Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-risp16_f4.5
        

               Conread position:
               411-576
               

               Cow position:
               chr10:21341001-21341173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               412-576
               

               Cow position:
               chr10:53822522-53822361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr10:69632923-69632766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               415-781
               

               Cow position:
               chr10:21010918-21010535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 35
               

               Conread position:
               422-581
               

               Cow position:
               chr10:14606503-14606348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               602-781
               

               Cow position:
               chr10:21341238-21341416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               602-781
               

               Cow position:
               chr10:50565660-50565838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               73, 43
               

               Conread position:
               605-771
               

               Cow position:
               chr10:60963279-60963113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               605-777
               

               Cow position:
               chr10:50564494-50564662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr10:9108969-9109140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               605-781
               

               Cow position:
               chr10:16899952-16900124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 114
               

               Conread position:
               605-781
               

               Cow position:
               chr10:41118429-41118602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               140, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr10:53822076-53821904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               605-781
               

               Cow position:
               chr10:67156608-67156436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-804
               

               Cow position:
               chr10:45267535-45267329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               606-781
               

               Cow position:
               chr10:9372523-9372697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               606-804
               

               Cow position:
               chr10:55143169-55143370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               614-781
               

               Cow position:
               chr10:69632693-69632531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               616-772
               

               Cow position:
               chr10:14894464-14894617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               643-781
               

               Cow position:
               chr10:48450504-48450372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               402-573
               

               Cow position:
               chr11:48073979-48074148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               416-575
               

               Cow position:
               chr11:31348876-31349037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               422-751
               

               Cow position:
               chr11:31815254-31815597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               577-781
               

               Cow position:
               chr11:58354865-58355069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               586-781
               

               Cow position:
               chr11:19228318-19228514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               604-760
               

               Cow position:
               chr11:50040652-50040808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               605-781
               

               Cow position:
               chr11:12320649-12320472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 152
               

               Conread position:
               605-781
               

               Cow position:
               chr11:14191407-14191235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr11:52785754-52785585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-784
               

               Cow position:
               chr11:2891885-2891710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               142, 40
               

               Conread position:
               606-780
               

               Cow position:
               chr11:85701822-85702000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               610-781
               

               Cow position:
               chr11:35745733-35745902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               610-781
               

               Cow position:
               chr11:39867565-39867744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 153
               

               Conread position:
               610-781
               

               Cow position:
               chr11:63667163-63667331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               610-782
               

               Cow position:
               chr11:40582385-40582213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               618-780
               

               Cow position:
               chr11:65753036-65752875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               648-781
               

               Cow position:
               chr11:70695024-70695155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               604-781
               

               Cow position:
               chr12:37481909-37481731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               605-752
               

               Cow position:
               chr12:2005873-2005726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               605-757
               

               Cow position:
               chr12:37465761-37465611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               605-777
               

               Cow position:
               chr12:30979349-30979523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               605-781
               

               Cow position:
               chr12:24334166-24334338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               634-781
               

               Cow position:
               chr12:26550111-26550254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               653-781
               

               Cow position:
               chr12:38589403-38589530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               659-779
               

               Cow position:
               chr12:26616564-26616682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr13:52852368-52852201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               415-576
               

               Cow position:
               chr13:15347814-15347975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 61
               

               Conread position:
               577-781
               

               Cow position:
               chr13:27505633-27505424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               595-781
               

               Cow position:
               chr13:42101738-42101554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               602-781
               

               Cow position:
               chr13:33006538-33006714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               603-780
               

               Cow position:
               chr13:43784123-43784298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               604-781
               

               Cow position:
               chr13:26005246-26005421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               125, 46
               

               Conread position:
               605-743
               

               Cow position:
               chr13:5610567-5610704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr13:14024917-14025089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr13:54409334-54409513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               605-783
               

               Cow position:
               chr13:52852132-52851957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-794
               

               Cow position:
               chr13:52184234-52184427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 174
               

               Conread position:
               610-781
               

               Cow position:
               chr13:6063371-6063531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               622-780
               

               Cow position:
               chr13:6492881-6493036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr14:1858359-1858195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr14:25504990-25504831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               600-781
               

               Cow position:
               chr14:47013651-47013471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               602-784
               

               Cow position:
               chr14:25935409-25935235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               604-726
               

               Cow position:
               chr14:23755069-23754949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               604-779
               

               Cow position:
               chr14:46392488-46392661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               84, 41
               

