Cow genome map
| Conread name: | Ss1.1-rfcc10b_j12.5 |
| Conread position: | 1-193 |
| Cow position: | chr1:42756984-42757178 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 297-451 |
| Cow position: | chr1:42757858-42758012 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 453-596 |
| Cow position: | chr1:42758949-42759092 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 137 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 242-333 |
| Cow position: | chr10:56979618-56979709 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 330-669 |
| Cow position: | chr10:56980623-56980960 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 128 |
| Conread position: | 241-672 |
| Cow position: | chr13:43930941-43931373 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 393 |
| Conread position: | 245-364 |
| Cow position: | chr13:58386645-58386528 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 464-580 |
| Cow position: | chr13:12492108-12492224 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 487-672 |
| Cow position: | chr13:58385729-58385543 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 235-568 |
| Cow position: | chr16:56452939-56453270 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 241-642 |
| Cow position: | chr16:34181020-34181428 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 387-618 |
| Cow position: | chr16:23182178-23181964 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 222, 56 |
| Conread position: | 552-670 |
| Cow position: | chr16:56453599-56453723 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 241-669 |
| Cow position: | chr17:12757061-12756640 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 219-469 |
| Cow position: | chr18:29427107-29426856 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 246-653 |
| Cow position: | chr19:37846533-37846941 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 302 |
| Conread position: | 245-645 |
| Cow position: | chr2:3162386-3162790 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 241-510 |
| Cow position: | chr20:34137859-34138127 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 508-645 |
| Cow position: | chr20:34138443-34138580 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 241-641 |
| Cow position: | chr25:4914335-4913934 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 213 |
| Conread position: | 249-586 |
| Cow position: | chr28:16911237-16910897 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 25 |
| Conread position: | 241-670 |
| Cow position: | chr3:68091008-68091419 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 241-672 |
| Cow position: | chr9:49617615-49618047 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 393 |
| Conread position: | 243-498 |
| Cow position: | chr9:49542038-49541786 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 44 |
| Conread position: | 480-593 |
| Cow position: | chr9:49541750-49541642 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 240-386 |
| Cow position: | chrX:22014155-22014304 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 243-551 |
| Cow position: | chrX:28917462-28917765 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 371-604 |
| Cow position: | chrX:22014318-22014549 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |