Cow genome map
| Conread name: | Ss1.1-rill304b_m4.5 |
| Conread position: | 1-112 |
| Cow position: | chr1:86280857-86280745 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 111-247 |
| Cow position: | chr1:76070282-76070146 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-247 |
| Cow position: | chr1:76073720-76073584 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-228 |
| Cow position: | chr1:86280722-86280607 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-247 |
| Cow position: | chr11:30131735-30131871 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-247 |
| Cow position: | chr11:45889398-45889535 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 111-263 |
| Cow position: | chr12:34474522-34474370 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-248 |
| Cow position: | chr13:56478850-56478618 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 111-246 |
| Cow position: | chr14:4539904-4540036 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-247 |
| Cow position: | chr15:34759276-34759014 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 114-252 |
| Cow position: | chr15:38519283-38519420 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1-127 |
| Cow position: | chr16:17748642-17748514 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 111-235 |
| Cow position: | chr16:17748509-17748385 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-240 |
| Cow position: | chr18:388449-388320 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-247 |
| Cow position: | chr18:8499415-8499279 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-245 |
| Cow position: | chr2:76047382-76047249 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 111-247 |
| Cow position: | chr2:82127581-82127713 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 111-252 |
| Cow position: | chr2:58544756-58544900 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 119-249 |
| Cow position: | chr2:76035013-76034880 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 119-251 |
| Cow position: | chr20:18834583-18834451 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-249 |
| Cow position: | chr22:4590801-4590663 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-247 |
| Cow position: | chr22:12526869-12526995 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-272 |
| Cow position: | chr23:467685-467938 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 243, 29 |
| Conread position: | 111-235 |
| Cow position: | chr23:26238322-26238446 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-247 |
| Cow position: | chr25:23496186-23496319 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 111-247 |
| Cow position: | chr26:27451640-27451775 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-309 |
| Cow position: | chr3:30379350-30379643 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 14 |
| Conread position: | 119-252 |
| Cow position: | chr3:73193384-73193251 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 88, 122 |
| Conread position: | 560-658 |
| Cow position: | chr3:30379632-30379730 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 708-1011 |
| Cow position: | chr3:30379828-30380116 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 119-251 |
| Cow position: | chr4:2122891-2122756 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 111-247 |
| Cow position: | chr5:21459193-21459057 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-242 |
| Cow position: | chr5:19877443-19877314 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-247 |
| Cow position: | chr5:21461024-21460891 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-250 |
| Cow position: | chr5:35079344-35079475 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-247 |
| Cow position: | chr6:21645531-21645301 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 167 |
| Conread position: | 111-248 |
| Cow position: | chr6:60109684-60109815 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 113-248 |
| Cow position: | chr6:36543965-36544101 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 120-247 |
| Cow position: | chr6:6759445-6759570 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 18-254 |
| Cow position: | chr8:44089732-44089981 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 119-256 |
| Cow position: | chr8:52978811-52978677 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 111-247 |
| Cow position: | chr9:17587016-17586880 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-248 |
| Cow position: | chrX:28857085-28856957 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 0 |