Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rlin09_o8.5
        

               Conread position:
               1-128
               

               Cow position:
               chr1:21561253-21561126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr1:31764845-31764984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 127
               

               Conread position:
               1-144
               

               Cow position:
               chr1:38706621-38706759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr1:64803864-64804023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 130
               

               Conread position:
               2-122
               

               Cow position:
               chr1:83677090-83677213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               2-126
               

               Cow position:
               chr1:95514072-95513948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-158
               

               Cow position:
               chr1:89146640-89146794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               3-108
               

               Cow position:
               chr1:12390251-12390356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               3-159
               

               Cow position:
               chr1:1496296-1496452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 111
               

               Conread position:
               3-178
               

               Cow position:
               chr1:25076000-25076176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               113, 138
               

               Conread position:
               4-132
               

               Cow position:
               chr1:42175959-42175832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               5-104
               

               Cow position:
               chr1:42537073-42537171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr1:72422177-72422328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               6-160
               

               Cow position:
               chr1:95153102-95152950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               113, 121
               

               Conread position:
               8-160
               

               Cow position:
               chr1:22824135-22823984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               98, 127
               

               Conread position:
               9-104
               

               Cow position:
               chr1:196781-196876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-100
               

               Cow position:
               chr1:66306392-66306303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-159
               

               Cow position:
               chr1:60403991-60403846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               18-160
               

               Cow position:
               chr1:54258787-54258645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               19-160
               

               Cow position:
               chr1:77685763-77685902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               29-111
               

               Cow position:
               chr1:54267733-54267817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               76
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               32-160
               

               Cow position:
               chr1:84815336-84815209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               3-132
               

               Cow position:
               chr10:54263426-54263297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr10:10027775-10027620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr10:36855927-36856082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               5-117
               

               Cow position:
               chr10:59663738-59663850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-132
               

               Cow position:
               chr10:11966645-11966773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               5-157
               

               Cow position:
               chr10:15601980-15602131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               5-160
               

               Cow position:
               chr10:6719176-6719023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               119, 130
               

               Conread position:
               6-158
               

               Cow position:
               chr10:17518647-17518797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               8-160
               

               Cow position:
               chr10:38370256-38370405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               13-158
               

               Cow position:
               chr10:19238688-19238830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               17-160
               

               Cow position:
               chr10:16830197-16830337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               29-111
               

               Cow position:
               chr10:1978497-1978579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               74
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-111
               

               Cow position:
               chr10:52824998-52825080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               75
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-165
               

               Cow position:
               chr10:61509772-61509899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               1-101
               

               Cow position:
               chr11:17991437-17991337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr11:32254004-32254159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               2-155
               

               Cow position:
               chr11:21590600-21590446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               25, 141
               

               Conread position:
               2-160
               

               Cow position:
               chr11:87171867-87172021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-111
               

               Cow position:
               chr11:36182900-36182793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-139
               

               Cow position:
               chr11:16315083-16314948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               4-155
               

               Cow position:
               chr11:33271637-33271491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr11:83028200-83028049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               99, 72
               

               Conread position:
               5-111
               

               Cow position:
               chr11:65431724-65431618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr11:36361434-36361587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               6-104
               

               Cow position:
               chr11:50197306-50197404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-160
               

               Cow position:
               chr11:30165717-30165565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               7-201
               

               Cow position:
               chr11:62620580-62620391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               176, 22
               

               Conread position:
               8-160
               

               Cow position:
               chr11:24551595-24551444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               10-122
               

               Cow position:
               chr11:67537914-67538026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-160
               

               Cow position:
               chr11:42067047-42066920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               31-190
               

               Cow position:
               chr11:43594247-43594400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               32-160
               

               Cow position:
               chr11:33369332-33369206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr12:37718580-37718736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr12:13995606-13995763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 133
               

               Conread position:
               3-104
               

               Cow position:
               chr12:44877932-44877831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-111
               

               Cow position:
               chr12:31711696-31711803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr12:6719576-6719422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               5-108
               

               Cow position:
               chr12:38679234-38679130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr12:14360829-14360677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 78
               

               Conread position:
               6-111
               

               Cow position:
               chr12:35217848-35217953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-160
               

               Cow position:
               chr12:583320-583475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               7-111
               

               Cow position:
               chr12:4014238-4014343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr12:11168049-11167906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               111, 94
               

               Conread position:
               9-160
               

               Cow position:
               chr12:6187928-6188079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 120
               

               Conread position:
               14-160
               

               Cow position:
               chr12:22048101-22047956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               29-111
               

               Cow position:
               chr12:9791118-9791200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               74
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-160
               

               Cow position:
               chr12:3057249-3057122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr13:20654103-20653982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr13:28605636-28605491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr13:11146813-11146969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               3-106
               

               Cow position:
               chr13:24067454-24067351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-108
               

               Cow position:
               chr13:57475657-57475551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr13:8537579-8537734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               4-108
               

               Cow position:
               chr13:37555112-37555005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               4-158
               

               Cow position:
               chr13:45352789-45352941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               115, 123
               

               Conread position:
               4-160
               

               Cow position:
               chr13:21246951-21246797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr13:56019234-56019082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               7-165
               

               Cow position:
               chr13:26317126-26316969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               7-165
               

               Cow position:
               chr13:43576775-43576931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               8-111
               

               Cow position:
               chr13:17619359-17619462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-160
               

               Cow position:
               chr13:15993149-15993299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               9-108
               

               Cow position:
               chr13:14063754-14063655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-139
               

               Cow position:
               chr13:55327206-55327335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr13:19278862-19279007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               11-160
               

               Cow position:
               chr13:52929200-52929347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               26-165
               

               Cow position:
               chr13:43577771-43577908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1-106
               

               Cow position:
               chr14:12505803-12505700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr14:23682082-23682192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-158
               

               Cow position:
               chr14:28304973-28304818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 134
               

               Conread position:
               2-160
               

               Cow position:
               chr14:1708845-1708687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               4-160
               

               Cow position:
               chr14:33457227-33457074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr14:36559407-36559259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               6-158
               

               Cow position:
               chr14:5668302-5668151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 129
               

               Conread position:
               8-111
               

               Cow position:
               chr14:47224550-47224447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr14:29964840-29964989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               12-111
               

               Cow position:
               chr14:20110896-20110796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               13-156
               

               Cow position:
               chr14:26115886-26116027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               15-159
               

               Cow position:
               chr14:27364406-27364548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               17-170
               

               Cow position:
               chr14:2975254-2975104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               147, 12
               

               Conread position:
               1-104
               

               Cow position:
               chr15:26851362-26851259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-108
               

               Cow position:
               chr15:10199196-10199302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-181
               

               Cow position:
               chr15:12045678-12045502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               4-156
               

               Cow position:
               chr15:36435067-36435217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               115, 131
               

               Conread position:
               4-158
               

               Cow position:
               chr15:20534587-20534436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               5-110
               

               Cow position:
               chr15:12304505-12304610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-159
               

               Cow position:
               chr15:26380878-26380729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr15:23572819-23572670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               11-160
               

               Cow position:
               chr15:40562811-40562666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               12-111
               

               Cow position:
               chr15:23455534-23455432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               13-132
               

               Cow position:
               chr15:17866430-17866310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               13-160
               

               Cow position:
               chr15:19554052-19553908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               16-139
               

               Cow position:
               chr15:42142750-42142872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               17-160
               

               Cow position:
               chr15:17124593-17124452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               1-106
               

               Cow position:
               chr16:50010960-50011065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-133
               

               Cow position:
               chr16:25610253-25610121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-158
               

               Cow position:
               chr16:10011623-10011777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               118, 137
               

               Conread position:
               5-158
               

               Cow position:
               chr16:30054875-30055026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 122
               

               Conread position:
               5-160
               

               Cow position:
               chr16:7665863-7665711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               8-106
               

               Cow position:
               chr16:13507064-13507160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               8-123
               

               Cow position:
               chr16:54693000-54692885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-158
               

               Cow position:
               chr16:23034047-23033903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               14-124
               

               Cow position:
               chr16:8837152-8837265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               14-160
               

               Cow position:
               chr16:21442394-21442537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               15-160
               

               Cow position:
               chr16:29311742-29311597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-160
               

