Cow genome map
| Conread name: | Ss1.1-rjca15c_n11.5 |
| Conread position: | 316-654 |
| Cow position: | chr1:58604338-58604689 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 201 |
| Conread position: | 372-670 |
| Cow position: | chr1:71024039-71024356 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 388-670 |
| Cow position: | chr1:49184385-49184086 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 388-670 |
| Cow position: | chr1:57385946-57385648 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 399-659 |
| Cow position: | chr1:79685614-79685875 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 400-591 |
| Cow position: | chr1:78068385-78068581 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 460-670 |
| Cow position: | chr1:43454751-43454970 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 157 |
| Conread position: | 388-588 |
| Cow position: | chr10:52698564-52698775 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 388-663 |
| Cow position: | chr10:23524325-23524619 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 395-667 |
| Cow position: | chr10:18218274-18217989 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 395-670 |
| Cow position: | chr10:54503257-54503541 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 411-670 |
| Cow position: | chr10:10118755-10118474 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 433-656 |
| Cow position: | chr10:2647964-2647734 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 157 |
| Conread position: | 458-659 |
| Cow position: | chr10:45620352-45620154 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 1-661 |
| Cow position: | chr11:1741764-1741109 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 30 |
| Conread position: | 388-669 |
| Cow position: | chr11:79870168-79869874 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 388-670 |
| Cow position: | chr11:64469756-64469452 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 270 |
| Conread position: | 390-657 |
| Cow position: | chr11:81342876-81343166 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 239 |
| Conread position: | 390-663 |
| Cow position: | chr11:29810958-29810670 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 395-588 |
| Cow position: | chr11:12070455-12070654 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 395-670 |
| Cow position: | chr11:47981362-47981650 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 119 |
| Conread position: | 398-571 |
| Cow position: | chr11:4435598-4435414 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 399-591 |
| Cow position: | chr11:28024705-28024900 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 418-670 |
| Cow position: | chr11:35065824-35066091 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 423-670 |
| Cow position: | chr11:41361665-41361921 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 395-670 |
| Cow position: | chr12:4106859-4107153 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 390-670 |
| Cow position: | chr13:36551333-36551621 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 362-670 |
| Cow position: | chr14:15038595-15038935 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 375-670 |
| Cow position: | chr14:32274126-32273830 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 388-670 |
| Cow position: | chr14:11638350-11638633 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 390-588 |
| Cow position: | chr14:18958301-18958510 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 453-670 |
| Cow position: | chr14:19603318-19603545 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 220 |
| Conread position: | 314-670 |
| Cow position: | chr15:26887994-26887610 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 366-666 |
| Cow position: | chr15:6859686-6859369 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 388-651 |
| Cow position: | chr15:34472355-34472072 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-670 |
| Cow position: | chr15:35189957-35189653 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 390-647 |
| Cow position: | chr15:30235420-30235152 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 390-667 |
| Cow position: | chr15:44141242-44141537 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 390-669 |
| Cow position: | chr15:23345439-23345158 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 390-670 |
| Cow position: | chr15:22783059-22782763 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 388-666 |
| Cow position: | chr16:54484415-54484114 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-672 |
| Cow position: | chr17:30882283-30882582 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 280 |
| Conread position: | 390-670 |
| Cow position: | chr17:9878272-9877987 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 215 |
| Conread position: | 395-670 |
| Cow position: | chr17:14204076-14204363 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 395-670 |
| Cow position: | chr17:41099509-41099209 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 398-668 |
| Cow position: | chr17:7737437-7737160 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 47, 151 |
| Conread position: | 400-670 |
| Cow position: | chr17:5639751-5639465 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 400-670 |
| Cow position: | chr17:5669980-5669694 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 311-670 |
| Cow position: | chr18:24240999-24240608 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 195 |
| Conread position: | 379-671 |
| Cow position: | chr18:50594944-50594628 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 388-568 |
| Cow position: | chr18:6713608-6713799 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 390-651 |
| Cow position: | chr18:30381074-30381359 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 395-588 |
| Cow position: | chr18:23048839-23049032 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 418-670 |
| Cow position: | chr18:13894477-13894208 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 215 |
| Conread position: | 420-670 |
| Cow position: | chr18:22404108-22403842 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 388-666 |
| Cow position: | chr19:22443527-22443240 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 395-652 |
| Cow position: | chr19:24327048-24327322 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 400-596 |
| Cow position: | chr19:8838981-8838775 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 485-672 |
| Cow position: | chr19:23855232-23855041 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 287-667 |
| Cow position: | chr2:14850948-14851349 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 297-670 |
| Cow position: | chr2:56548963-56549373 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 362-672 |
| Cow position: | chr2:4870452-4870127 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 388-670 |
| Cow position: | chr2:33732101-33732398 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 250 |
| Conread position: | 388-670 |
| Cow position: | chr2:58335860-58335564 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 247 |
| Conread position: | 390-573 |
| Cow position: | chr2:64737828-64738019 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 183 |
| Conread position: | 390-670 |
| Cow position: | chr2:37119625-37119917 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 395-666 |
| Cow position: | chr2:80408290-80407997 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 395-670 |
| Cow position: | chr2:58662624-58662923 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 397-670 |
| Cow position: | chr2:52484233-52484525 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 399-670 |
| Cow position: | chr2:20117926-20117644 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 194 |
| Conread position: | 453-655 |
| Cow position: | chr2:14260697-14260918 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 295-663 |
