cow position: chr19:23649524-23649802 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 88

Conread position: 33-257
Cow position: chr19:23649462-23649686 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 66

Conread position: 35-289
Cow position: chr19:23649884-23650138 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 45

Conread position: 2-298
Cow position: chr21:12608551-12608255 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 182
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-298
Cow position: chr21:12658875-12659171 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 105, 101

Conread position: 2-298
Cow position: chr21:12659463-12659759 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 105

Conread position: 4-253
Cow position: chr21:12659297-12659546 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-280
Cow position: chr21:12608717-12608441 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 95

Conread position: 7-250
Cow position: chr21:12608294-12608051 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 7-254
Cow position: chr21:12659636-12659883 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 7-257
Cow position: chr21:12659720-12659970 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr21:12608462-12608180 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 88, 101

Conread position: 7-289
Cow position: chr21:12659384-12659666 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 230, 224

Conread position: 7-292
Cow position: chr21:12608378-12608093 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 179
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 100

Conread position: 12-250
Cow position: chr21:12608793-12608555 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-298
Cow position: chr21:12659053-12659339 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 96

Conread position: 13-205
Cow position: chr21:12659810-12660002 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-253
Cow position: chr21:12659567-12659798 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 23-278
Cow position: chr21:12659232-12659487 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 23-289
Cow position: chr21:12659148-12659414 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 34-256
Cow position: chr21:12658991-12659213 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 35-252
Cow position: chr21:12608602-12608385 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 40-253
Cow position: chr21:12658829-12659042 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 59

Conread position: 3-205
Cow position: chr22:12418647-12418445 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-281
Cow position: chr22:12418810-12418537 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-223
Cow position: chr25:24398697-24398475 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 9

Conread position: 1-277
Cow position: chr25:33530102-33530378 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 94, 98

Conread position: 1-278
Cow position: chr25:3636521-3636244 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 72

Conread position: 2-166
Cow position: chr25:25653154-25653318 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-208
Cow position: chr25:3676202-3676408 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 2-250
Cow position: chr25:3664057-3664305 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-253
Cow position: chr25:33506790-33507041 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 2-253
Cow position: chr25:34763204-34763455 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-278
Cow position: chr25:33530271-33530547 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 97

Conread position: 2-280
Cow position: chr25:3664225-3664503 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-298
Cow position: chr25:24385374-24385078 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 9

Conread position: 2-299
Cow position: chr25:25652566-25652863 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 261

Conread position: 4-231
Cow position: chr25:36844576-36844349 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-250
Cow position: chr25:25652820-25653066 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 11, 7

Conread position: 4-253
Cow position: chr25:33529226-33529475 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 192, 197

Conread position: 4-268
Cow position: chr25:25652988-25653252 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-318
Cow position: chr25:33530525-33530839 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 69

Conread position: 5-194
Cow position: chr25:34473885-34474074 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-320
Cow position: chr25:24385287-24384971 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 42

Conread position: 6-250
Cow position: chr25:3663977-3664221 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 93

Conread position: 6-268
Cow position: chr25:3664145-3664407 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-323
Cow position: chr25:33506878-33507193 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 264

Conread position: 7-206
Cow position: chr25:24398607-24398408 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 7-249
Cow position: chr25:3676039-3676281 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 7-280
Cow position: chr25:3636431-3636158 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 92

Conread position: 7-280
Cow position: chr25:25652319-25652592 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr25:3676123-3676405 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 263, 268

Conread position: 7-289
Cow position: chr25:25652403-25652685 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr25:33157342-33157060 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-289
Cow position: chr25:33529145-33529427 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 88, 92

Conread position: 7-311
Cow position: chr25:24385201-24384896 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 81, 77

Conread position: 7-329
Cow position: chr25:3664314-3664635 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 287, 0

Conread position: 8-289
Cow position: chr25:33530193-33530474 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 91

Conread position: 8-321
Cow position: chr25:4657417-4657103 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 95

Conread position: 9-278
Cow position: chr25:33530362-33530631 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 243, 247

Conread position: 9-289
Cow position: chr25:36844655-36844375 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 172
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-194
Cow position: chr25:34733875-34733691 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-299
Cow position: chr25:34473809-34474095 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 11-250
Cow position: chr25:326548-326787 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 96, 91

Conread position: 11-280
Cow position: chr25:4657331-4657061 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 260

Conread position: 11-289
Cow position: chr25:34473726-34474001 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 75, 88

Conread position: 12-194
Cow position: chr25:23267200-23267017 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 12-254
Cow position: chr25:25652660-25652903 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 171, 167

Conread position: 12-278
Cow position: chr25:34473643-34473906 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 87

Conread position: 12-280
Cow position: chr25:25652492-25652760 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 13-221
Cow position: chr25:4657244-4657036 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 87

Conread position: 13-268
Cow position: chr25:24385027-24384772 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-249
Cow position: chr25:33529068-33529303 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 81, 85

Conread position: 14-256
Cow position: chr25:24384942-24384699 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 59

Conread position: 14-278
Cow position: chr25:25652914-25653178 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-289
Cow position: chr25:22235969-22236242 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 250, 7

Conread position: 16-289
Cow position: chr25:3637034-3636761 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 199, 211

Conread position: 20-206
Cow position: chr25:34763555-34763741 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-240
Cow position: chr25:33157160-33156941 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 164, 171

Conread position: 21-277
Cow position: chr25:33530039-33530294 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 235, 23

Conread position: 22-250
Cow position: chr25:25653090-25653318 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 77

Conread position: 22-276
Cow position: chr25:3636248-3635994 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 22-278
Cow position: chr25:3636332-3636076 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 22-281
Cow position: chr25:33298625-33298884 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-289
Cow position: chr25:33157243-33156976 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 23-210
Cow position: chr25:427392-427579 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 23-248
Cow position: chr25:22941230-22941005 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 23-250
Cow position: chr25:33127949-33128176 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 144, 138

Conread position: 23-276
Cow position: chr25:24385101-24384848 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 50

Conread position: 23-280
Cow position: chr25:23267272-23267015 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 128, 56

Conread position: 23-280
Cow position: chr25:25652755-25653012 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 160, 156

Conread position: 23-280
Cow position: chr25:33530460-33530717 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 229, 233

Conread position: 23-289
Cow position: chr25:34732545-34732279 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 76

Conread position: 23-289
Cow position: chr25:34733946-34733680 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 66, 76

Conread position: 23-290
Cow position: chr25:427308-427575 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 62

Conread position: 35-281
Cow position: chr25:326488-326734 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 25

Conread position: 35-281
Cow position: chr25:22235904-22236150 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 73

Conread position: 35-281
Cow position: chr25:33127793-33128039 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 35-281
Cow position: chr25:34763153-34763399 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 39-280
Cow position: chr25:3663926-3664167 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 56, 60

Conread position: 39-280
Cow position: chr25:3675987-3676228 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 43-280
Cow position: chr25:25652187-25652424 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 58-321
Cow position: chr25:33506762-33507026 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 242, 0

Conread position: 67-278
Cow position: chr25:33529037-33529248 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 68-289
Cow position: chr25:34733985-34733764 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 93-298
Cow position: chr25:3675957-3676162 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 123-298
Cow position: chr25:3663926-3664101 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-206
Cow position: chr28:34696379-34696578 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 95

Conread position: 7-281
Cow position: chr28:34696127-34696401 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 98

Conread position: 7-281
Cow position: chr28:34696211-34696485 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 95

Conread position: 12-289
Cow position: chr28:33210364-33210642 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 197, 0

Conread position: 32-250
Cow position: chr28:34696068-34696286 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 70

Conread position: 35-289
Cow position: chr28:34696323-34696577 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 67

Conread position: 59-281
Cow position: chr28:33210329-33210549 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 1-289
Cow position: chr3:20194763-20195051 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 236

Conread position: 1-528
Cow position: chr3:20195015-20195562 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 304

Conread position: 2-241
Cow position: chr3:20194488-20194728 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 85, 97

Conread position: 4-267
Cow position: chr3:20194934-20195197 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 95

Conread position: 7-280
Cow position: chr3:20194853-20195126 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 92

Conread position: 12-298
Cow position: chr3:20194582-20194892 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 249

Conread position: 34-267
Cow position: chr3:20194436-20194669 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 49-268
Cow position: chr3:20194727-20194946 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 43

Conread position: 118-298
Cow position: chr3:20194436-20194616 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 156, 151

Conread position: 1-166
Cow position: chr4:65261343-65261178 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 98

Conread position: 2-211
Cow position: chr4:65494641-65494432 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 97

Conread position: 2-311
Cow position: chr4:65494809-65494499 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 178