               Cow position:
               chr16:47274511-47274653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               18-160
               

               Cow position:
               chr16:56082151-56082291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               19-160
               

               Cow position:
               chr16:24672650-24672789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               29-160
               

               Cow position:
               chr16:12324654-12324529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-103
               

               Cow position:
               chr17:24766656-24766757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr17:32027179-32027312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr17:15303705-15303862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               2-165
               

               Cow position:
               chr17:13940049-13940213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 130
               

               Conread position:
               3-160
               

               Cow position:
               chr17:6787205-6787050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr17:21236791-21236636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               4-104
               

               Cow position:
               chr17:21718732-21718832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-111
               

               Cow position:
               chr17:25118150-25118045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-128
               

               Cow position:
               chr17:5550863-5550742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               8-160
               

               Cow position:
               chr17:4817791-4817641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               10-160
               

               Cow position:
               chr17:36814624-36814475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               117, 126
               

               Conread position:
               12-111
               

               Cow position:
               chr17:3468008-3467909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-160
               

               Cow position:
               chr17:7571361-7571217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 120
               

               Conread position:
               17-160
               

               Cow position:
               chr17:15883927-15883785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               18-160
               

               Cow position:
               chr17:20359364-20359226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               29-165
               

               Cow position:
               chr17:3153328-3153466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr18:31556964-31557118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr18:21751574-21751418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr18:22045217-22045374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               3-157
               

               Cow position:
               chr18:37690345-37690191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 112
               

               Conread position:
               4-104
               

               Cow position:
               chr18:11312546-11312646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-104
               

               Cow position:
               chr18:20019500-20019401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr18:44514280-44514126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 130
               

               Conread position:
               6-108
               

               Cow position:
               chr18:22180592-22180694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr18:237927-238076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               13-158
               

               Cow position:
               chr18:52251672-52251815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               34-131
               

               Cow position:
               chr18:30359982-30360079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr19:14169224-14169335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               5-110
               

               Cow position:
               chr19:44572299-44572195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               5-154
               

               Cow position:
               chr19:23297949-23297802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr19:22871044-22871193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               6-111
               

               Cow position:
               chr19:35605244-35605349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-104
               

               Cow position:
               chr19:43498897-43498994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-111
               

               Cow position:
               chr19:38732347-38732244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-158
               

               Cow position:
               chr19:24068073-24068220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr19:51294080-51294226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               111, 115
               

               Conread position:
               13-160
               

               Cow position:
               chr19:41497440-41497584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 16
               

               Conread position:
               1-155
               

               Cow position:
               chr2:14855681-14855527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               26, 127
               

               Conread position:
               4-160
               

               Cow position:
               chr2:36124657-36124504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr2:72359406-72359559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               6-158
               

               Cow position:
               chr2:35935112-35934956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               97, 140
               

               Conread position:
               7-108
               

               Cow position:
               chr2:13672739-13672636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               7-160
               

               Cow position:
               chr2:29394784-29394935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               8-155
               

               Cow position:
               chr2:67810819-67810964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               11-104
               

               Cow position:
               chr2:81758303-81758210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-160
               

               Cow position:
               chr2:67302236-67302090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr2:72315594-72315738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               12-160
               

               Cow position:
               chr2:74198110-74198257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               15-160
               

               Cow position:
               chr2:13369871-13369728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               28-111
               

               Cow position:
               chr2:11435485-11435402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               74
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-112
               

               Cow position:
               chr2:7533581-7533664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               74
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-104
               

               Cow position:
               chr20:8556000-8556103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr20:2828046-2827898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr20:17733290-17733443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-165
               

               Cow position:
               chr20:41323093-41323253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               5-139
               

               Cow position:
               chr20:18500796-18500663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               6-155
               

               Cow position:
               chr20:23062419-23062271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               7-108
               

               Cow position:
               chr20:1009166-1009267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               9-111
               

               Cow position:
               chr20:4891856-4891958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-104
               

               Cow position:
               chr20:1640208-1640302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               12-165
               

               Cow position:
               chr20:24883101-24883253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               15-111
               

               Cow position:
               chr20:25351170-25351266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-160
               

               Cow position:
               chr20:19201786-19201647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-104
               

