Cow genome map
| Conread name: | Ss1.1-rgul0106_o21.5.5 |
| Conread position: | 71-174 |
| Cow position: | chr1:62179962-62180064 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 140-288 |
| Cow position: | chr1:62180195-62180343 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-536 |
| Cow position: | chr1:62181592-62181852 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-545 |
| Cow position: | chr10:30452569-30452080 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 483, 0 |
| Conread position: | 106-303 |
| Cow position: | chr11:41518783-41518585 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 122-408 |
| Cow position: | chr12:47863939-47863650 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 123-326 |
| Cow position: | chr14:42734379-42734582 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-432 |
| Cow position: | chr16:34955416-34955571 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 81, 10 |
| Conread position: | 48-313 |
| Cow position: | chr18:36349545-36349280 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 104-345 |
| Cow position: | chr18:28248856-28249100 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 129 |
| Conread position: | 305-410 |
| Cow position: | chr18:36349009-36348904 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 406-558 |
| Cow position: | chr18:36348734-36348583 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 53-554 |
| Cow position: | chr19:8337004-8337525 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 506 |
| Conread position: | 104-432 |
| Cow position: | chr19:13019638-13019958 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 71-409 |
| Cow position: | chr2:74140302-74139967 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 157, 19 |
| Conread position: | 48-606 |
| Cow position: | chr21:36879043-36879604 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 493 |
| Conread position: | 631-780 |
| Cow position: | chr21:36880072-36880215 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 105-432 |
| Cow position: | chr25:17721689-17721377 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 140 |
| Conread position: | 50-555 |
| Cow position: | chr3:27551224-27551727 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 94 |
| Conread position: | 49-536 |
| Cow position: | chr5:25450740-25450252 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 90-356 |
| Cow position: | chr6:25139888-25139620 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 127, 222 |
| Conread position: | 48-540 |
| Cow position: | chr8:33090450-33090925 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 137-394 |
| Cow position: | chr9:21822078-21821829 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 44, 0 |