Cow genome map

Conread name: Ss1.1-rjca10c_j9.5

Conread position: 120-1225
Cow position: chr1:93219643-93218528 (view UCSC Genome Browser custom track)
Alignm length: 1123
Alignm identity: 912
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 228

Conread position: 303-1224
Cow position: chr1:63254709-63255624 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 398

Conread position: 93-222
Cow position: chr10:19088069-19087940 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 112
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 220-547
Cow position: chr10:19086812-19086485 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 543-713
Cow position: chr10:19085776-19085606 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 143
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 706-901
Cow position: chr10:19085485-19085290 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 895-1082
Cow position: chr10:19084515-19084328 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1081-1226
Cow position: chr10:19083781-19083636 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 127
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 349-461
Cow position: chr11:9335607-9335719 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 100
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 546-708
Cow position: chr11:9337777-9337939 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 138
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 707-901
Cow position: chr11:9338701-9338895 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 895-1082
Cow position: chr11:9340532-9340719 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1081-1227
Cow position: chr11:9343069-9343215 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 243-1224
Cow position: chr16:36112415-36111440 (view UCSC Genome Browser custom track)
Alignm length: 986
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 469

Conread position: 459-926
Cow position: chr19:45155242-45154776 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 446

Conread position: 736-1180
Cow position: chr19:26728369-26727931 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 900-1082
Cow position: chr19:45154694-45154512 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1081-1246
Cow position: chr19:45154425-45154260 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 318-1200
Cow position: chr22:38195947-38195098 (view UCSC Genome Browser custom track)
Alignm length: 887
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 276

Conread position: 120-377
Cow position: chr24:27075940-27076197 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 238, 63

Conread position: 219-465
Cow position: chr25:37061288-37061534 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 459-901
Cow position: chr25:37061968-37062410 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 84-222
Cow position: chr26:5421813-5421675 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 220-356
Cow position: chr26:5420326-5420189 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 118
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 0

Conread position: 349-461
Cow position: chr26:5417264-5417152 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 525-649
Cow position: chr26:14057000-14057124 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 538-713
Cow position: chr26:5414395-5414220 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 705-908
Cow position: chr26:5412437-5412234 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 900-1082
Cow position: chr26:5410967-5410785 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1081-1226
Cow position: chr26:5408175-5408030 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 133
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 78-222
Cow position: chr28:456063-456207 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 137
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 219-547
Cow position: chr28:456309-456637 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 546-715
Cow position: chr28:456739-456908 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 703-901
Cow position: chr28:456997-457195 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 824-1082
Cow position: chr28:457212-457471 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1081-1478
Cow position: chr28:457556-457950 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 299

Conread position: 102-1224
Cow position: chr3:54413015-54414137 (view UCSC Genome Browser custom track)
Alignm length: 1123
Alignm identity: 903
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 291-1224
Cow position: chr7:14383661-14382734 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 408