               Cow position:
               chr21:12074887-12074990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr21:31759936-31760088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-100
               

               Cow position:
               chr21:42341652-42341749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr21:40821606-40821758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               4-104
               

               Cow position:
               chr21:20174599-20174499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               4-160
               

               Cow position:
               chr21:3135579-3135732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 60
               

               Conread position:
               5-111
               

               Cow position:
               chr21:13656347-13656453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr21:9477448-9477300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               9-165
               

               Cow position:
               chr21:41829095-41829249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr21:18568357-18568502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               18-160
               

               Cow position:
               chr21:27810666-27810524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 113
               

               Conread position:
               1-160
               

               Cow position:
               chr22:14488162-14488005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr22:33447855-33448011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               5-110
               

               Cow position:
               chr22:10966356-10966251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-160
               

               Cow position:
               chr22:9075630-9075477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 108
               

               Conread position:
               7-160
               

               Cow position:
               chr22:27681942-27681791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               8-109
               

               Cow position:
               chr22:22972531-22972632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr22:6754048-6754196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr22:30607074-30606926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               10-158
               

               Cow position:
               chr22:35215766-35215620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr22:11790199-11790053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               16-111
               

               Cow position:
               chr22:33031018-33030923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-161
               

               Cow position:
               chr22:6610153-6610291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               29-111
               

               Cow position:
               chr22:16813991-16813909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               75
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-97
               

               Cow position:
               chr23:18748847-18748942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-104
               

               Cow position:
               chr23:22550817-22550714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-110
               

               Cow position:
               chr23:18604890-18605000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr23:307687-307531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr23:40348420-40348569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               6-111
               

               Cow position:
               chr23:40217125-40217231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               7-111
               

               Cow position:
               chr23:25884190-25884086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-111
               

               Cow position:
               chr23:12363396-12363499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               10-158
               

               Cow position:
               chr23:21539378-21539232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               15-160
               

               Cow position:
               chr23:3890356-3890499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               16-111
               

               Cow position:
               chr23:24685455-24685360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-112
               

               Cow position:
               chr23:24718601-24718684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr24:28303159-28303269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr24:885243-885396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr24:13948323-13948171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr24:18750911-18750756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               4-99
               

               Cow position:
               chr24:24490826-24490920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               10-160
               

               Cow position:
               chr24:30236065-30235919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               12-106
               

               Cow position:
               chr24:20537588-20537683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               18-160
               

               Cow position:
               chr24:16641100-16640959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               25-160
               

               Cow position:
               chr24:27066409-27066277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               2-111
               

               Cow position:
               chr25:6190877-6190768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               2-111
               

               Cow position:
               chr25:7012953-7012842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               2-111
               

               Cow position:
               chr25:22577083-22577193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               3-110
               

               Cow position:
               chr25:13822668-13822561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-155
               

               Cow position:
               chr25:13380375-13380525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               116, 132
               

               Conread position:
               4-160
               

               Cow position:
               chr25:22154253-22154095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               115, 140
               

               Conread position:
               6-111
               

               Cow position:
               chr25:9025343-9025235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               7-107
               

               Cow position:
               chr25:24147737-24147837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-101
               

               Cow position:
               chr25:14658907-14659000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr26:18651892-18651780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-161
               

               Cow position:
               chr26:17212440-17212282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 134
               

               Conread position:
               2-165
               

               Cow position:
               chr26:1041248-1041084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 135
               

               Conread position:
               8-160
               

               Cow position:
               chr26:3930293-3930444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 123
               

               Conread position:
               11-108
               

               Cow position:
               chr26:9535747-9535650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-162
               

               Cow position:
               chr26:8811701-8811559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               1-155
               

               Cow position:
               chr27:22583471-22583625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               1-160
               

               Cow position:
               chr27:28016006-28015849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               2-162
               

               Cow position:
               chr27:15350622-15350459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 142
               

               Conread position:
               3-104
               

               Cow position:
               chr27:19741662-19741559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               4-125
               

               Cow position:
               chr27:10404385-10404263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               4-154
               

               Cow position:
               chr27:9338253-9338103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr27:18791779-18791628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               6-155
               