| Cow position: | chr20:13128658-13128257 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 390-670 |
| Cow position: | chr20:6204129-6203828 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 397-640 |
| Cow position: | chr20:14287455-14287704 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 388-670 |
| Cow position: | chr21:17502891-17503199 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 390-649 |
| Cow position: | chr21:29435287-29435014 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 390-669 |
| Cow position: | chr21:21655547-21655250 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 438-669 |
| Cow position: | chr21:8286662-8286419 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 388-670 |
| Cow position: | chr22:22924442-22924131 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 290 |
| Conread position: | 395-668 |
| Cow position: | chr22:36348237-36347943 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 42, 163 |
| Conread position: | 400-669 |
| Cow position: | chr22:31193090-31192796 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 280-670 |
| Cow position: | chr23:18470406-18470004 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 390-599 |
| Cow position: | chr23:41183092-41183310 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 388-656 |
| Cow position: | chr24:41310086-41309792 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-670 |
| Cow position: | chr24:32973440-32973745 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 395-669 |
| Cow position: | chr24:40775237-40774953 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 250 |
| Conread position: | 287-668 |
| Cow position: | chr25:29885295-29884882 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 162 |
| Conread position: | 398-670 |
| Cow position: | chr25:16059599-16059881 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 401-670 |
| Cow position: | chr25:22122702-22122422 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 453-588 |
| Cow position: | chr25:4489656-4489521 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 294-668 |
| Cow position: | chr26:17464728-17464325 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 311-671 |
| Cow position: | chr26:4614775-4614400 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 106 |
| Conread position: | 387-659 |
| Cow position: | chr26:6492271-6492561 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 120 |
| Conread position: | 388-670 |
| Cow position: | chr26:31607030-31606728 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 390-644 |
| Cow position: | chr28:24088784-24088507 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 55, 269 |
| Conread position: | 390-662 |
| Cow position: | chr28:4378103-4377819 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 409-591 |
| Cow position: | chr28:21123308-21123118 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 173 |
| Conread position: | 388-670 |
| Cow position: | chr29:26159924-26160227 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 390-667 |
| Cow position: | chr29:29951258-29950957 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 410-586 |
| Cow position: | chr29:32488-32307 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 460-670 |
| Cow position: | chr29:36612666-36612886 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 388-591 |
| Cow position: | chr3:2421731-2421521 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 112 |
| Conread position: | 390-581 |
| Cow position: | chr3:1935808-1936008 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 391-662 |
| Cow position: | chr3:27321218-27321504 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 179 |
| Conread position: | 396-670 |
| Cow position: | chr3:55687880-55688177 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 397-670 |
| Cow position: | chr3:75161755-75162046 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 400-668 |
| Cow position: | chr3:43208221-43208508 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 409-556 |
| Cow position: | chr3:71277336-71277488 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 248-535 |
| Cow position: | chr4:49675493-49675180 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 392-668 |
| Cow position: | chr4:16608010-16608298 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 395-650 |
| Cow position: | chr4:49159958-49160227 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 395-670 |
| Cow position: | chr4:53917387-53917095 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 453-669 |
| Cow position: | chr4:29650738-29650510 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 313-662 |
| Cow position: | chr5:41573115-41572757 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 390-670 |
| Cow position: | chr5:60286693-60286999 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 395-555 |
| Cow position: | chr5:35434526-35434692 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 395-670 |
| Cow position: | chr5:62231482-62231184 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 400-670 |
| Cow position: | chr5:46686397-46686675 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 388-669 |
| Cow position: | chr6:31372973-31373279 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 395-555 |
| Cow position: | chr6:8626829-8626999 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 395-670 |
| Cow position: | chr6:21621041-21621338 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 398-670 |
| Cow position: | chr6:19032550-19032262 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 409-670 |
| Cow position: | chr6:37450864-37451134 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 304-670 |
| Cow position: | chr7:36955428-36955043 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 388-595 |
| Cow position: | chr7:21816750-21816964 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 175 |
| Conread position: | 388-670 |
| Cow position: | chr7:13630563-13630285 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 390-670 |
| Cow position: | chr7:35153369-35153670 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 56, 195 |
| Conread position: | 395-662 |
| Cow position: | chr7:8116640-8116356 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 395-670 |
| Cow position: | chr7:18409490-18409781 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 395-670 |
| Cow position: | chr7:18420442-18420151 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 397-595 |
| Cow position: | chr7:8832042-8831843 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 294-588 |
| Cow position: | chr8:40437066-40436756 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 409-657 |
| Cow position: | chr8:55498911-55498657 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 443-670 |
| Cow position: | chr8:3176147-3175907 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 292-600 |
| Cow position: | chr9:17830805-17830489 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 388-565 |
| Cow position: | chr9:19441080-19441267 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-588 |
| Cow position: | chr9:34424497-34424286 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-662 |
| Cow position: | chr9:21106020-21105723 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 390-670 |
| Cow position: | chr9:38457058-38457358 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 195 |
| Conread position: | 305-664 |
| Cow position: | chrX:9278339-9277960 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 388-588 |
| Cow position: | chrX:11417290-11417495 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 388-664 |
| Cow position: | chrX:27479370-27479095 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 389-670 |
| Cow position: | chrX:42339596-42339314 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 197 |
| Conread position: | 390-670 |
| Cow position: | chrX:8903244-8902944 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 147 |