Cow genome map
| Conread name: | Ss1.1-rlnt05c_f13.5 |
| Conread position: | 271-415 |
| Cow position: | chr1:62181599-62181743 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 74 |
| Conread position: | 90-415 |
| Cow position: | chr10:30452518-30452196 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 114 |
| Conread position: | 69-289 |
| Cow position: | chr11:41518805-41518587 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 56 |
| Conread position: | 280-444 |
| Cow position: | chr11:41518520-41518360 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 9-483 |
| Cow position: | chr12:47864030-47863567 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 17 |
| Conread position: | 99-447 |
| Cow position: | chr14:42734370-42734697 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 44-157 |
| Cow position: | chr16:34950438-34950550 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 150-283 |
| Cow position: | chr16:34952706-34952840 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 273-462 |
| Cow position: | chr16:34955424-34955609 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 11-331 |
| Cow position: | chr18:28248782-28249098 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 318-459 |
| Cow position: | chr18:28249305-28249445 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 11-492 |
| Cow position: | chr19:13019560-13020026 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 90-397 |
| Cow position: | chr19:8337056-8337365 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 139, 110 |
| Conread position: | 10-432 |
| Cow position: | chr2:74140350-74139932 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 90-415 |
| Cow position: | chr21:36879100-36879422 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 261, 114 |
| Conread position: | 9-476 |
| Cow position: | chr25:17721775-17721321 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 111-417 |
| Cow position: | chr3:27551300-27551597 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 90-415 |
| Cow position: | chr5:25450684-25450361 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 114 |
| Conread position: | 4-417 |
| Cow position: | chr6:25139957-25139559 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 135-397 |
| Cow position: | chr8:33090541-33090793 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 216, 69 |