               Cow position:
               chr27:27405335-27405188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               114, 129
               

               Conread position:
               7-160
               

               Cow position:
               chr27:23232648-23232799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               9-111
               

               Cow position:
               chr27:1122158-1122260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-134
               

               Cow position:
               chr27:2018840-2018717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               11-160
               

               Cow position:
               chr27:28922156-28922009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               112, 116
               

               Conread position:
               14-110
               

               Cow position:
               chr27:31210292-31210388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-159
               

               Cow position:
               chr27:21054200-21054342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               24-160
               

               Cow position:
               chr27:11208805-11208671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               29-164
               

               Cow position:
               chr27:178620-178750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr28:3257227-3257066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               1-160
               

               Cow position:
               chr28:6301316-6301159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr28:16964731-16964897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 113
               

               Conread position:
               3-160
               

               Cow position:
               chr28:8347964-8347809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr28:34830385-34830232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               4-160
               

               Cow position:
               chr28:751457-751303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               4-168
               

               Cow position:
               chr28:13356138-13356301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               9-155
               

               Cow position:
               chr28:659063-659212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               107, 83
               

               Conread position:
               11-111
               

               Cow position:
               chr28:4884032-4884131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               13-160
               

               Cow position:
               chr28:4077119-4077268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               13-160
               

               Cow position:
               chr28:16200520-16200665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               26-160
               

               Cow position:
               chr28:4282282-4282413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr29:4647985-4648138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               1-160
               

               Cow position:
               chr29:23142106-23142263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-165
               

               Cow position:
               chr29:4121081-4120920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               3-112
               

               Cow position:
               chr29:2720831-2720940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-132
               

               Cow position:
               chr29:28175880-28175751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr29:26777234-26777079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr29:31489547-31489392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 133
               

               Conread position:
               12-160
               

               Cow position:
               chr29:4440989-4441133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               17-159
               

               Cow position:
               chr29:17222627-17222485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               29-104
               

               Cow position:
               chr29:44681934-44682009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               70
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr3:3656718-3656564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr3:2675235-2675078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-104
               

               Cow position:
               chr3:53508843-53508742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr3:42933684-42933529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr3:59605043-59604892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               4-139
               

               Cow position:
               chr3:59926833-59926698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-152
               

               Cow position:
               chr3:66563986-66563839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               4-160
               

               Cow position:
               chr3:51608988-51609137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               4-165
               

               Cow position:
               chr3:76168427-76168588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               5-104
               

               Cow position:
               chr3:22924182-22924280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               5-123
               

               Cow position:
               chr3:33460400-33460518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-144
               

               Cow position:
               chr3:9662970-9663107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               10-160
               

               Cow position:
               chr3:23920232-23920380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr3:25735710-25735857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               12-162
               

               Cow position:
               chr3:79877222-79877073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               13-158
               

               Cow position:
               chr3:43388934-43389077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               13-159
               

               Cow position:
               chr3:4071578-4071722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               14-109
               

               Cow position:
               chr3:74584379-74584285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               14-155
               

               Cow position:
               chr3:59997944-59997804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               14-160
               

               Cow position:
               chr3:60371174-60371031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               17-160
               

               Cow position:
               chr3:11281956-11281815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               105, 118
               

               Conread position:
               25-160
               

               Cow position:
               chr3:61680496-61680363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               26-160
               

               Cow position:
               chr3:55730288-55730420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr4:56746213-56746055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               2-111
               

               Cow position:
               chr4:31761717-31761608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-158
               

               Cow position:
               chr4:45629826-45629979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-111
               

               Cow position:
               chr4:44040814-44040922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr4:36876639-36876791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 97
               

               Conread position:
               4-158
               

               Cow position:
               chr4:47305297-47305145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               6-163
               

               Cow position:
               chr4:26183350-26183194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 129
               

               Conread position:
               7-158
               

               Cow position:
               chr4:19496766-19496913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               117, 90
               

               Conread position:
               7-160
               

               Cow position:
               chr4:5790860-5790708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               8-144
               

               Cow position:
               chr4:42347698-42347566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               8-158
               

               Cow position:
               chr4:15439798-15439650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               8-158
               

               Cow position:
               chr4:47035508-47035657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 127
               

               Conread position:
               9-160
               

               Cow position:
               chr4:5250402-5250253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               10-111
               

               Cow position:
               chr4:64336068-64336169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-111
               

               Cow position:
               chr4:30944165-30944063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr4:50494987-50494837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               18-101
               

               Cow position:
               chr4:63293660-63293577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               74
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-160
               

               Cow position:
               chr4:22138025-22138155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               1-158
               

               Cow position:
               chr5:57398997-57399152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               2-101
               

               Cow position:
               chr5:19626829-19626730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr5:60514774-60514930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 138
               

               Conread position:
               6-106
               

               Cow position:
               chr5:29831268-29831368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-182
               

               Cow position:
               chr5:25447136-25446964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               8-159
               

               Cow position:
               chr5:17828230-17828379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               10-110
               

               Cow position:
               chr5:9859132-9859232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-160
               

               Cow position:
               chr5:55783716-55783864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               11-132
               

               Cow position:
               chr5:39815256-39815377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               12-111
               

               Cow position:
               chr5:8149066-8149165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-154
               

               Cow position:
               chr5:74690014-74690149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               17-173
               

               Cow position:
               chr5:44582522-44582683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               25-181
               

               Cow position:
               chr5:12902149-12901997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               29-160
               

               Cow position:
               chr5:54712842-54712971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr6:8186919-8187075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               1-160
               

               Cow position:
               chr6:3952788-3952631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr6:26764555-26764715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               119, 142
               

               Conread position:
               1-160
               

               Cow position:
               chr6:43906414-43906571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr6:54828052-54828210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 134
               

               Conread position:
               8-164
               

               Cow position:
               chr6:16411873-16411719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               9-156
               

               Cow position:
               chr6:21004939-21004793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               9-160
               

               Cow position:
               chr6:35984875-35985024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               11-160
               

               Cow position:
               chr6:16137510-16137658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               13-160
               

               Cow position:
               chr6:19936313-19936457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               29-160
               

               Cow position:
               chr6:3937026-3936895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               3-148
               

               Cow position:
               chr7:49941865-49942007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-159
               

               Cow position:
               chr7:39093656-39093810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               7-111
               

               Cow position:
               chr7:28150218-28150322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-160
               

               Cow position:
               chr7:53673527-53673676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               8-164
               

               Cow position:
               chr7:14496358-14496512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               9-106
               

               Cow position:
               chr7:35096761-35096858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr7:30290686-30290830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               12-160
               

               Cow position:
               chr7:36665587-36665436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               13-160
               

               Cow position:
               chr7:17750580-17750727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               16-160
               

               Cow position:
               chr7:35088914-35088772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 110
               

               Conread position:
               1-103
               

               Cow position:
               chr8:43153435-43153537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-106
               

               Cow position:
               chr8:11733972-11733865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-111
               

               Cow position:
               chr8:43220-43110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chr8:28322209-28322054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               116, 132
               

               Conread position:
               5-155
               

               Cow position:
               chr8:5173050-5173196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               7-111
               

               Cow position:
               chr8:36771211-36771107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-160
               

               Cow position:
               chr8:27731272-27731121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               8-160
               

               Cow position:
               chr8:5665457-5665610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               111, 135
               

               Conread position:
               11-160
               

               Cow position:
               chr8:32332243-32332390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               13-110
               

               Cow position:
               chr8:30728536-30728635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               13-154
               

               Cow position:
               chr8:5385456-5385595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               34-155
               

               Cow position:
               chr8:3423211-3423093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr9:41470299-41470147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 134
               

               Conread position:
               1-155
               

               Cow position:
               chr9:48046335-48046489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 136
               

               Conread position:
               1-160
               

               Cow position:
               chr9:52755050-52754894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               4-110
               

               Cow position:
               chr9:42986508-42986402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-158
               

               Cow position:
               chr9:19657167-19657022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               6-160
               

               Cow position:
               chr9:26477019-26477172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               7-104
               

               Cow position:
               chr9:63184935-63185033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               7-137
               

               Cow position:
               chr9:28156508-28156638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-160
               

               Cow position:
               chr9:31344801-31344651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               8-172
               

               Cow position:
               chr9:63710966-63711128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               9-102
               

               Cow position:
               chr9:41701254-41701347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-111
               

               Cow position:
               chr9:28747708-28747606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-108
               

               Cow position:
               chr9:48016801-48016898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-164
               

               Cow position:
               chr9:28315238-28315389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 129
               

               Conread position:
               14-106
               

               Cow position:
               chr9:30653240-30653150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               30-158
               

               Cow position:
               chr9:12495045-12495171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               114-244
               

               Cow position:
               chr9:59522067-59522198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               249-401
               

               Cow position:
               chr9:59522236-59522375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               506-839
               

               Cow position:
               chr9:59522914-59523272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-160
               

               Cow position:
               chrX:12095513-12095672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               2-106
               

               Cow position:
               chrX:22134765-22134870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-155
               

               Cow position:
               chrX:19000382-19000231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 133
               

               Conread position:
               3-111
               

               Cow position:
               chrX:14135929-14135821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-111
               

               Cow position:
               chrX:27668708-27668815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-139
               

               Cow position:
               chrX:17231991-17231855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               chrX:1938267-1938114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               3-160
               

               Cow position:
               chrX:22284093-22283937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               4-95
               

               Cow position:
               chrX:16836041-16836132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-164
               

               Cow position:
               chrX:47100342-47100501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               7-111
               

               Cow position:
               chrX:51653-51756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               7-160
               

               Cow position:
               chrX:8642295-8642144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               9-146
               

               Cow position:
               chrX:23185089-23185224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               9-160
               

               Cow position:
               chrX:34193832-34193981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               11-158
               

               Cow position:
               chrX:35285420-35285275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               16-158
               

               Cow position:
               chrX:19356705-19356565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               17-160
               

               Cow position:
               chrX:4399358-4399219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               19-112
               

               Cow position:
               chrX:23733023-23732930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-179
               

               Cow position:
               chrX:42159180-42159022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 0
Conread position:	1-128
Cow position:	chr1:21561253-21561126 (view UCSC Genome Browser custom track)
Alignm length:	128
Alignm identity:	97
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-139
Cow position:	chr1:31764845-31764984 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	106
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	27, 127
Conread position:	1-144
Cow position:	chr1:38706621-38706759 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	112
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	28, 0
Conread position:	1-160
Cow position:	chr1:64803864-64804023 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	118
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	118, 130
Conread position:	2-122
Cow position:	chr1:83677090-83677213 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	97
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	26, 0
Conread position:	2-126
Cow position:	chr1:95514072-95513948 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	95
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	2-158
Cow position:	chr1:89146640-89146794 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	115
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	132, 0
Conread position:	3-108
Cow position:	chr1:12390251-12390356 (view UCSC Genome Browser custom track)
Alignm length:	109
Alignm identity:	91
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	29, 59
Conread position:	3-159
Cow position:	chr1:1496296-1496452 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	116
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	94, 111
Conread position:	3-178
Cow position:	chr1:25076000-25076176 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	124
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	113, 138
Conread position:	4-132
Cow position:	chr1:42175959-42175832 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	104
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	28, 110
Conread position:	5-104
Cow position:	chr1:42537073-42537171 (view UCSC Genome Browser custom track)
Alignm length:	100
Alignm identity:	84
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	24, 0
Conread position:	5-158
Cow position:	chr1:72422177-72422328 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	113
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	129, 0
Conread position:	6-160
Cow position:	chr1:95153102-95152950 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	115
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	113, 121
Conread position:	8-160
Cow position:	chr1:22824135-22823984 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	112
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	98, 127
Conread position:	9-104
Cow position:	chr1:196781-196876 (view UCSC Genome Browser custom track)
Alignm length:	96
Alignm identity:	81
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	11-100
Cow position:	chr1:66306392-66306303 (view UCSC Genome Browser custom track)
Alignm length:	90
Alignm identity:	77
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	12-159
Cow position:	chr1:60403991-60403846 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	108
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	122, 0
Conread position:	18-160
Cow position:	chr1:54258787-54258645 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	109
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	22, 118
Conread position:	19-160
Cow position:	chr1:77685763-77685902 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	105
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	94, 0