Cow genome map
| Conread name: | Ss1.1-rmgp31_j22.5.5 |
| Conread position: | 4-402 |
| Cow position: | chr11:39497666-39498055 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 227-397 |
| Cow position: | chr11:15620758-15620923 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-427 |
| Cow position: | chr13:11745264-11745679 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 28-199 |
| Cow position: | chr13:57317701-57317872 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-456 |
| Cow position: | chr13:54646199-54645782 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 105 |
| Conread position: | 6-449 |
| Cow position: | chr14:2794563-2794982 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 60-354 |
| Cow position: | chr17:44555836-44555554 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 2-362 |
| Cow position: | chr18:36287239-36287596 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 38 |
| Conread position: | 266-452 |
| Cow position: | chr18:1582065-1581891 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 91 |
| Conread position: | 5-432 |
| Cow position: | chr19:12317369-12316957 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 8-435 |
| Cow position: | chr2:30121595-30121176 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 100-432 |
| Cow position: | chr2:4968398-4968073 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 18 |
| Conread position: | 145-351 |
| Cow position: | chr2:33405070-33404865 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 5-449 |
| Cow position: | chr24:21199438-21199859 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 5-438 |
| Cow position: | chr26:8119917-8120320 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 7-275 |
| Cow position: | chr27:23329052-23329318 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 5-446 |
| Cow position: | chr3:63842466-63842033 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 104-314 |
| Cow position: | chr3:70822518-70822309 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 157, 41 |
| Conread position: | 265-397 |
| Cow position: | chr3:58949854-58949983 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 119 |
| Conread position: | 5-394 |
| Cow position: | chr7:533049-533419 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-112 |
| Cow position: | chr8:20217613-20217720 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-400 |
| Cow position: | chr8:32167013-32167364 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 112-238 |
| Cow position: | chr8:20220795-20220921 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 116 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-350 |
| Cow position: | chr8:20222033-20222147 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-263 |
| Cow position: | chr9:35287190-35287441 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 254-401 |
| Cow position: | chr9:35287695-35287834 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-431 |
| Cow position: | chrX:39396157-39396562 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |