Cow genome map
| Conread name: | Ss1.1-rlyg19_c21.5 |
| Conread position: | 426-673 |
| Cow position: | chr1:71448568-71448323 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 440-668 |
| Cow position: | chr1:74980638-74980867 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 446-658 |
| Cow position: | chr1:59406220-59406431 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 448-668 |
| Cow position: | chr1:21932318-21932535 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 448-668 |
| Cow position: | chr1:43691856-43692075 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 448-682 |
| Cow position: | chr1:71740167-71739933 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 450-668 |
| Cow position: | chr1:78967962-78968179 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 451-668 |
| Cow position: | chr1:50936413-50936634 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 189 |
| Conread position: | 456-668 |
| Cow position: | chr1:87432611-87432821 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 463-671 |
| Cow position: | chr1:86878085-86878298 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 432-658 |
| Cow position: | chr10:47984052-47984281 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 433-680 |
| Cow position: | chr10:6845570-6845321 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 437-683 |
| Cow position: | chr10:4553011-4553258 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 444-656 |
| Cow position: | chr10:53209968-53210178 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 444-681 |
| Cow position: | chr10:46085383-46085142 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 196 |
| Conread position: | 446-665 |
| Cow position: | chr10:59001413-59001633 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 448-684 |
| Cow position: | chr10:25478412-25478178 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 201, 53 |
| Conread position: | 449-671 |
| Cow position: | chr10:63650841-63651066 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 49 |
| Conread position: | 459-668 |
| Cow position: | chr10:47989263-47989059 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 462-682 |
| Cow position: | chr10:54155653-54155878 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 432-619 |
| Cow position: | chr11:21757470-21757282 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 448-668 |
| Cow position: | chr11:54468224-54468446 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 448-675 |
| Cow position: | chr11:5429842-5429612 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 650-984 |
| Cow position: | chr11:10750148-10750502 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 133 |
| Conread position: | 448-619 |
| Cow position: | chr12:26778358-26778184 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 448-685 |
| Cow position: | chr12:39797265-39797026 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 182 |
| Conread position: | 458-658 |
| Cow position: | chr12:35538291-35538090 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 371-676 |
| Cow position: | chr13:31415546-31415242 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 5 |
| Conread position: | 439-612 |
| Cow position: | chr13:56202923-56203097 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 448-668 |
| Cow position: | chr13:46717802-46718021 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 198, 31 |
| Conread position: | 448-671 |
| Cow position: | chr13:34502219-34501992 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 448-673 |
| Cow position: | chr13:13252171-13251941 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 448-692 |
| Cow position: | chr13:33914587-33914816 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 427-681 |
| Cow position: | chr14:38308012-38308275 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 433-667 |
| Cow position: | chr14:29709791-29709551 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 435-658 |
| Cow position: | chr14:19008043-19007813 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 448-617 |
| Cow position: | chr14:13320644-13320476 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 448-668 |
| Cow position: | chr14:14318286-14318066 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 448-668 |
| Cow position: | chr14:18127197-18126974 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 448-684 |
| Cow position: | chr14:10054811-10054573 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 451-682 |
| Cow position: | chr14:35063717-35063481 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 426-627 |
| Cow position: | chr15:8261440-8261239 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 431-681 |
| Cow position: | chr15:23675870-23676113 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 440-675 |
| Cow position: | chr15:4987686-4987447 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 442-668 |
| Cow position: | chr15:50946684-50946454 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 444-668 |
| Cow position: | chr15:25271322-25271547 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 444-678 |
| Cow position: | chr15:40140741-40140968 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 446-586 |
| Cow position: | chr15:30763134-30763274 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 448-667 |
| Cow position: | chr15:15121616-15121836 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 441-672 |
| Cow position: | chr16:26693029-26692800 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 448-636 |
| Cow position: | chr16:43699564-43699751 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 448-668 |
| Cow position: | chr16:3234367-3234148 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 471-676 |
| Cow position: | chr16:16386403-16386606 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 435-672 |
| Cow position: | chr17:34151543-34151786 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 442-623 |
| Cow position: | chr17:29971874-29972057 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 448-677 |
| Cow position: | chr17:8532819-8533042 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 211, 28 |
| Conread position: | 450-666 |
| Cow position: | chr17:11737154-11737368 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 191, 20 |
| Conread position: | 437-640 |
| Cow position: | chr18:44465194-44464989 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 447-668 |
| Cow position: | chr18:24714005-24714227 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 204, 55 |
| Conread position: | 447-678 |
| Cow position: | chr18:23457595-23457363 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 449-651 |
| Cow position: | chr18:26002496-26002294 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 432-671 |
| Cow position: | chr19:20647774-20648010 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 439-599 |
| Cow position: | chr19:4359040-4359197 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 444-671 |
| Cow position: | chr2:70177255-70177028 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 207, 49 |
| Conread position: | 447-579 |
| Cow position: | chr2:3984332-3984202 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 448-586 |
| Cow position: | chr2:22775853-22775989 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 448-646 |
| Cow position: | chr2:21040882-21041073 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 448-666 |
| Cow position: | chr2:18163901-18163682 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 449-666 |
| Cow position: | chr2:61085938-61085719 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 415-678 |
| Cow position: | chr20:29571192-29570928 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 448-658 |
| Cow position: | chr20:28061607-28061818 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 448-671 |
| Cow position: | chr20:3395094-3394872 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 420-671 |
| Cow position: | chr21:44862606-44862851 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 9 |
| Conread position: | 423-585 |
| Cow position: | chr21:17778258-17778418 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 441-671 |
| Cow position: | chr21:45301198-45300973 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 208, 30 |
| Conread position: | 446-607 |
| Cow position: | chr21:26877833-26877675 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 448-695 |
| Cow position: | chr21:32325242-32325492 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 451-660 |
| Cow position: | chr21:34927732-34927943 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 180 |
| Conread position: | 455-672 |
| Cow position: | chr21:28564068-28563850 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 430-668 |
| Cow position: | chr22:24056835-24057076 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 440-675 |
| Cow position: | chr22:37186384-37186151 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 444-682 |
| Cow position: | chr22:36258800-36259037 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 447-672 |
| Cow position: | chr22:23791045-23791272 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 53 |
| Conread position: | 448-614 |
| Cow position: | chr22:1558889-1558724 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 393-696 |
| Cow position: | chr23:29025372-29025066 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 455-612 |
| Cow position: | chr23:29274276-29274118 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 462-658 |
| Cow position: | chr23:10879256-10879058 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 412-668 |
| Cow position: | chr24:9819306-9819562 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 446-692 |
| Cow position: | chr24:28948226-28948481 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 449-658 |
| Cow position: | chr24:21704955-21705167 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 441-668 |
| Cow position: | chr25:35253510-35253737 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 451-658 |
| Cow position: | chr25:22188278-22188483 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 196, 47 |
| Conread position: | 1-984 |
| Cow position: | chr26:26488181-26487197 (view UCSC Genome Browser custom track) |
| Alignm length: | 1018 |
| Alignm identity: | 823 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 170 |
| Conread position: | 435-671 |
| Cow position: | chr26:27506478-27506242 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 455-668 |
| Cow position: | chr26:26474092-26473882 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 438-631 |
| Cow position: | chr27:7869583-7869776 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 448-668 |
| Cow position: | chr27:21171600-21171820 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 459-671 |
| Cow position: | chr27:24160637-24160853 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 167 |
| Conread position: | 441-665 |
| Cow position: | chr28:15578782-15578542 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 184 |
| Conread position: | 441-675 |
| Cow position: | chr28:22841774-22841538 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 414-668 |
| Cow position: | chr29:45388094-45387840 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 437-628 |
| Cow position: | chr29:38334611-38334804 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 445-667 |
| Cow position: | chr29:44590012-44590237 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 448-625 |
| Cow position: | chr29:40495061-40495239 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 448-671 |
| Cow position: | chr29:36297647-36297870 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 418-627 |
| Cow position: | chr3:53417663-53417877 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 441-671 |
| Cow position: | chr3:3665518-3665286 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 444-675 |
| Cow position: | chr3:26709939-26710179 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 446-671 |
| Cow position: | chr3:56199869-56199641 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 448-668 |
| Cow position: | chr3:50418238-50418450 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 448-675 |
| Cow position: | chr3:8401572-8401342 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 448-682 |
| Cow position: | chr3:12752685-12752921 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 451-681 |
| Cow position: | chr3:14798048-14798286 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 459-615 |
| Cow position: | chr3:75035595-75035442 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 484-668 |
| Cow position: | chr3:57365517-57365336 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 165, 14 |
| Conread position: | 437-671 |
| Cow position: | chr4:49836307-49836540 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 439-600 |
| Cow position: | chr4:15234985-15235146 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 441-668 |
| Cow position: | chr4:6076100-6075875 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 445-667 |
| Cow position: | chr4:7998254-7998474 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 446-737 |
| Cow position: | chr4:9643288-9643001 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 447-593 |
| Cow position: | chr4:12800215-12800361 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 448-620 |
| Cow position: | chr4:9361018-9361190 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 440-647 |
| Cow position: | chr5:29126919-29127120 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 446-658 |
| Cow position: | chr5:28989162-28988951 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 448-668 |
| Cow position: | chr5:29779389-29779610 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 448-668 |
| Cow position: | chr5:68369427-68369648 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 448-691 |
| Cow position: | chr5:36441284-36441525 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 448-702 |
| Cow position: | chr5:37162325-37162075 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 447-658 |
| Cow position: | chr6:42473379-42473591 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 447-668 |
| Cow position: | chr7:10013824-10014048 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 448-671 |
| Cow position: | chr7:4757829-4758052 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 462-682 |
| Cow position: | chr7:40434795-40435019 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 471-594 |
| Cow position: | chr7:30654641-30654520 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 446-669 |
| Cow position: | chr8:49796301-49796064 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 448-657 |
| Cow position: | chr8:47360298-47360088 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 448-657 |
| Cow position: | chr8:49504176-49503969 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 448-674 |
| Cow position: | chr8:6034927-6034703 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 450-630 |
| Cow position: | chr8:49495080-49494901 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 433-666 |
| Cow position: | chr9:84903-85136 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 434-674 |
| Cow position: | chr9:14551008-14551247 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 437-671 |
| Cow position: | chr9:17056337-17056571 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 440-607 |
| Cow position: | chr9:17805048-17804884 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 442-668 |
| Cow position: | chr9:30152165-30152391 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 448-621 |
| Cow position: | chr9:19699605-19699775 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 448-669 |
| Cow position: | chr9:33680399-33680172 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 448-688 |
| Cow position: | chr9:20214368-20214614 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 440-658 |
| Cow position: | chrX:18151459-18151677 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 441-597 |
| Cow position: | chrX:38194541-38194695 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 446-667 |
| Cow position: | chrX:20946809-20947037 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 446-682 |
| Cow position: | chrX:3617972-3617732 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 448-659 |
| Cow position: | chrX:33713787-33714000 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 448-668 |
| Cow position: | chrX:5382246-5382026 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 448-668 |
| Cow position: | chrX:37229441-37229220 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 506-668 |
| Cow position: | chrX:40321257-40321093 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 0 |