Cow genome map
| Conread name: | Ss1.1-rhlv26b_j2.5 |
| Conread position: | 285-530 |
| Cow position: | chr1:2000086-1999841 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 295-560 |
| Cow position: | chr1:1999656-1999393 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 246-530 |
| Cow position: | chr14:433777-434057 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 300-530 |
| Cow position: | chr14:3080241-3080011 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 309-547 |
| Cow position: | chr14:680501-680739 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 346-536 |
| Cow position: | chr14:3127875-3127684 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 348-530 |
| Cow position: | chr14:680708-680890 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 1-912 |
| Cow position: | chr18:44944076-44945002 (view UCSC Genome Browser custom track) |
| Alignm length: | 927 |
| Alignm identity: | 810 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 127-559 |
| Cow position: | chr18:56391665-56391240 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 208-535 |
| Cow position: | chr18:56391247-56390926 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 231-529 |
| Cow position: | chr18:44817778-44818072 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 280-514 |
| Cow position: | chr18:55497542-55497303 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 299-559 |
| Cow position: | chr18:56391330-56391072 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 295-530 |
| Cow position: | chr21:12659431-12659666 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 296-530 |
| Cow position: | chr21:12659096-12659330 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 300-530 |
| Cow position: | chr21:12658932-12659162 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 309-530 |
| Cow position: | chr21:12659193-12659414 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 309-536 |
| Cow position: | chr21:12659613-12659840 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 344-524 |
| Cow position: | chr21:12608702-12608522 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 172, 163 |
| Conread position: | 45-530 |
| Cow position: | chr25:25652716-25653189 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 209-537 |
| Cow position: | chr25:25652706-25653027 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 210-524 |
| Cow position: | chr25:4657450-4657142 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 210-530 |
| Cow position: | chr25:25652371-25652685 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 187, 64 |
| Conread position: | 245-530 |
| Cow position: | chr25:33506712-33506993 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 285-508 |
| Cow position: | chr25:25653028-25653251 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 285-530 |
| Cow position: | chr25:25652272-25652517 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 285-551 |
| Cow position: | chr25:33506832-33507098 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 139 |
| Conread position: | 309-530 |
| Cow position: | chr25:4657441-4657220 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 309-535 |
| Cow position: | chr25:25652632-25652858 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 99 |
| Conread position: | 309-536 |
| Cow position: | chr25:3664375-3664603 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 262-537 |
| Cow position: | chr3:20194420-20194699 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 280-533 |
| Cow position: | chr3:20195051-20195306 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 285-508 |
| Cow position: | chr3:20194974-20195197 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 207-530 |
| Cow position: | chr4:65261624-65261307 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 120, 64 |
| Conread position: | 207-544 |
| Cow position: | chr4:65703487-65703155 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 278-558 |
| Cow position: | chr4:65703510-65703228 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 280-559 |
| Cow position: | chr4:65703592-65703311 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 309-557 |
| Cow position: | chr4:65350486-65350734 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 210-562 |
| Cow position: | chr6:49428747-49429091 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 64 |
| Conread position: | 280-530 |
| Cow position: | chr6:49428389-49428641 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 309-530 |
| Cow position: | chr6:49428504-49428725 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 103 |
| Conread position: | 309-530 |
| Cow position: | chr6:49428672-49428893 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 110 |
| Conread position: | 210-530 |
| Cow position: | chr7:12293531-12293845 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 34 |