Cow genome map
| Conread name: | Ss1.1-rnbm24b_j1.5 |
| Conread position: | 425-1091 |
| Cow position: | chr1:93449641-93450307 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 621 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 417 |
| Conread position: | 24-614 |
| Cow position: | chr10:61341199-61340606 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 0 |
| Conread position: | 24-1088 |
| Cow position: | chr10:48943103-48944184 (view UCSC Genome Browser custom track) |
| Alignm length: | 1086 |
| Alignm identity: | 971 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 159 |
| Conread position: | 50-1091 |
| Cow position: | chr10:55153473-55154473 (view UCSC Genome Browser custom track) |
| Alignm length: | 1051 |
| Alignm identity: | 856 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 130 |
| Conread position: | 638-979 |
| Cow position: | chr10:39534700-39534366 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 27 |
| Conread position: | 988-1091 |
| Cow position: | chr10:61340605-61340502 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-981 |
| Cow position: | chr14:47627053-47628000 (view UCSC Genome Browser custom track) |
| Alignm length: | 981 |
| Alignm identity: | 769 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 102 |
| Conread position: | 87-198 |
| Cow position: | chr14:31296353-31296464 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-2086 |
| Cow position: | chr17:24043169-24041123 (view UCSC Genome Browser custom track) |
| Alignm length: | 2097 |
| Alignm identity: | 1804 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1096, 585 |
| Conread position: | 216-348 |
| Cow position: | chr17:16980143-16980011 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 125 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 283-775 |
| Cow position: | chr17:33803618-33804111 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 215 |
| Conread position: | 416-1089 |
| Cow position: | chr17:16980143-16980818 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 626 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 479, 422 |
| Conread position: | 2083-2324 |
| Cow position: | chr17:24041101-24040875 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 29-1090 |
| Cow position: | chr18:48457317-48458381 (view UCSC Genome Browser custom track) |
| Alignm length: | 1070 |
| Alignm identity: | 964 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 105 |
| Conread position: | 442-730 |
| Cow position: | chr19:21593142-21593417 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 93, 45 |
| Conread position: | 22-197 |
| Cow position: | chr2:78344278-78344105 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 136 |
| Conread position: | 43-278 |
| Cow position: | chr2:68340177-68339948 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 191-554 |
| Cow position: | chr2:78343984-78343625 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 209 |
| Conread position: | 338-1150 |
| Cow position: | chr2:68339949-68339133 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 0 |
| Conread position: | 586-991 |
| Cow position: | chr2:78343626-78343248 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 24-1082 |
| Cow position: | chr20:13333229-13334273 (view UCSC Genome Browser custom track) |
| Alignm length: | 1059 |
| Alignm identity: | 947 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 979-1083 |
| Cow position: | chr25:39160941-39160838 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-187 |
| Cow position: | chr3:16271501-16271685 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 40 |
| Conread position: | 652-975 |
| Cow position: | chr3:16271745-16272063 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 950-1096 |
| Cow position: | chr3:16272295-16272435 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-1094 |
| Cow position: | chr4:39736133-39735040 (view UCSC Genome Browser custom track) |
| Alignm length: | 1096 |
| Alignm identity: | 1010 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 551 |
| Conread position: | 24-1992 |
| Cow position: | chr4:23783933-23785880 (view UCSC Genome Browser custom track) |
| Alignm length: | 2000 |
| Alignm identity: | 1665 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 864, 39 |
| Conread position: | 26-1094 |
| Cow position: | chrX:19693413-19694472 (view UCSC Genome Browser custom track) |
| Alignm length: | 1071 |
| Alignm identity: | 957 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 803, 136 |