Cow genome map
| Conread name: | Ss1.1-rmed14c_i18.5 |
| Conread position: | 997-1811 |
| Cow position: | chr1:36267827-36267014 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 743 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 637, 415 |
| Conread position: | 997-1821 |
| Cow position: | chr11:75297792-75298614 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 728 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 637, 111 |
| Conread position: | 15-109 |
| Cow position: | chr13:34309044-34309138 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-223 |
| Cow position: | chr13:34309493-34309616 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 115 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 209-383 |
| Cow position: | chr13:34310209-34310383 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-595 |
| Cow position: | chr13:34310521-34310741 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 579-770 |
| Cow position: | chr13:34311064-34311255 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 743-923 |
| Cow position: | chr13:34311308-34311489 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 921-996 |
| Cow position: | chr13:34311674-34311749 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1019-1171 |
| Cow position: | chr13:34312139-34312291 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1171-1294 |
| Cow position: | chr13:34312511-34312634 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 120 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1291-1443 |
| Cow position: | chr13:34312817-34312966 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 133 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 1430-1811 |
| Cow position: | chr13:34313640-34314023 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 23 |
| Conread position: | 1085-1917 |
| Cow position: | chr14:39739432-39738590 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 687 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 295 |
| Conread position: | 1239-1816 |
| Cow position: | chr18:40441327-40440751 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 16 |
| Conread position: | 1410-1816 |
| Cow position: | chr18:15555645-15555245 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 43 |
| Conread position: | 1058-1754 |
| Cow position: | chr19:28334661-28333978 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 286 |
| Conread position: | 997-1433 |
| Cow position: | chr2:55105389-55104972 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 13 |
| Conread position: | 1465-1766 |
| Cow position: | chr2:55104871-55104567 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 49 |
| Conread position: | 1000-1919 |
| Cow position: | chr20:24339055-24338158 (view UCSC Genome Browser custom track) |
| Alignm length: | 934 |
| Alignm identity: | 759 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 116 |
| Conread position: | 997-1483 |
| Cow position: | chr21:12307833-12307352 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 409 |
| Conread position: | 1135-1911 |
| Cow position: | chr21:36496845-36496087 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 669 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 499, 98 |
| Conread position: | 1477-1690 |
| Cow position: | chr21:12307150-12306934 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 108 |
| Conread position: | 1680-1775 |
| Cow position: | chr21:12306693-12306599 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 998-1816 |
| Cow position: | chr22:31940165-31940979 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 662 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 635, 68 |
| Conread position: | 1333-1804 |
| Cow position: | chr5:75873751-75874212 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 105 |
| Conread position: | 997-1821 |
| Cow position: | chr6:56859048-56859856 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 711 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 142 |
| Conread position: | 1599-1912 |
| Cow position: | chr6:36859829-36859517 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 998-1175 |
| Cow position: | chr8:8715512-8715687 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1181-1821 |
| Cow position: | chr8:8715938-8716564 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 453, 8 |
| Conread position: | 999-1821 |
| Cow position: | chr9:27440699-27441512 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 717 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 363 |