Cow genome map
| Conread name: | Ss1.1-rjej04b_k1.5 |
| Conread position: | 1-212 |
| Cow position: | chr1:13556974-13556760 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 1-257 |
| Cow position: | chr1:39297097-39296834 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 242 |
| Conread position: | 7-202 |
| Cow position: | chr1:26529882-26529684 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 89, 73 |
| Conread position: | 11-188 |
| Cow position: | chr1:35039858-35039688 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-189 |
| Cow position: | chr1:49746164-49746348 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 15-209 |
| Cow position: | chr1:65105273-65105074 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 18-214 |
| Cow position: | chr1:15815613-15815422 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 151 |
| Conread position: | 1-141 |
| Cow position: | chr10:39391911-39392051 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 97 |
| Conread position: | 1-188 |
| Cow position: | chr10:42990094-42990290 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-196 |
| Cow position: | chr10:65093087-65092894 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 102 |
| Conread position: | 71-210 |
| Cow position: | chr10:52433687-52433543 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 1-229 |
| Cow position: | chr11:21854606-21854376 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 18-209 |
| Cow position: | chr11:84868179-84868375 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 1-213 |
| Cow position: | chr12:11664068-11663854 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 8-208 |
| Cow position: | chr14:47408482-47408283 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 107 |
| Conread position: | 13-210 |
| Cow position: | chr14:10597281-10597087 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 1-210 |
| Cow position: | chr15:25311466-25311255 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 90 |
| Conread position: | 1-209 |
| Cow position: | chr17:8931090-8930883 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 1-215 |
| Cow position: | chr17:8117793-8118009 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-188 |
| Cow position: | chr2:18159996-18160186 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 88, 24 |
| Conread position: | 7-210 |
| Cow position: | chr2:21294581-21294371 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 1-203 |
| Cow position: | chr20:5925321-5925114 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 28-215 |
| Cow position: | chr21:24606506-24606311 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-214 |
| Cow position: | chr24:21125549-21125329 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 28-209 |
| Cow position: | chr28:30504869-30504690 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 1-213 |
| Cow position: | chr29:21414999-21414781 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 3-214 |
| Cow position: | chr3:40803790-40803996 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 187, 84 |
| Conread position: | 28-208 |
| Cow position: | chr3:23932174-23931994 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 28-210 |
| Cow position: | chr3:51968039-51968230 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 16-204 |
| Cow position: | chr4:31695251-31695066 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 8-210 |
| Cow position: | chr6:35527107-35527317 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 139 |
| Conread position: | 1-208 |
| Cow position: | chr7:23971088-23970876 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 13-194 |
| Cow position: | chr8:53560151-53560338 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-196 |
| Cow position: | chr9:23390300-23390099 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 185 |
| Conread position: | 20-208 |
| Cow position: | chrX:18560557-18560366 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 168 |