               Conread position:
               605-781
               

               Cow position:
               chr14:5570004-5570177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr14:7115918-7116106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               40, 163
               

               Conread position:
               605-781
               

               Cow position:
               chr14:18579266-18579440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr14:37249740-37249564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               161, 40
               

               Conread position:
               606-781
               

               Cow position:
               chr14:20887462-20887294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               606-781
               

               Cow position:
               chr14:23148851-23149021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr14:20690292-20690116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               41, 151
               

               Conread position:
               610-781
               

               Cow position:
               chr14:25504538-25504370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               617-781
               

               Cow position:
               chr14:18439548-18439705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               128, 29
               

               Conread position:
               617-781
               

               Cow position:
               chr14:33456642-33456480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               620-780
               

               Cow position:
               chr14:8456668-8456827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               648-781
               

               Cow position:
               chr14:34097403-34097535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               653-781
               

               Cow position:
               chr14:30647644-30647517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 89
               

               Conread position:
               422-575
               

               Cow position:
               chr15:30559636-30559796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 72
               

               Conread position:
               577-781
               

               Cow position:
               chr15:36382225-36382024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               605-743
               

               Cow position:
               chr15:42381911-42381775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-777
               

               Cow position:
               chr15:8284770-8284939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               605-779
               

               Cow position:
               chr15:9277624-9277453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr15:25076026-25076192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               605-781
               

               Cow position:
               chr15:30559865-30560035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr15:50104412-50104238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               606-781
               

               Cow position:
               chr15:5225178-5225350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               606-781
               

               Cow position:
               chr15:22336973-22337148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               113, 39
               

               Conread position:
               607-781
               

               Cow position:
               chr15:26624698-26624531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               608-784
               

               Cow position:
               chr15:52816610-52816444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr15:433218-433386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               130, 35
               

               Conread position:
               635-781
               

               Cow position:
               chr15:40490426-40490568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               407-576
               

               Cow position:
               chr16:56202529-56202699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 87
               

               Conread position:
               415-576
               

               Cow position:
               chr16:31133148-31133316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               415-576
               

               Cow position:
               chr16:54014624-54014793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               416-576
               

               Cow position:
               chr16:27275198-27275030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               598-781
               

               Cow position:
               chr16:31529219-31529403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 159
               

               Conread position:
               603-781
               

               Cow position:
               chr16:29626226-29626050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               116, 153
               

               Conread position:
               605-748
               

               Cow position:
               chr16:12114163-12114302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               605-779
               

               Cow position:
               chr16:21558232-21558408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr16:19491449-19491280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr16:27274967-27274796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr16:33439976-33440150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr16:40516462-40516295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               606-767
               

               Cow position:
               chr16:33644221-33644063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               609-782
               

               Cow position:
               chr16:11171931-11172101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               616-781
               

               Cow position:
               chr16:30655414-30655578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               132, 29
               

               Conread position:
               668-784
               

               Cow position:
               chr16:45601269-45601385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               580-781
               

               Cow position:
               chr17:1100292-1100092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               599-781
               

               Cow position:
               chr17:25545149-25545329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               602-717
               

               Cow position:
               chr17:22470161-22470050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               604-759
               

               Cow position:
               chr17:22835293-22835450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr17:27865435-27865610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               605-772
               

               Cow position:
               chr17:35265118-35264960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr17:23783724-23783548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr17:27593343-27593514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr17:35251429-35251250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 66
               

               Conread position:
               605-781
               

               Cow position:
               chr17:41715507-41715679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               605-785
               

               Cow position:
               chr17:4298-4118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 46
               

               Conread position:
               606-781
               

               Cow position:
               chr17:1101354-1101526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               606-782
               

               Cow position:
               chr17:42585636-42585811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               415-551
               

               Cow position:
               chr18:21618218-21618078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               415-732
               

               Cow position:
               chr18:25088739-25089061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 53
               

               Conread position:
               422-575
               

               Cow position:
               chr18:21737443-21737281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               478-781
               

               Cow position:
               chr18:11406350-11406659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               176, 18
               

               Conread position:
               605-772
               

               Cow position:
               chr18:21737212-21737044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               605-779
               

               Cow position:
               chr18:39097804-39097969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               114, 17
               

               Conread position:
               605-781
               

               Cow position:
               chr18:52249112-52249283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-784
               

               Cow position:
               chr18:2116973-2116797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               606-702
               

               Cow position:
               chr18:14140061-14140155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               606-781
               

               Cow position:
               chr18:4471920-4472097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               606-781
               

               Cow position:
               chr18:4494866-4494697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               606-781
               

               Cow position:
               chr18:16071821-16071995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               83, 39
               

               Conread position:
               606-781
               

               Cow position:
               chr18:27827852-27828025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               615-781
               

               Cow position:
               chr18:48005053-48005217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               663-781
               

               Cow position:
               chr18:21617691-21617576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr19:6541859-6542037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr19:21017115-21017292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               406-573
               

               Cow position:
               chr2:45113948-45113776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr2:19063380-19063546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 85
               

               Conread position:
               415-575
               

               Cow position:
               chr2:70279451-70279289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               415-576
               

               Cow position:
               chr2:64783516-64783684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               419-575
               

               Cow position:
               chr2:19150061-19150223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 84
               

               Conread position:
               423-575
               

               Cow position:
               chr2:59163617-59163773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               577-767
               

               Cow position:
               chr2:73168734-73168925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               587-729
               

               Cow position:
               chr2:74308128-74307982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               588-781
               

               Cow position:
               chr2:64784351-64784540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               602-777
               

               Cow position:
               chr2:60310835-60311009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               602-781
               

               Cow position:
               chr2:376862-377039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               604-781
               

               Cow position:
               chr2:45690218-45690049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               604-782
               

               Cow position:
               chr2:33219222-33219397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-752
               

               Cow position:
               chr2:70279220-70279076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               605-753
               

               Cow position:
               chr2:23646391-23646245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               140, 40
               

               Conread position:
               605-767
               

               Cow position:
               chr2:69924250-69924406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               605-772
               

               Cow position:
               chr2:5327797-5327633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 41
               

               Conread position:
               605-780
               

               Cow position:
               chr2:81129987-81129813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               605-781
               

               Cow position:
               chr2:19063612-19063782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr2:19150290-19150462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr2:40449547-40449721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               605-784
               

               Cow position:
               chr2:42264654-42264479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               606-777
               

               Cow position:
               chr2:65334559-65334391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               51, 40
               

               Conread position:
               606-782
               

               Cow position:
               chr2:45113705-45113532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 39
               

               Conread position:
               607-778
               

               Cow position:
               chr2:39548852-39549020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               610-779
               

               Cow position:
               chr2:21755229-21755063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               615-781
               

               Cow position:
               chr2:55407221-55407059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               623-775
               

               Cow position:
               chr2:76616916-76616768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               642-782
               

               Cow position:
               chr2:377819-377679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               644-781
               

               Cow position:
               chr2:46492453-46492318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               126, 15
               

               Conread position:
               648-780
               

               Cow position:
               chr2:66454623-66454491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               100, 94
               

               Conread position:
               412-576
               

               Cow position:
               chr20:20768909-20768751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               415-576
               

               Cow position:
               chr20:11065479-11065642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               422-652
               

               Cow position:
               chr20:36717415-36717645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 47
               

               Conread position:
               602-781
               

               Cow position:
               chr20:7776901-7777075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               604-743
               

               Cow position:
               chr20:39730600-39730738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr20:20768685-20768515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               605-768
               

               Cow position:
               chr20:12324579-12324419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               605-777
               

               Cow position:
               chr20:41446079-41446248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-780
               

               Cow position:
               chr20:24000455-24000630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr20:36046305-36046132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               606-777
               

               Cow position:
               chr20:23999156-23999322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               608-781
               

               Cow position:
               chr20:19121417-19121589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               610-781
               

               Cow position:
               chr20:18828764-18828933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr20:20071305-20071465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr20:35815584-35815413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               81, 34
               

               Conread position:
               577-781
               

               Cow position:
               chr21:35555645-35555852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               587-784
               

               Cow position:
               chr21:42596030-42596224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               602-781
               

               Cow position:
               chr21:41140053-41139879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 43
               

               Conread position:
               604-781
               

               Cow position:
               chr21:958470-958639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-780
               

               Cow position:
               chr21:47955524-47955700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 38
               

               Conread position:
               605-781
               

               Cow position:
               chr21:9876161-9876332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr21:32040341-32040166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr21:41561260-41561435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               129, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr21:42074718-42074545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr21:42375286-42375458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 38
               

               Conread position:
               606-781
               

               Cow position:
               chr21:30925963-30925791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               606-781
               

               Cow position:
               chr21:45926367-45926194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               623-780
               

               Cow position:
               chr21:8515788-8515941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               590-753
               

               Cow position:
               chr22:3467580-3467741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               598-772
               

               Cow position:
               chr22:13513262-13513091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               602-729
               

               Cow position:
               chr22:7211077-7210953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               604-723
               

               Cow position:
               chr22:20077963-20077848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               604-781
               

               Cow position:
               chr22:6238785-6238614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               605-780
               

               Cow position:
               chr22:29823060-29822885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr22:35460074-35459901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr22:894199-894031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               415-573
               

               Cow position:
               chr23:7523200-7523363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               415-781
               

               Cow position:
               chr23:13307343-13307731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               59, 86
               

               Conread position:
               419-575
               

               Cow position:
               chr23:28882202-28882357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               422-782
               

               Cow position:
               chr23:36440102-36439728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 242
               

               Conread position:
               480-776
               

               Cow position:
               chr23:31086094-31086403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 180
               

               Conread position:
               577-781
               

               Cow position:
               chr23:4882891-4882681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               604-781
               

               Cow position:
               chr23:3202232-3202408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr23:12972387-12972216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr23:5219921-5220093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr23:18243901-18244070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               605-799
               

               Cow position:
               chr23:595472-595662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               606-714
               

               Cow position:
               chr23:1280576-1280684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               606-781
               

               Cow position:
               chr23:28882426-28882594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               606-781
               

               Cow position:
               chr23:35164636-35164467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               407-555
               

               Cow position:
               chr24:27252704-27252851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               602-777
               

               Cow position:
               chr24:266062-265896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr24:263825-263649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               605-781
               

               Cow position:
               chr24:31376988-31377160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr24:38036945-38036773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-782
               

               Cow position:
               chr24:41205547-41205722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               606-781
               

               Cow position:
               chr24:26262325-26262498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               627-781
               

               Cow position:
               chr24:27253442-27253593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               402-726
               

               Cow position:
               chr25:18455830-18456152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               193, 9
               

               Conread position:
               415-575
               

               Cow position:
               chr25:23821045-23821199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               415-576
               

               Cow position:
               chr25:20193145-20193312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               420-780
               

               Cow position:
               chr25:39715831-39716181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               577-772
               

               Cow position:
               chr25:25687056-25687256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               605-703
               

               Cow position:
               chr25:21036675-21036579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-726
               

               Cow position:
               chr25:20193382-20193505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               605-781
               

               Cow position:
               chr25:6932686-6932514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr25:20645861-20646037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               606-781
               

               Cow position:
               chr25:21516576-21516754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 35
               

               Conread position:
               610-780
               

               Cow position:
               chr25:34420506-34420670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               610-781
               

               Cow position:
               chr25:2002076-2002247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               617-781
               

               Cow position:
               chr25:23821360-23821510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               605-775
               

               Cow position:
               chr26:27937491-27937660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               605-780
               

               Cow position:
               chr26:30401591-30401762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               605-781
               

               Cow position:
               chr26:5314181-5314350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               605-781
               

               Cow position:
               chr26:5835194-5835022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr26:18373162-18372990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr26:32073536-32073363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               623-781
               

               Cow position:
               chr26:20739702-20739856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               581-781
               

               Cow position:
               chr27:16591157-16591358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               605-749
               

               Cow position:
               chr27:20255123-20254981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-779
               

               Cow position:
               chr27:31545540-31545366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 131
               

               Conread position:
               605-781
               

               Cow position:
               chr27:15511849-15512022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               167, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr27:23087159-23086992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-784
               

               Cow position:
               chr27:20009791-20009967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               617-784
               

               Cow position:
               chr27:23996142-23995982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               128, 5
               

               Conread position:
               581-778
               

               Cow position:
               chr28:5933215-5933416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               602-780
               

               Cow position:
               chr28:19219922-19220098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               605-781
               

               Cow position:
               chr28:6951880-6951712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr28:10570137-10569964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               606-781
               

               Cow position:
               chr28:25581306-25581478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               130, 39
               

               Conread position:
               648-781
               

               Cow position:
               chr28:33064590-33064722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               416-576
               

               Cow position:
               chr29:27058508-27058350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               419-586
               

               Cow position:
               chr29:39532599-39532433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               600-781
               

               Cow position:
               chr29:22690017-22689837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 45
               

               Conread position:
               605-753
               

               Cow position:
               chr29:43153106-43152961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               605-777
               

               Cow position:
               chr29:10625916-10625747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               102, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr29:1447137-1447311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr29:1586364-1586194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr29:15521365-15521186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr29:18444948-18445117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               605-781
               

               Cow position:
               chr29:38262984-38262807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               140, 40
               

               Conread position:
               606-776
               

               Cow position:
               chr29:39532372-39532203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               607-753
               

               Cow position:
               chr29:30721987-30721838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               607-781
               

               Cow position:
               chr29:7621768-7621941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               609-781
               

               Cow position:
               chr29:31177400-31177568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               610-781
               

               Cow position:
               chr29:39296084-39295915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               615-780
               

               Cow position:
               chr29:13500700-13500863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               110, 32
               

               Conread position:
               623-776
               

               Cow position:
               chr29:27475613-27475764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               403-576
               

               Cow position:
               chr3:83459217-83459043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               563-780
               

               Cow position:
               chr3:20351864-20351651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               576-744
               

               Cow position:
               chr3:17615779-17615608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               577-781
               

               Cow position:
               chr3:48244041-48244251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               602-781
               

               Cow position:
               chr3:72884841-72884663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               604-781
               

               Cow position:
               chr3:6559236-6559416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr3:63998212-63998028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               605-755
               

               Cow position:
               chr3:81080707-81080853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-779
               

               Cow position:
               chr3:4446240-4446410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr3:8146898-8147069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               131, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr3:8708666-8708838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr3:11952163-11952340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr3:16574598-16574425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr3:23178571-23178397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr3:31110343-31110168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               84, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr3:53211198-53211024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr3:83980920-83981092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               605-784
               

               Cow position:
               chr3:23187337-23187149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 160
               

               Conread position:
               610-781
               

               Cow position:
               chr3:45948823-45948655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               615-781
               

               Cow position:
               chr3:63151801-63151967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               651-777
               

               Cow position:
               chr3:28595695-28595819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               92, 12
               

               Conread position:
               653-781
               

               Cow position:
               chr3:53910652-53910526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               406-576
               

               Cow position:
               chr4:36506036-36505868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               419-576
               

               Cow position:
               chr4:4126097-4125938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               60, 80
               

               Conread position:
               577-781
               

               Cow position:
               chr4:37548623-37548406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               581-781
               

               Cow position:
               chr4:66853820-66854021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               604-781
               

               Cow position:
               chr4:165626-165451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               143, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr4:35070421-35070596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               605-727
               

               Cow position:
               chr4:4020608-4020484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               605-729
               

               Cow position:
               chr4:14947450-14947570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               605-776
               

               Cow position:
               chr4:4032214-4032370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-779
               

               Cow position:
               chr4:37857334-37857159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr4:3901821-3901994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr4:26617590-26617764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr4:33002614-33002789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               605-781
               

               Cow position:
               chr4:43283868-43284041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               129, 42
               

               Conread position:
               605-784
               

               Cow position:
               chr4:37509765-37509591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               605-785
               

               Cow position:
               chr4:18797561-18797381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               605-786
               

               Cow position:
               chr4:55648037-55647866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               606-731
               

               Cow position:
               chr4:37343428-37343552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               606-781
               

               Cow position:
               chr4:30016840-30016672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               606-781
               

               Cow position:
               chr4:54379182-54379354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               610-774
               

               Cow position:
               chr4:23613093-23613253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               611-781
               

               Cow position:
               chr4:54377547-54377380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               654-781
               

               Cow position:
               chr4:59577458-59577332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr5:45196334-45196491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               415-781
               

               Cow position:
               chr5:42710007-42709621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               602-781
               

               Cow position:
               chr5:3396607-3396430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               161, 25
               

               Conread position:
               604-739
               

               Cow position:
               chr5:49610009-49610142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               604-781
               

               Cow position:
               chr5:47838010-47837834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               605-779
               

               Cow position:
               chr5:6390762-6390591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               150, 9
               

               Conread position:
               605-781
               

               Cow position:
               chr5:2188695-2188866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr5:39338685-39338861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               605-781
               

               Cow position:
               chr5:41330544-41330365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               605-781
               

               Cow position:
               chr5:51247625-51247794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               607-781
               

               Cow position:
               chr5:75866846-75867017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               610-743
               

               Cow position:
               chr5:43401197-43401067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               625-776
               

               Cow position:
               chr5:39084001-39083853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               654-782
               

               Cow position:
               chr5:43087157-43087029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               412-576
               

               Cow position:
               chr6:26638100-26637937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               425-576
               

               Cow position:
               chr6:61811296-61811442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               577-729
               

               Cow position:
               chr6:682053-682203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               578-748
               

               Cow position:
               chr6:61811468-61811641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               601-777
               

               Cow position:
               chr6:61130772-61130946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               605-780
               

               Cow position:
               chr6:35751373-35751206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr6:417819-417647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr6:17291619-17291443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 38
               

               Conread position:
               605-781
               

               Cow position:
               chr6:55972492-55972656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr6:67981543-67981371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               141, 38
               

               Conread position:
               605-782
               

               Cow position:
               chr6:5338497-5338322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               126, 40
               

               Conread position:
               610-781
               

               Cow position:
               chr6:59218801-59218977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               610-782
               

               Cow position:
               chr6:35187629-35187797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               615-781
               

               Cow position:
               chr6:50856045-50855875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               412-575
               

               Cow position:
               chr7:42325020-42325181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               415-575
               

               Cow position:
               chr7:43987207-43987374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               422-572
               

               Cow position:
               chr7:27092631-27092478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               423-576
               

               Cow position:
               chr7:24034961-24035110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               96, 45
               

               Conread position:
               574-781
               

               Cow position:
               chr7:59514928-59514717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               605-754
               

               Cow position:
               chr7:43987441-43987580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               605-777
               

               Cow position:
               chr7:31947174-31947347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               605-777
               

               Cow position:
               chr7:50740973-50740803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-780
               

               Cow position:
               chr7:42325251-42325422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr7:21038825-21038646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               605-781
               

               Cow position:
               chr7:23653219-23653393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               605-781
               

               Cow position:
               chr7:24035179-24035354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 9
               

               Conread position:
               606-781
               

               Cow position:
               chr7:40960837-40961015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               156, 39
               

               Conread position:
               610-781
               

               Cow position:
               chr7:11881729-11881561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               610-782
               

               Cow position:
               chr7:69123221-69123391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               614-781
               

               Cow position:
               chr7:26776347-26776516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               617-772
               

               Cow position:
               chr7:27107434-27107586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               654-781
               

               Cow position:
               chr7:9434406-9434279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-558
               

               Cow position:
               chr8:49364556-49364401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               415-576
               

               Cow position:
               chr8:8968890-8969048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               418-575
               

               Cow position:
               chr8:5246666-5246821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               578-781
               

               Cow position:
               chr8:40114450-40114650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               598-781
               

               Cow position:
               chr8:31732056-31732242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               599-781
               

               Cow position:
               chr8:8969606-8969783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               604-780
               

               Cow position:
               chr8:17928604-17928431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr8:24959471-24959646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               605-717
               

               Cow position:
               chr8:39059814-39059921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               605-754
               

               Cow position:
               chr8:5671220-5671071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               605-772
               

               Cow position:
               chr8:7004215-7004052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-779
               

               Cow position:
               chr8:60000869-60000705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               605-783
               

               Cow position:
               chr8:60577851-60578022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-784
               

               Cow position:
               chr8:848643-848820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-803
               

               Cow position:
               chr8:2957723-2957920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 40
               

               Conread position:
               607-781
               

               Cow position:
               chr8:48674197-48674369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               608-781
               

               Cow position:
               chr8:1679751-1679580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               610-779
               

               Cow position:
               chr8:45562091-45561920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               109, 35
               

               Conread position:
               610-781
               

               Cow position:
               chr8:25386667-25386836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               617-795
               

               Cow position:
               chr8:1524908-1525085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 28
               

               Conread position:
               623-781
               

               Cow position:
               chr8:46794895-46795054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 135
               

               Conread position:
               623-782
               

               Cow position:
               chr8:33161116-33161273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               645-779
               

               Cow position:
               chr8:62069898-62070031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               645-781
               

               Cow position:
               chr8:48454762-48454626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               602-781
               

               Cow position:
               chr9:11315718-11315896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               604-781
               

               Cow position:
               chr9:6163873-6164055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               604-781
               

               Cow position:
               chr9:34315146-34315330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               605-781
               

               Cow position:
               chr9:9561888-9561714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               605-781
               

               Cow position:
               chr9:10772889-10773063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               605-781
               

               Cow position:
               chr9:10896690-10896509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               605-781
               

               Cow position:
               chr9:20984081-20984256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 40
               

               Conread position:
               605-781
               

               Cow position:
               chr9:25032601-25032429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-781
               

               Cow position:
               chr9:31644087-31643902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 160
               

               Conread position:
               605-781
               

               Cow position:
               chr9:55033167-55033344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               606-780
               

               Cow position:
               chr9:6656052-6655882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               606-780
               

               Cow position:
               chr9:44718194-44718023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               610-781
               

               Cow position:
               chr9:13453556-13453390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               610-781
               

               Cow position:
               chr9:62568639-62568473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               610-784
               

               Cow position:
               chr9:10894489-10894659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               611-781
               

               Cow position:
               chr9:6317111-6316936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               76, 34
               

               Conread position:
               619-781
               

               Cow position:
               chr9:6721529-6721370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               38, 23
               

               Conread position:
               415-575
               

               Cow position:
               chrX:1340749-1340582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               418-576
               

               Cow position:
               chrX:17483164-17483014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               577-772
               

               Cow position:
               chrX:802833-803033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               581-744
               

               Cow position:
               chrX:31443849-31444014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               602-779
               

               Cow position:
               chrX:38739912-38740083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               604-780
               

               Cow position:
               chrX:24630965-24631136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               140, 35
               

               Conread position:
               605-777
               

               Cow position:
               chrX:23364310-23364139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               605-781
               

               Cow position:
               chrX:1340509-1340340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-781
               

               Cow position:
               chrX:31908954-31908781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               605-781
               

               Cow position:
               chrX:31919153-31918982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               605-781
               

               Cow position:
               chrX:42549725-42549898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               605-782
               

               Cow position:
               chrX:29774620-29774793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               140, 12
               

               Conread position:
               606-780
               

               Cow position:
               chrX:14214465-14214293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               609-781
               

               Cow position:
               chrX:38737029-38736858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               135, 36
               

               Conread position:
               610-781
               

               Cow position:
               chrX:25219123-25219292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               610-781
               

               Cow position:
               chrX:42915690-42915855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               623-729
               

               Cow position:
               chrX:4547131-4547026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 0
Conread position:	411-576
Cow position:	chr10:21341001-21341173 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	127
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	62, 111
Conread position:	412-576
Cow position:	chr10:53822522-53822361 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	122
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	65, 0
Conread position:	415-575
Cow position:	chr10:69632923-69632766 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	120
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	72, 0
Conread position:	415-781
Cow position:	chr10:21010918-21010535 (view UCSC Genome Browser custom track)
Alignm length:	390
Alignm identity:	281
Alignm E-value:	0
Alignm gaps (pig, cow):	163, 35
Conread position:	422-581
Cow position:	chr10:14606503-14606348 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	117
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	46, 0
Conread position:	602-781
Cow position:	chr10:21341238-21341416 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	136
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	95, 44
Conread position:	605-771
Cow position:	chr10:60963279-60963113 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	127
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	84, 38
Conread position:	605-777
Cow position:	chr10:50564494-50564662 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	138
Alignm E-value:	9e-37
Alignm gaps (pig, cow):	40, 0
Conread position:	605-781
Cow position:	chr10:9108969-9109140 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	134
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	12, 35
Conread position:	605-804
Cow position:	chr10:45267535-45267329 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	156
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	81, 32
Conread position:	606-781
Cow position:	chr10:9372523-9372697 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	131
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	48, 37
Conread position:	606-804
Cow position:	chr10:55143169-55143370 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	145
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	45, 35
Conread position:	614-781
Cow position:	chr10:69632693-69632531 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	136
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	27, 0
Conread position:	616-772
Cow position:	chr10:14894464-14894617 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	113
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	29, 0
Conread position:	643-781
Cow position:	chr10:48450504-48450372 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	106
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	75, 0
Conread position:	402-573
Cow position:	chr11:48073979-48074148 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	128
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	66, 0
Conread position:	416-575
Cow position:	chr11:31348876-31349037 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	120
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	69, 0
Conread position:	422-751
Cow position:	chr11:31815254-31815597 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	235
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	64, 54
Conread position:	577-781
Cow position:	chr11:58354865-58355069 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	162
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	54, 41
Conread position:	586-781
Cow position:	chr11:19228318-19228514 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	149
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	54, 34