Cow genome map
| Conread name: | Ss1.1-rlyg21_m14.5 |
| Conread position: | 2-301 |
| Cow position: | chr11:67335559-67335257 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 299 |
| Conread position: | 311-679 |
| Cow position: | chr11:67335081-67334705 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 724-1251 |
| Cow position: | chr11:67334697-67334163 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 1-291 |
| Cow position: | chr12:15179397-15179110 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 115 |
| Conread position: | 2-292 |
| Cow position: | chr12:6066064-6065767 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 247 |
| Conread position: | 1-292 |
| Cow position: | chr13:25791616-25791913 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 43 |
| Conread position: | 62-292 |
| Cow position: | chr13:56870338-56870567 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-292 |
| Cow position: | chr14:13032419-13032714 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 1-284 |
| Cow position: | chr16:27091995-27092285 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 248 |
| Conread position: | 1-292 |
| Cow position: | chr16:3685792-3686086 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 179-292 |
| Cow position: | chr16:38398310-38398422 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-292 |
| Cow position: | chr18:8425558-8425852 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 1-292 |
| Cow position: | chr19:43278028-43278327 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 112 |
| Conread position: | 128-292 |
| Cow position: | chr19:55161385-55161557 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-292 |
| Cow position: | chr2:58551544-58551245 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 115 |
| Conread position: | 1-292 |
| Cow position: | chr20:312299-312023 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 40-292 |
| Cow position: | chr20:17264823-17264565 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 77 |
| Conread position: | 101-292 |
| Cow position: | chr20:4657545-4657346 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 1-292 |
| Cow position: | chr23:34558571-34558272 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 1-292 |
| Cow position: | chr26:1633707-1633409 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 1-292 |
| Cow position: | chr26:30589999-30590297 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 1-292 |
| Cow position: | chr28:7800693-7800399 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 128-292 |
| Cow position: | chr28:18654129-18653962 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 117 |
| Conread position: | 1-292 |
| Cow position: | chr29:257006-256708 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 177-292 |
| Cow position: | chr3:6903789-6903676 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 196-292 |
| Cow position: | chr4:16805934-16805838 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-292 |
| Cow position: | chr5:55307153-55307448 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 1-210 |
| Cow position: | chr7:68712409-68712196 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 1-291 |
| Cow position: | chr7:18119862-18120151 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 112 |
| Conread position: | 1-292 |
| Cow position: | chr8:47486239-47486537 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 112 |
| Conread position: | 164-282 |
| Cow position: | chr8:10404481-10404598 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 17-292 |
| Cow position: | chr9:15038849-15039131 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 128-292 |
| Cow position: | chrX:3399491-3399323 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 0 |