Conread position: 3-258
Cow position: chr4:65261425-65261170 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 103

Conread position: 9-280
Cow position: chr4:65703534-65703263 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 90

Conread position: 9-289
Cow position: chr4:65261587-65261307 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 64

Conread position: 9-289
Cow position: chr4:65703450-65703170 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 98

Conread position: 9-301
Cow position: chr4:65121666-65121958 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 90

Conread position: 10-289
Cow position: chr4:65350347-65350623 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 266, 136

Conread position: 10-289
Cow position: chr4:65702828-65702549 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 186, 191

Conread position: 11-268
Cow position: chr4:65121752-65122009 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-206
Cow position: chr4:65121192-65121386 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-280
Cow position: chr4:65702742-65702474 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 87

Conread position: 12-289
Cow position: chr4:65121837-65122114 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 196, 210

Conread position: 13-278
Cow position: chr4:65494888-65494617 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 92

Conread position: 13-311
Cow position: chr4:65261499-65261200 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 278, 282

Conread position: 14-277
Cow position: chr4:65350516-65350779 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 92

Conread position: 14-280
Cow position: chr4:65146474-65146740 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 41, 46

Conread position: 20-258
Cow position: chr4:65494707-65494469 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 79

Conread position: 20-311
Cow position: chr4:65494965-65494667 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 112, 258

Conread position: 23-289
Cow position: chr4:65350108-65350374 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 253, 246

Conread position: 23-311
Cow position: chr4:65703604-65703315 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 37, 26

Conread position: 33-220
Cow position: chr4:65546363-65546173 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 176, 0

Conread position: 41-283
Cow position: chr4:65146417-65146659 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 155, 162

Conread position: 44-278
Cow position: chr4:65703667-65703433 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 47-280
Cow position: chr4:65495022-65494783 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 168, 0

Conread position: 50-296
Cow position: chr4:65121146-65121392 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 57

Conread position: 51-253
Cow position: chr4:65157938-65158140 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-289
Cow position: chr6:49428607-49428893 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 98

Conread position: 7-289
Cow position: chr6:49428275-49428557 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 88, 100

Conread position: 7-289
Cow position: chr6:49428359-49428641 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 108, 96

Conread position: 7-289
Cow position: chr6:49429031-49429313 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 101

Conread position: 7-289
Cow position: chr6:49429115-49429397 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 99

Conread position: 8-298
Cow position: chr6:49428528-49428818 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 99

Conread position: 12-298
Cow position: chr6:49428700-49428986 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 85

Conread position: 19-281
Cow position: chr6:49428791-49429053 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 88

Conread position: 20-267
Cow position: chr6:49428960-49429207 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 22-268
Cow position: chr6:49429298-49429540 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 85

Conread position: 22-281
Cow position: chr6:49428878-49429137 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 77

Conread position: 26-253
Cow position: chr6:49428461-49428689 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 5, 70

Conread position: 30-268
Cow position: chr6:49428214-49428452 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 35-289
Cow position: chr6:49429227-49429481 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 72

Conread position: 2-278
Cow position: chr7:12293306-12293582 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 181, 177

Conread position: 7-278
Cow position: chr7:12293563-12293834 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-298
Cow position: chr7:28846722-28847013 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 72, 66

Conread position: 7-301
Cow position: chr7:12293647-12293941 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 265, 256

Conread position: 7-304
Cow position: chr7:12293731-12294027 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 279, 271

Conread position: 7-325
Cow position: chr7:28846806-28847124 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 205
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 214, 221

Conread position: 14-250
Cow position: chr7:12293402-12293638 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-277
Cow position: chr7:28846561-28846824 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-280
Cow position: chr7:12293486-12293752 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 49-250
Cow position: chr7:12293269-12293470 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 31

Conread position: 67-240
Cow position: chr7:28846446-28846619 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 116, 109

Conread position: 1-289
Cow position: chrX:13826655-13826367 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 10

Conread position: 2-280
Cow position: chrX:13826906-13826628 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 86

Conread position: 3-257
Cow position: chrX:13826485-13826231 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-253
Cow position: chrX:14181259-14181013 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-229
Cow position: chrX:13826727-13826511 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 13-252
Cow position: chrX:14181337-14181098 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 20-320
Cow position: chrX:14181414-14181113 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 271, 0

Conread position: 23-289
Cow position: chrX:13826549-13826283 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 57