Cow genome map
| Conread name: | Ss1.1-rjca17c_g8.5 |
| Conread position: | 1-197 |
| Cow position: | chr1:57967738-57967926 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 248-391 |
| Cow position: | chr1:57967899-57968037 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 4-206 |
| Cow position: | chr13:48444522-48444728 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 294-386 |
| Cow position: | chr13:48444727-48444819 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-206 |
| Cow position: | chr15:7507271-7507055 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 209 |
| Conread position: | 1-206 |
| Cow position: | chr17:18501963-18501747 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 139, 195 |
| Conread position: | 4-144 |
| Cow position: | chr17:38760378-38760236 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 259-392 |
| Cow position: | chr17:18501772-18501641 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-182 |
| Cow position: | chr21:24172540-24172728 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 136, 111 |
| Conread position: | 259-383 |
| Cow position: | chr21:24172726-24172849 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 258-393 |
| Cow position: | chr23:19867538-19867409 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 1-101 |
| Cow position: | chr25:3080782-3080882 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-375 |
| Cow position: | chr25:3081102-3081392 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 165 |
| Conread position: | 1-206 |
| Cow position: | chr3:69405883-69406096 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 259-389 |
| Cow position: | chr3:69406071-69406202 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-197 |
| Cow position: | chr5:18065148-18065358 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-206 |
| Cow position: | chr5:27300165-27299950 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 93 |
| Conread position: | 6-145 |
| Cow position: | chr5:22623461-22623320 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 248-381 |
| Cow position: | chr5:18065331-18065462 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 126, 11 |
| Conread position: | 259-388 |
| Cow position: | chr5:27299975-27299845 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 259-401 |
| Cow position: | chr5:22623265-22623123 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-206 |
| Cow position: | chr8:36318780-36318991 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 204 |
| Conread position: | 259-401 |
| Cow position: | chr8:36318966-36319110 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 129 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 288-389 |
| Cow position: | chr8:37546062-37546163 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-194 |
| Cow position: | chrX:28869373-28869169 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 91 |
| Conread position: | 259-388 |
| Cow position: | chrX:28869183-28869054 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 120 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |