Cow genome map
| Conread name: | Ss1.1-rlin25_b13.5 |
| Conread position: | 10-672 |
| Cow position: | chr1:98865141-98864442 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 63 |
| Conread position: | 27-312 |
| Cow position: | chr1:63501467-63501769 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 47-333 |
| Cow position: | chr1:44101712-44101426 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 70-428 |
| Cow position: | chr1:99020904-99020546 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 212 |
| Conread position: | 71-304 |
| Cow position: | chr1:19992625-19992383 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 207 |
| Conread position: | 76-307 |
| Cow position: | chr1:30027484-30027239 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 201 |
| Conread position: | 76-638 |
| Cow position: | chr1:31422198-31421649 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 396 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 132 |
| Conread position: | 105-671 |
| Cow position: | chr1:38396325-38396871 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 389-665 |
| Cow position: | chr1:33389138-33389405 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 195, 39 |
| Conread position: | 413-661 |
| Cow position: | chr1:44101326-44101084 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 415-672 |
| Cow position: | chr1:73011150-73011399 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 215, 28 |
| Conread position: | 10-304 |
| Cow position: | chr10:20396749-20397040 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 31-368 |
| Cow position: | chr10:62778390-62778748 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 69-657 |
| Cow position: | chr10:24978057-24977452 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 69-672 |
| Cow position: | chr10:6260718-6260093 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 219 |
| Conread position: | 75-523 |
| Cow position: | chr10:11820418-11820903 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 211 |
| Conread position: | 118-491 |
| Cow position: | chr10:39880916-39880517 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 231-670 |
| Cow position: | chr10:64302883-64302443 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 415-649 |
| Cow position: | chr10:64288603-64288381 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 195, 28 |
| Conread position: | 535-672 |
| Cow position: | chr10:11820951-11821089 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 1-657 |
| Cow position: | chr11:13067386-13066734 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 217 |
| Conread position: | 12-658 |
| Cow position: | chr11:44230763-44231446 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 69-583 |
| Cow position: | chr11:30187011-30187529 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 181 |
| Conread position: | 69-585 |
| Cow position: | chr11:13162699-13163200 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 135 |
| Conread position: | 69-671 |
| Cow position: | chr11:36761810-36762413 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 206 |
| Conread position: | 387-670 |
| Cow position: | chr11:36713433-36713158 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 231, 37 |
| Conread position: | 412-671 |
| Cow position: | chr12:17976840-17977095 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 70-655 |
| Cow position: | chr13:21131105-21131712 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 71-311 |
| Cow position: | chr13:22185949-22185695 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 340-669 |
| Cow position: | chr13:34048321-34048641 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 293, 103 |
| Conread position: | 388-569 |
| Cow position: | chr13:30261864-30262048 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 412-671 |
| Cow position: | chr13:22185460-22185217 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 464-634 |
| Cow position: | chr13:31556901-31556740 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-605 |
| Cow position: | chr14:30707101-30706467 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 288 |
| Conread position: | 75-671 |
| Cow position: | chr14:38816540-38815915 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 204 |
| Conread position: | 79-309 |
| Cow position: | chr14:32534076-32533842 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 136-657 |
| Cow position: | chr14:34044274-34043751 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 299-570 |
| Cow position: | chr14:42123043-42122787 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 388-670 |
| Cow position: | chr14:33487568-33487838 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 245, 31 |
| Conread position: | 10-672 |
| Cow position: | chr15:20357694-20357005 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 286 |
| Conread position: | 72-295 |
| Cow position: | chr15:4733523-4733764 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 197 |
| Conread position: | 118-661 |
| Cow position: | chr15:30810345-30810894 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 126-670 |
| Cow position: | chr15:498110-498651 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 386-664 |
| Cow position: | chr15:7788078-7787810 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 203, 32 |
| Conread position: | 60-670 |
| Cow position: | chr16:28438484-28437853 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 69-569 |
| Cow position: | chr16:24155132-24154608 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 132 |
| Conread position: | 387-551 |
| Cow position: | chr16:41757255-41757105 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 387-661 |
| Cow position: | chr16:25170607-25170868 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 413-672 |
| Cow position: | chr16:29091006-29090762 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 161, 29 |
| Conread position: | 528-671 |
| Cow position: | chr16:41756908-41756766 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 211-657 |
| Cow position: | chr17:15383944-15384373 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 413-672 |
| Cow position: | chr17:13893622-13893379 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 211-672 |
| Cow position: | chr18:4885319-4884857 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 1-439 |
| Cow position: | chr19:20111218-20110763 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 338-672 |
| Cow position: | chr19:32183063-32182742 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 296, 44 |
| Conread position: | 1-656 |
| Cow position: | chr2:45968877-45968183 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 4-303 |
| Cow position: | chr2:5481186-5480871 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 103, 275 |
| Conread position: | 7-551 |
| Cow position: | chr2:45921788-45921213 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 72-307 |
| Cow position: | chr2:72108983-72108743 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 75-459 |
| Cow position: | chr2:15580433-15580030 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 288 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 123-672 |
| Cow position: | chr2:63977520-63978089 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 413-666 |
| Cow position: | chr2:77208578-77208828 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 268-655 |
| Cow position: | chr20:18325269-18324886 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 105-502 |
| Cow position: | chr21:23601414-23601819 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 209-495 |
| Cow position: | chr21:25974593-25974878 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 434-672 |
| Cow position: | chr21:37292756-37292988 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 39-357 |
| Cow position: | chr22:8874967-8875310 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 69-312 |
| Cow position: | chr22:35943200-35942942 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 211 |
| Conread position: | 69-672 |
| Cow position: | chr22:36581171-36580557 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 207 |
| Conread position: | 273-507 |
| Cow position: | chr22:36552880-36552652 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 327-665 |
| Cow position: | chr22:36591531-36591207 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 147 |
| Conread position: | 338-672 |
| Cow position: | chr22:298017-297691 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 297, 49 |
| Conread position: | 389-671 |
| Cow position: | chr22:8875568-8875853 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 390-672 |
| Cow position: | chr22:292504-292228 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 53 |
| Conread position: | 527-671 |
| Cow position: | chr22:36552348-36552206 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 60-282 |
| Cow position: | chr23:25684064-25683826 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 222 |
| Conread position: | 69-617 |
| Cow position: | chr23:13509072-13509617 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 69-672 |
| Cow position: | chr23:26836285-26836904 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 71-304 |
| Cow position: | chr23:6216581-6216831 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 69-665 |
| Cow position: | chr24:14873261-14872663 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 218 |
| Conread position: | 402-665 |
| Cow position: | chr24:6048656-6048908 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 338-657 |
| Cow position: | chr25:3378382-3378077 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 69-669 |
| Cow position: | chr28:5800674-5801273 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 210 |
| Conread position: | 294-672 |
| Cow position: | chr28:29436954-29436580 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 330-670 |
| Cow position: | chr28:10230277-10229928 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 1-672 |
| Cow position: | chr29:16017211-16016505 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 1-650 |
| Cow position: | chr3:21305328-21304640 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 220 |
| Conread position: | 1-672 |
| Cow position: | chr3:64821478-64822145 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 68-639 |
| Cow position: | chr3:18729207-18728628 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 379 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 72-303 |
| Cow position: | chr3:5829691-5829442 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 198 |
| Conread position: | 123-506 |
| Cow position: | chr3:49601943-49601554 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 338-560 |
| Cow position: | chr3:37624529-37624737 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 338-672 |
| Cow position: | chr3:70886984-70887304 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 260, 45 |
| Conread position: | 387-672 |
| Cow position: | chr3:31415420-31415705 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 56 |
| Conread position: | 1-207 |
| Cow position: | chr4:24198550-24198328 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 69-636 |
| Cow position: | chr4:4176168-4176756 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 204 |
| Conread position: | 69-672 |
| Cow position: | chr4:1497020-1496410 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 215 |
| Conread position: | 267-655 |
| Cow position: | chr4:44925954-44925573 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 338-636 |
| Cow position: | chr4:32622025-32622307 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 343-672 |
| Cow position: | chr4:968981-968661 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 533-672 |
| Cow position: | chr4:27295902-27295758 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 392-672 |
| Cow position: | chr5:58055275-58055010 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 251, 51 |
| Conread position: | 108-608 |
| Cow position: | chr6:6542978-6543490 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 166 |
| Conread position: | 244-584 |
| Cow position: | chr6:69142200-69142532 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 111 |
| Conread position: | 390-671 |
| Cow position: | chr6:10630898-10631180 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 184 |
| Conread position: | 415-657 |
| Cow position: | chr6:31637576-31637344 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 219, 27 |
| Conread position: | 419-672 |
| Cow position: | chr6:35434112-35434354 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 217, 24 |
| Conread position: | 68-219 |
| Cow position: | chr7:65496743-65496589 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 69-479 |
| Cow position: | chr7:30119478-30119063 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 70-670 |
| Cow position: | chr7:19048824-19048250 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 187 |
| Conread position: | 177-672 |
| Cow position: | chr7:26851482-26851979 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 192-671 |
| Cow position: | chr7:30302438-30302914 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 23 |
| Conread position: | 444-672 |
| Cow position: | chr7:41876191-41875966 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 1-261 |
| Cow position: | chr8:24876546-24876256 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 79-546 |
| Cow position: | chr8:51327832-51328323 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 331 |
| Conread position: | 244-657 |
| Cow position: | chr8:16084801-16085209 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 388-672 |
| Cow position: | chr8:38578162-38577888 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 390-666 |
| Cow position: | chr8:38586081-38585818 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 187, 53 |
| Conread position: | 436-671 |
| Cow position: | chr8:24874871-24874633 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 1-672 |
| Cow position: | chr9:29328122-29328798 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 47-304 |
| Cow position: | chr9:64159001-64159276 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 68-661 |
| Cow position: | chr9:3726178-3726815 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 123 |
| Conread position: | 69-661 |
| Cow position: | chr9:3394080-3393482 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 212 |
| Conread position: | 298-655 |
| Cow position: | chr9:64159301-64159649 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 387-672 |
| Cow position: | chr9:59511232-59511523 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 56 |
| Conread position: | 68-303 |
| Cow position: | chrX:21632779-21632524 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 215 |
| Conread position: | 68-309 |
| Cow position: | chrX:17632015-17631760 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 211 |
| Conread position: | 294-505 |
| Cow position: | chrX:6251194-6250987 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 338-672 |
| Cow position: | chrX:2012917-2012604 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 253, 27 |
| Conread position: | 388-672 |
| Cow position: | chrX:10417539-10417262 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 241, 52 |
| Conread position: | 432-672 |
| Cow position: | chrX:13417599-13417372 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 205, 11 |
| Conread position: | 434-672 |
| Cow position: | chrX:29814649-29814899 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 475-672 |
| Cow position: | chrX:41889111-41888907 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 527-672 |
| Cow position: | chrX:6250536-6250389 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 98, 0 |